RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Gbp10Q000W5 611 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Nlrp9bQ66X22 1003 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Rexo4Q6PAQ4 432 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Ferd3lQ923Z4 168 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 MmadhcQ99LS1 296 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Ndc80Q9D0F1 642 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Mrps9Q9D7N3 390 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Tmco5aQ9D9D5 303 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Dmrtc1Q9D9R7 182 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Rabgef1Q9JM13 491 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Uts2Q9QZQ3 123 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Igsf1Q7TQA1 1317 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Sh2d4bA6X942 431 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 VimP20152 466 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Eif4a1P60843 406 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Usp6nlQ80XC3 819 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Maip1Q8BHE8 291 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Mta1Q8K4B0 715 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Lztfl1Q9JHQ5 299 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Speer3W4VSP1 261 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Rnaseh1O70338 285 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 IkbkgO88522 412 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 RargP18911 458 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Bach1P97302 739 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Atp2a3Q64518 1038 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Nlrp4aQ8BU40 982 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Washc5Q8C2E7 1159 aaKnown RBP8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Ccdc60Q8C4J0 545 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Lrrc45Q8CIM1 670 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Q9D1Z2 194 aa8.04□□□□□ -1.12
Chm-202ENSMUST00000113388 Sos2Q02384 1333 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Ap1g2O88512 791 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Stim1P70302 685 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Klra3Q64329 266 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Ints3Q7TPD0 1041 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 R3hdm2Q80TM6 1044 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Rimbp2Q80U40 1072 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Fam53cQ8BXQ8 393 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Fsd2Q8BZ52 692 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Krt222Q8CCX5 294 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Ccdc150Q8CDI7 1110 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Tut1Q8R3F9 869 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Nrbp1Q99J45 535 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Zfyve19Q9DAZ9 389 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Rapgef4Q9EQZ6 1011 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Capn12Q9ER56 720 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Gdpd2Q9ESM6 539 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Stat2Q9WVL2 923 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Zc3h4Q6ZPZ3 1304 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Klhl41A2AUC9 606 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 LdhaP06151 332 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Ppfia3P60469 1194 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Ubxn2bQ0KL01 331 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Pla2g4eQ50L42 875 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Klra4Q60651 263 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Zc3h6Q8BYK8 1177 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Tdrd7Q8K1H1 1086 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Hcls1P49710 486 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Cct8l1Q80YT3 562 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 CpzQ8R4V4 654 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 PapolbQ9WVP6 641 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Pde4dQ01063 747 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Olfm4Q3UZZ4 505 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Retreg2Q6NS82 541 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Sgsm3Q8VCZ6 750 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Sh2b1Q91ZM2 756 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Luc7lQ9CYI4 371 aaKnown RBP8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Trip6Q9Z1Y4 480 aa8.03□□□□□ -1.12
Chm-202ENSMUST00000113388 Atp1b3P97370 278 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Daam2Q80U19 1115 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Utp6Q8VCY6 597 aaKnown RBP8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Emilin1Q99K41 1017 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 4930449I24RikQ9D5E3 319 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Spef2Q8C9J3 1734 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Uhrf1bp1B2KF50 1429 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Abl2Q4JIM5 1182 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Gm12185Q5NCB2 835 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Cdc37Q61081 379 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Wdr44Q6NVE8 915 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 TxlnaQ6PAM1 554 aaKnown RBP8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Lrrc8aQ80WG5 810 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Wdr35Q8BND3 1181 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Slc24a3Q99PD7 645 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Spata1Q9D5R4 444 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Sel1lQ9Z2G6 790 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Krt85Q9Z2T6 507 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Ttc13A0A1L1SSC7 844 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Ttll7A4Q9F0 912 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 C2cd2E9Q3C1 696 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Rint1Q8BZ36 792 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Arfgef2A2A5R2 1792 aa8.02□□□□□ -1.13
Chm-202ENSMUST00000113388 Gm4985A2ALC6 410 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Alox15P39654 663 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Rhbdl3P58873 404 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Slf2Q6P9P0 1278 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Usp8Q80U87 1080 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Znf428Q8C1M2 176 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Gbp7Q91Z40 638 aa8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Serbp1Q9CY58 407 aaKnown RBP8.01□□□□□ -1.13
Chm-202ENSMUST00000113388 Golgb1E9PVZ8 3238 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms