RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PLCD1P51178 756 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 MYO6Q9UM54 1294 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 ABCC6O95255 1503 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 MFAP3LO75121 409 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
COL6A2-201ENST00000300527 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL6A2-201ENST00000300527 CABP4P57796 275 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 RFX7Q2KHR2 1363 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 CCT5P48643 541 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 PLEKHG2Q9H7P9 1386 aa16.62■□□□□ 0.25
COL6A2-201ENST00000300527 KRT9P35527 623 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 SH2B2O14492 632 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-201ENST00000300527 TATP17735 454 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-201ENST00000300527 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 MORC3Q14149 939 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 PANX2Q96RD6 677 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 EHD4Q9H223 541 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-201ENST00000300527 TOB1P50616 345 aaPredicted RBP16.61■□□□□ 0.25
COL6A2-201ENST00000300527 METTL24Q5JXM2 366 aa16.61■□□□□ 0.25
COL6A2-201ENST00000300527 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 PLBD2Q8NHP8 589 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 CHP1Q99653 195 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 GYPCP04921 128 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 MDM2Q00987 491 aaPredicted RBP16.6■□□□□ 0.25
COL6A2-201ENST00000300527 FAM89AQ96GI7 184 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
COL6A2-201ENST00000300527 ERVK-24P63145 666 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 MSANTD4Q8NCY6 345 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 AIDAQ96BJ3 306 aa16.6■□□□□ 0.25
COL6A2-201ENST00000300527 FBXO2Q9UK22 296 aaPredicted RBP16.6■□□□□ 0.25
COL6A2-201ENST00000300527 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 CNGA4Q8IV77 575 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 PSMB7Q99436 277 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 RAB21Q9UL25 225 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 STIM1Q13586 685 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 SPATA1Q5VX52 437 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 KIAA1328Q86T90 577 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 PCMTD1Q96MG8 357 aaPredicted RBP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
COL6A2-201ENST00000300527 MKRN1Q9UHC7 482 aaKnown RBP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
COL6A2-201ENST00000300527 PRDM1O75626 825 aa16.58■□□□□ 0.25
COL6A2-201ENST00000300527 ZFYP08048 801 aaPredicted RBP16.58■□□□□ 0.25
COL6A2-201ENST00000300527 SAMM50Q9Y512 469 aa16.58■□□□□ 0.25
COL6A2-201ENST00000300527 MYO1BO43795 1136 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 GGCXP38435 758 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 MNAT1P51948 309 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 ZNF174Q15697 407 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 CHRNA2Q15822 529 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 HELBQ8NG08 1087 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-201ENST00000300527 MMS19Q96T76 1030 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 NAPBQ9H115 298 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 PTPREP23469 700 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 WHAMMP3Q1A5X7 153 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
COL6A2-201ENST00000300527 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
COL6A2-201ENST00000300527 CASP7P55210 303 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 UBXN1Q04323 297 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 RTN1Q16799 776 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 VPS54Q9P1Q0 977 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
COL6A2-201ENST00000300527 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 TSR1Q2NL82 804 aaKnown RBP16.57■□□□□ 0.24
COL6A2-201ENST00000300527 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
COL6A2-201ENST00000300527 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 A0A087X0B3 334 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 ZNF185O15231 689 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 USP5P45974 858 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 CORO7P57737 925 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
COL6A2-201ENST00000300527 H7C1W4 665 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
COL6A2-201ENST00000300527 PPFIA4O75335 1185 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 ATP1A1P05023 1023 aaKnown RBP16.56■□□□□ 0.24
COL6A2-201ENST00000300527 PHKG2P15735 406 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 GPTP24298 496 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 DNA2P51530 1060 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 KRT31Q15323 416 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 SYMPKQ92797 1274 aaKnown RBP16.56■□□□□ 0.24
COL6A2-201ENST00000300527 SLIT1O75093 1534 aa16.56■□□□□ 0.24
COL6A2-201ENST00000300527 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms