RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ANKRD23Q86SG2 305 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 ZFYVE28Q9HCC9 887 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 CABP5Q9NP86 173 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 ZBTB21Q9ULJ3 1066 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
NDUFA3-201ENST00000303553 TRIM75PA6NK02 468 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 BTBD19C9JJ37 291 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 USP17L21D6R901 530 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 GDF11O95390 407 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 APPP05067 770 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 GABPAQ06546 454 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 C12orf60Q5U649 245 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 HELLSQ9NRZ9 838 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 LOC285556D6RIA3 1793 aa20.25■□□□□ 0.83
NDUFA3-201ENST00000303553 GSG1L2A8MUP6 293 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 GPR25O00155 361 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 HIP1O00291 1037 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 TDO2P48775 406 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 CRHR2Q13324 411 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 RRP1BQ14684 758 aaKnown RBP20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 ABCB5Q2M3G0 1257 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 SBK1Q52WX2 424 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 CENPQQ7L2Z9 268 aaPredicted RBP20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
NDUFA3-201ENST00000303553 PATL2C9JE40 543 aaKnown RBP20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 SHMT1P34896 483 aa20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 SPP2Q13103 211 aa20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 CTR9Q6PD62 1173 aa20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 TNS4Q8IZW8 715 aa20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 PROCA1Q8NCQ7 364 aaPredicted RBP20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 SLC45A1Q9Y2W3 748 aa20.23■□□□□ 0.83
NDUFA3-201ENST00000303553 PDHXO00330 501 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 FKTNO75072 461 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 GH2P01242 217 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 CYP2D6P10635 497 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 MFAP1P55081 439 aaKnown RBP20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 MCMDC2Q4G0Z9 681 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 GADL1Q6ZQY3 521 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 SEC62Q99442 399 aaKnown RBP20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 PARK7Q99497 189 aaKnown RBP20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 ZNF287Q9HBT7 754 aa20.22■□□□□ 0.83
NDUFA3-201ENST00000303553 ROBO3Q96MS0 1386 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 C19orf81C9J6K1 198 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 USP17L10C9JJH3 530 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 PDE4AP27815 886 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 PABPC4Q13310 644 aaKnown RBP eCLIP20.21■□□□□ 0.838e-13■■■■■ 37
NDUFA3-201ENST00000303553 C16orf86Q6ZW13 317 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 CCDC84Q86UT8 332 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 CCDC17Q96LX7 622 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 NAPBQ9H115 298 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 DIAPH3Q9NSV4 1193 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 PNMA3Q9UL41 463 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 AGTPBP1Q9UPW5 1226 aa20.21■□□□□ 0.83
NDUFA3-201ENST00000303553 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 BACE1P56817 501 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 MOGSQ13724 837 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 SH3D19Q5HYK7 790 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 IFNL3Q8IZI9 196 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 TMOD4Q9NZQ9 345 aa20.2■□□□□ 0.82
NDUFA3-201ENST00000303553 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 TLR2O60603 784 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 SDSP20132 328 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 CDK8P49336 464 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 HMGCS2P54868 508 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 MTMR2Q13614 643 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 DYNLL2Q96FJ2 89 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 ERO1AQ96HE7 468 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 FEZ1Q99689 392 aa20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
NDUFA3-201ENST00000303553 CYP2D7A0A087X1C5 515 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 A0A0D9SFI3 127 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 USP14P54578 494 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 JAG1P78504 1218 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 SP3Q02447 781 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 ARHGEF6Q15052 776 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 GPAT2Q6NUI2 795 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 CTU1Q7Z7A3 348 aaKnown RBP20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 CCDC136Q96JN2 1154 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 FAM227BQ96M60 508 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 R3HDMLQ9H3Y0 253 aa20.18■□□□□ 0.82
NDUFA3-201ENST00000303553 EVX2Q03828 476 aa20.17■□□□□ 0.82
NDUFA3-201ENST00000303553 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
NDUFA3-201ENST00000303553 MKNK2Q9HBH9 465 aa20.17■□□□□ 0.82
NDUFA3-201ENST00000303553 CCDC171Q6TFL3 1326 aa20.17■□□□□ 0.82
NDUFA3-201ENST00000303553 OSBPP22059 807 aa20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 PDE4BQ07343 736 aa20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 PKN2Q16513 984 aaKnown RBP20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 SHROOM1Q2M3G4 852 aaPredicted RBP20.16■□□□□ 0.82
NDUFA3-201ENST00000303553 USP17L2Q6R6M4 530 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms