RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ANTXR2P58335 489 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 GJB4Q9NTQ9 266 aa18.27■□□□□ 0.52
MAP1LC3B-201ENST00000268607 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.51
MAP1LC3B-201ENST00000268607 KLF18A0A0U1RQI7 1052 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TUBB4AP04350 444 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 LMAN1P49257 510 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ZNF396Q96N95 335 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 BSDC1Q9NW68 430 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 EFCAB8A8MWE9 144 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 RXRAP19793 462 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MMP14P50281 582 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NDUFA8P51970 172 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 KIAA1468Q9P260 1216 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SLC5A1P13866 664 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PSEN1P49768 467 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CC2D1AQ6P1N0 951 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ILDR1Q86SU0 546 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MB21D2Q8IYB1 491 aaPredicted RBP18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MAGEB6Q8N7X4 407 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SPATA5Q8NB90 893 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PARP3Q9Y6F1 533 aa18.26■□□□□ 0.51
MAP1LC3B-201ENST00000268607 FDPSP14324 419 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GOLGA8FQ08AF8 430 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GOLGA8DPQ0D2H9 430 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NCOA7Q8NI08 942 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ABCF2Q9UG63 623 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GOLGA8BA8MQT2 603 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TICAM2Q86XR7 235 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ADAM21Q9UKJ8 722 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 JRKLQ9Y4A0 524 aa18.25■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GNL2Q13823 731 aaKnown RBP18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PTPN21Q16825 1174 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SRRTQ9BXP5 876 aaKnown RBP18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ATP1A3P13637 1013 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GUCY2CP25092 1073 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SENP2Q9HC62 589 aa18.24■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ATP8B1O43520 1251 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 FANCCQ00597 558 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NCAPHQ15003 741 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SLC15A2Q16348 729 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PACS2Q86VP3 889 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ARMT1Q9H993 441 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 B4E1Z4 1266 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CCP110O43303 1012 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CYB5R4Q7L1T6 521 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GOLGA6L1Q8N7Z2 621 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NCAPGQ9BPX3 1015 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 BPIFA3Q9BQP9 254 aa18.23■□□□□ 0.51
MAP1LC3B-201ENST00000268607 LAMB2P55268 1798 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TCRBV5S4A2TA0A5A2 114 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PRKAB2O43741 272 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TPM1P09493 284 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 PRR29P0C7W0 189 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SF3B2Q13435 895 aaKnown RBP18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ADALQ6DHV7 355 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MYCBPQ99417 103 aaPredicted RBP18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 HPS5Q9UPZ3 1129 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MBD4O95243 580 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 TRDNQ13061 729 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 GPATCH11Q8N954 259 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MIGA1Q8NAN2 632 aa18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 FAM84BQ96KN1 310 aaPredicted RBP18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 STRBPQ96SI9 672 aaKnown RBP18.22■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 DPF2Q92785 391 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 NEDD4P46934 1319 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 SALL1Q9NSC2 1324 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 CPLX1O14810 134 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 POLR3DP05423 398 aaPredicted RBP18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 ATL3Q6DD88 541 aa18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
MAP1LC3B-201ENST00000268607 MYH15Q9Y2K3 1946 aa18.2■□□□□ 0.5
MAP1LC3B-201ENST00000268607 SLC3A2P08195 630 aaKnown RBP18.2■□□□□ 0.5
MAP1LC3B-201ENST00000268607 ACTN2P35609 894 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms