RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 CBLBQ13191 982 aa3.11□□□□□ -1.91
RGPD6-201ENST00000329516 CYHR1Q6ZMK1 362 aa3.11□□□□□ -1.91
RGPD6-201ENST00000329516 REM2Q8IYK8 340 aaPredicted RBP3.11□□□□□ -1.91
RGPD6-201ENST00000329516 PCSK5Q92824 1860 aa3.11□□□□□ -1.91
RGPD6-201ENST00000329516 NPHP3Q7Z494 1330 aa3.11□□□□□ -1.91
RGPD6-201ENST00000329516 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
RGPD6-201ENST00000329516 MIA3Q5JRA6 1907 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 POTECB2RU33 542 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 E9PQ18 207 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 KCNA3P22001 575 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 ATP8B2P98198 1209 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 MICALCLQ6ZW33 695 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 EFCC1Q9HA90 598 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 MAP10Q9P2G4 905 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 ARHGAP28Q9P2N2 729 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 IGKV6D-41A0A0C4DH26 115 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 H7C1D1 291 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 PHF14O94880 888 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 XPCQ01831 940 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 WWC2Q6AWC2 1192 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SEC14L1Q92503 715 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 MAP7D2Q96T17 732 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 GDPD2Q9HCC8 539 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 FRMPD2Q68DX3 1309 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 LTBP2Q14767 1821 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 VWA3AA6NCI4 1184 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SMAPO00193 183 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 TPM2P07951 284 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CYP4V2Q6ZWL3 525 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 NME7Q9Y5B8 376 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 BRWD1Q9NSI6 2320 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 I6L893 689 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CAPNS1P04632 268 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 POLR3DP05423 398 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 TPM3P06753 285 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CDKAL1Q5VV42 579 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 PACS2Q86VP3 889 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 PLEKHO2Q8TD55 490 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 EGLN2Q96KS0 407 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 JPH2Q9BR39 696 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 INHBCP55103 352 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SCRN1Q12765 414 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 MKRN4PQ13434 485 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 TBC1D25Q3MII6 688 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 MPRIPQ6WCQ1 1025 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CYB5R4Q7L1T6 521 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CPNE8Q86YQ8 564 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CDAN1Q8IWY9 1227 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 HOMEZQ8IX15 550 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 TMEM130Q8N3G9 435 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 NSUN7Q8NE18 718 aaKnown RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 UTP4Q969X6 686 aaKnown RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 HOOK1Q9UJC3 728 aaKnown RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 XDHP47989 1333 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SH3TC1Q8TE82 1336 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 CREB5Q02930 508 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SIX1Q15475 284 aaPredicted RBP3.1□□□□□ -1.91
RGPD6-201ENST00000329516 SLC26A8Q96RN1 970 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 COPRSQ9NQ92 184 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
RGPD6-201ENST00000329516 TCRBV5S1A1TA0A578 114 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TPM1P09493 284 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 ATP1A3P13637 1013 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 FOXB2Q5VYV0 432 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TMED8Q6PL24 325 aaPredicted RBP3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TTLL7Q6ZT98 887 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TBC1D10CQ8IV04 446 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 BMP8BP34820 402 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 BMP8AQ7Z5Y6 402 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 RTL9Q8NET4 1388 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 GCAP28676 217 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 NAP1L1P55209 391 aaKnown RBP3.09□□□□□ -1.91
RGPD6-201ENST00000329516 PLCB3Q01970 1234 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TROAPQ12815 778 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 TRIM28Q13263 835 aaKnown RBP3.09□□□□□ -1.91
RGPD6-201ENST00000329516 LRRC24Q50LG9 513 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 MIIPQ5JXC2 388 aa3.09□□□□□ -1.91
RGPD6-201ENST00000329516 IPO8O15397 1037 aaKnown RBP3.09□□□□□ -1.92
RGPD6-201ENST00000329516 NR1I2O75469 434 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 PIP4K2AP48426 406 aaPredicted RBP3.09□□□□□ -1.92
RGPD6-201ENST00000329516 WDR24Q96S15 920 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 ZMYM2Q9UBW7 1377 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 A0A0U1RQG5 324 aaPredicted RBP3.09□□□□□ -1.92
RGPD6-201ENST00000329516 DNTTIP2Q5QJE6 756 aaKnown RBP3.09□□□□□ -1.92
RGPD6-201ENST00000329516 PAF1Q8N7H5 531 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 TC2NQ8N9U0 490 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 SECISBP2LQ93073 1101 aaKnown RBP3.09□□□□□ -1.92
RGPD6-201ENST00000329516 RPS6KL1Q9Y6S9 549 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 NRCAMQ92823 1304 aa3.09□□□□□ -1.92
RGPD6-201ENST00000329516 PUS7LQ9H0K6 701 aaKnown RBP3.08□□□□□ -1.92
RGPD6-201ENST00000329516 NFASCO94856 1347 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 TET1Q8NFU7 2136 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 APBB1O00213 710 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 CYP3A4P08684 503 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 CYP3A7P24462 503 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 ALDH1B1P30837 517 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 MTF1Q14872 753 aa3.08□□□□□ -1.92
RGPD6-201ENST00000329516 C6orf89Q6UWU4 347 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms