RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 TIAM2Q8IVF5 1701 aa12.52□□□□□ -0.4
CASP3-201ENST00000308394 SRCAPQ6ZRS2 3230 aa12.52□□□□□ -0.4
CASP3-201ENST00000308394 GOLGA8BA8MQT2 603 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 WDHD1O75717 1129 aaPredicted RBP12.52□□□□□ -0.41
CASP3-201ENST00000308394 FGRP09769 529 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 CACNB3P54284 484 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 FAM47AQ5JRC9 791 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.41
CASP3-201ENST00000308394 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
CASP3-201ENST00000308394 HDAC9Q9UKV0 1011 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 TSPY2A6NKD2 308 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 WTAPQ15007 396 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
CASP3-201ENST00000308394 DDX4Q9NQI0 724 aaKnown RBP12.52□□□□□ -0.41
CASP3-201ENST00000308394 EVCP57679 992 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 NME8Q8N427 588 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.51□□□□□ -0.41
CASP3-201ENST00000308394 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 ORC4O43929 436 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 LIFRP42702 1097 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 TCP10Q12799 353 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 NFIAQ12857 509 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 SLC44A5Q8NCS7 719 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 TNPO1Q92973 898 aaKnown RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 PRMT6Q96LA8 375 aaPredicted RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 TDRD3Q9H7E2 651 aaKnown RBP12.51□□□□□ -0.41
CASP3-201ENST00000308394 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
CASP3-201ENST00000308394 ADAMTSL1Q8N6G6 1762 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 TNKSO95271 1327 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 RXRAP19793 462 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 TNIP1Q15025 636 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 NFKBIBQ15653 356 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 TTC6Q86TZ1 520 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 MICU3Q86XE3 530 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 PPFIA3O75145 1194 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 TFAP4Q01664 338 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 DNTTIP2Q5QJE6 756 aaKnown RBP12.5□□□□□ -0.41
CASP3-201ENST00000308394 SGMS1Q86VZ5 419 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 AGBL3Q8NEM8 1001 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 DDX11Q96FC9 970 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 GMLQ99445 158 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 MYL10Q9BUA6 226 aa12.5□□□□□ -0.41
CASP3-201ENST00000308394 OSBPL5Q9H0X9 879 aaPredicted RBP12.5□□□□□ -0.41
CASP3-201ENST00000308394 NAV1Q8NEY1 1877 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 ZBTB43O43298 467 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 JAK2O60674 1132 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 METAP2P50579 478 aaKnown RBP eCLIP12.49□□□□□ -0.41
CASP3-201ENST00000308394 EIF6P56537 245 aaKnown RBP12.49□□□□□ -0.41
CASP3-201ENST00000308394 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 ZSCAN29Q8IWY8 852 aaPredicted RBP12.49□□□□□ -0.41
CASP3-201ENST00000308394 CHMP4CQ96CF2 233 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 CPLX1O14810 134 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
CASP3-201ENST00000308394 NMT2O60551 498 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 TSPY3P0CV98 308 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 TSPY8P0CW00 308 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 SYT1P21579 422 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 CDK8P49336 464 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 PRELPP51888 382 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 IFIT1BQ5T764 474 aaKnown RBP12.49□□□□□ -0.41
CASP3-201ENST00000308394 ENAHQ8N8S7 591 aaPredicted RBP12.49□□□□□ -0.41
CASP3-201ENST00000308394 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 ROBO3Q96MS0 1386 aa12.49□□□□□ -0.41
CASP3-201ENST00000308394 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 LARP1BQ659C4 914 aaKnown RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 DNAJC14Q6Y2X3 702 aaPredicted RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 C16orf86Q6ZW13 317 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 ZFPM1Q8IX07 1006 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 SMAP1Q8IYB5 467 aaPredicted RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 FAM184AQ8NB25 1140 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 LLPHQ9BRT6 129 aaKnown RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 LAMB1P07942 1786 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 STX6O43752 255 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 MYBPC2Q14324 1141 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
CASP3-201ENST00000308394 NUP133Q8WUM0 1156 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
CASP3-201ENST00000308394 ZDHHC9Q9Y397 364 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms