RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ADAMTS3O15072 1205 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 ZNF174Q15697 407 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 FBXO38Q6PIJ6 1188 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 STAG1Q8WVM7 1258 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 NTSR2O95665 410 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
SSPN-201ENST00000242729 ENAHQ8N8S7 591 aaPredicted RBP19.31■□□□□ 0.68
SSPN-201ENST00000242729 MARCH10Q8NA82 808 aaPredicted RBP19.31■□□□□ 0.68
SSPN-201ENST00000242729 DESI2Q9BSY9 194 aa19.31■□□□□ 0.68
SSPN-201ENST00000242729 FANCGO15287 622 aa19.3■□□□□ 0.68
SSPN-201ENST00000242729 LRP6O75581 1613 aa19.3■□□□□ 0.68
SSPN-201ENST00000242729 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
SSPN-201ENST00000242729 CELF1Q92879 486 aaKnown RBP19.3■□□□□ 0.68
SSPN-201ENST00000242729 TIGD1Q96MW7 591 aa19.3■□□□□ 0.68
SSPN-201ENST00000242729 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.3■□□□□ 0.68
SSPN-201ENST00000242729 ST7Q9NRC1 585 aa19.3■□□□□ 0.68
SSPN-201ENST00000242729 IKBKBO14920 756 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 CYP2D6P10635 497 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 TAF1P21675 1872 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
SSPN-201ENST00000242729 MED15Q96RN5 788 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 AATFQ9NY61 560 aaKnown RBP eCLIP19.29■□□□□ 0.68
SSPN-201ENST00000242729 DEXIO95424 95 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 CDC25AP30304 524 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 ZNF384Q8TF68 577 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
SSPN-201ENST00000242729 MYH3P11055 1940 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 USP17L12C9JPN9 530 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 USP17L21D6R901 530 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 SLU7O95391 586 aaKnown RBP19.28■□□□□ 0.68
SSPN-201ENST00000242729 SMAP1Q8IYB5 467 aaPredicted RBP19.28■□□□□ 0.68
SSPN-201ENST00000242729 URI1O94763 535 aaPredicted RBP19.28■□□□□ 0.68
SSPN-201ENST00000242729 PTPREP23469 700 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 IFIT1BQ5T764 474 aaKnown RBP19.28■□□□□ 0.68
SSPN-201ENST00000242729 WASF1Q92558 559 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 PRDM4Q9UKN5 801 aa19.28■□□□□ 0.68
SSPN-201ENST00000242729 MTF1Q14872 753 aa19.27■□□□□ 0.68
SSPN-201ENST00000242729 VSTM4Q8IW00 320 aa19.27■□□□□ 0.68
SSPN-201ENST00000242729 BLZF1Q9H2G9 400 aa19.27■□□□□ 0.68
SSPN-201ENST00000242729 EP400Q96L91 3159 aa19.27■□□□□ 0.68
SSPN-201ENST00000242729 ESR2Q92731 530 aa19.27■□□□□ 0.68
SSPN-201ENST00000242729 VWA3AA6NCI4 1184 aa19.27■□□□□ 0.67
SSPN-201ENST00000242729 KARSQ15046 597 aaKnown RBP19.27■□□□□ 0.67
SSPN-201ENST00000242729 RILPL1Q5EBL4 403 aa19.27■□□□□ 0.67
SSPN-201ENST00000242729 TOGARAM2Q6ZUX3 1019 aa19.27■□□□□ 0.67
SSPN-201ENST00000242729 ANKRD18AQ8IVF6 992 aa19.27■□□□□ 0.67
SSPN-201ENST00000242729 ABCA3Q99758 1704 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 A0A0U1RQJ8 604 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 NRDCO43847 1150 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 PKN1Q16512 942 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 ATRIPQ8WXE1 791 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 ZSCAN10Q96SZ4 725 aaPredicted RBP19.26■□□□□ 0.67
SSPN-201ENST00000242729 IRX2Q9BZI1 471 aaPredicted RBP19.26■□□□□ 0.67
SSPN-201ENST00000242729 MAPK8IP1Q9UQF2 711 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 TEX33O43247 280 aa19.26■□□□□ 0.67
SSPN-201ENST00000242729 CGNQ9P2M7 1197 aaKnown RBP19.26■□□□□ 0.67
SSPN-201ENST00000242729 GNAT2P19087 354 aa19.25■□□□□ 0.67
SSPN-201ENST00000242729 SEC23AQ15436 765 aa19.25■□□□□ 0.67
SSPN-201ENST00000242729 SYMPKQ92797 1274 aaKnown RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 CD44P16070 742 aaKnown RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 PRDX5P30044 214 aa19.25■□□□□ 0.67
SSPN-201ENST00000242729 RIOK1Q9BRS2 568 aaKnown RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 COL1A1P02452 1464 aaPredicted RBP19.25■□□□□ 0.67
SSPN-201ENST00000242729 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
SSPN-201ENST00000242729 ECM29Q5VYK3 1845 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 ACTN4O43707 911 aaKnown RBP19.24■□□□□ 0.67
SSPN-201ENST00000242729 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
SSPN-201ENST00000242729 PNPLA7Q6ZV29 1317 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 CCDC196A0A1B0GTZ2 297 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 TRIM75PA6NK02 468 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 CBFA2T2O43439 604 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 ERO1AQ96HE7 468 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 FAM84BQ96KN1 310 aaPredicted RBP19.24■□□□□ 0.67
SSPN-201ENST00000242729 ZSWIM4Q9H7M6 989 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 MINPP1Q9UNW1 487 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 DISP2A7MBM2 1401 aa19.24■□□□□ 0.67
SSPN-201ENST00000242729 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 CATIPQ7Z7H3 387 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 RASGRP4Q8TDF6 673 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 MCM7P33993 719 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 ARHGAP29Q52LW3 1261 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 CAVIN4Q5BKX8 364 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 PIK3AP1Q6ZUJ8 805 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 TXNRD3Q86VQ6 643 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 WDR24Q96S15 920 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 CDC5LQ99459 802 aaKnown RBP19.23■□□□□ 0.67
SSPN-201ENST00000242729 PLIN2Q99541 437 aa19.23■□□□□ 0.67
SSPN-201ENST00000242729 SRPRBQ9Y5M8 271 aaKnown RBP19.23■□□□□ 0.67
SSPN-201ENST00000242729 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
SSPN-201ENST00000242729 ETF1P62495 437 aaKnown RBP19.22■□□□□ 0.67
SSPN-201ENST00000242729 REXO1L1PQ8IX06 675 aa19.22■□□□□ 0.67
SSPN-201ENST00000242729 GPR101Q96P66 508 aaPredicted RBP19.22■□□□□ 0.67
SSPN-201ENST00000242729 BAG1Q99933 345 aaPredicted RBP19.22■□□□□ 0.67
SSPN-201ENST00000242729 CARD6Q9BX69 1037 aa19.22■□□□□ 0.67
SSPN-201ENST00000242729 ZNF446Q9NWS9 450 aa19.22■□□□□ 0.67
SSPN-201ENST00000242729 BAZ2AQ9UIF9 1905 aaKnown RBP19.22■□□□□ 0.67
SSPN-201ENST00000242729 MYH2Q9UKX2 1941 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms