RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
PTCH1-201ENST00000331920 RUFY4Q6ZNE9 571 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 CAPN9O14815 690 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 TRIM50Q86XT4 487 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 CFAP61Q8NHU2 1237 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 MAP2K2P36507 400 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 RASIP1Q5U651 963 aa18.14■□□□□ 0.49
PTCH1-201ENST00000331920 IFNB1P01574 187 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 F13A1P00488 732 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 EEF1B2P24534 225 aaKnown RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 ARHGAP44Q17R89 818 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 NR1H4Q96RI1 486 aaPredicted RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 MRPL44Q9H9J2 332 aaKnown RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 ARHGEF35A5YM69 484 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 CNNM4Q6P4Q7 775 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 RSBN1LQ6PCB5 846 aaPredicted RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 MCUQ8NE86 351 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 NACADO15069 1562 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 UBE2Q2Q8WVN8 375 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 CEP19Q96LK0 163 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 RPSAP08865 295 aaKnown RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 KAZNQ674X7 775 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 MYCT1Q8N699 235 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 ZC3H12CQ9C0D7 883 aaKnown RBP18.13■□□□□ 0.49
PTCH1-201ENST00000331920 FIS1Q9Y3D6 152 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 TTC4O95801 387 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 IQUBQ8NA54 791 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 CCDC68Q9H2F9 335 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
PTCH1-201ENST00000331920 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 WIZO95785 1651 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 BEGAINQ9BUH8 593 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 RDH13Q8NBN7 331 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 RGS16O15492 202 aaPredicted RBP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 TMEM259Q4ZIN3 620 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 CAPN7Q9Y6W3 813 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 ELP1O95163 1332 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 KRT71Q3SY84 523 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 CCDC138Q96M89 665 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 NLRP3Q96P20 1036 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 CLTAP09496 248 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 RYBPQ8N488 228 aaPredicted RBP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 FAN1Q9Y2M0 1017 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 FOXO3O43524 673 aa18.12■□□□□ 0.49
PTCH1-201ENST00000331920 S100BP04271 92 aaPredicted RBP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 YARSP54577 528 aaKnown RBP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 SECISBP2LQ93073 1101 aaKnown RBP18.12■□□□□ 0.49
PTCH1-201ENST00000331920 RCN2Q14257 317 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 ADAT2Q7Z6V5 191 aaKnown RBP18.11■□□□□ 0.49
PTCH1-201ENST00000331920 ANAPC5Q9UJX4 755 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 PHLDB3Q6NSJ2 640 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 PEX26Q7Z412 305 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 SYNRGQ9UMZ2 1314 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 TRPA1O75762 1119 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 TNNI1P19237 187 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 RASEFQ8IZ41 740 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 IVNS1ABPQ9Y6Y0 642 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 TRIM27P14373 513 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 FAM180AQ6UWF9 173 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 PIP4K2CQ8TBX8 421 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 EXOC7Q9UPT5 735 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 ANGPTL3Q9Y5C1 460 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
PTCH1-201ENST00000331920 ATF7P17544 494 aaPredicted RBP18.11■□□□□ 0.49
PTCH1-201ENST00000331920 LRCH2Q5VUJ6 765 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 NME8Q8N427 588 aa18.11■□□□□ 0.49
PTCH1-201ENST00000331920 GSTA4O15217 222 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 MAP3K7CLP57077 242 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
PTCH1-201ENST00000331920 LONRF2Q1L5Z9 754 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 CARD6Q9BX69 1037 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 SPC25Q9HBM1 224 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 RNF40O75150 1001 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 SDSP20132 328 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 HELBQ8NG08 1087 aaPredicted RBP18.1■□□□□ 0.49
PTCH1-201ENST00000331920 ELF2Q15723 593 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 MMS19Q96T76 1030 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 UBN1Q9NPG3 1134 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 PHBP35232 272 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 TXKP42681 527 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 SND1Q7KZF4 910 aaKnown RBP eCLIP18.1■□□□□ 0.49
PTCH1-201ENST00000331920 SYNDIG1LA6NDD5 238 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 CDC26Q8NHZ8 85 aa18.1■□□□□ 0.49
PTCH1-201ENST00000331920 LDHBP07195 334 aaKnown RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 KRT10P13645 584 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 CSGALNACT2Q8N6G5 542 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 TEKT2Q9UIF3 430 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 ZKSCAN5Q9Y2L8 839 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 BCRP11274 1271 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 CWF19L2Q2TBE0 894 aaKnown RBP18.09■□□□□ 0.49
PTCH1-201ENST00000331920 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 KIF21BO75037 1637 aa18.09■□□□□ 0.49
PTCH1-201ENST00000331920 ATP1A2P50993 1020 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms