RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Ier5O89113 308 aa9.02□□□□□ -0.97
Spen-201ENSMUST00000078886 Pde5aQ8CG03 865 aa9.02□□□□□ -0.97
Spen-201ENSMUST00000078886 Xbp1O35426 267 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Clec4gQ8BNX1 294 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Gstt4Q9D4P7 240 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Palm3A2TJV2 734 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 LgsnQ8CIX8 563 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Fam135bQ9DAI6 1403 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Abcc5Q9R1X5 1436 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Nfkbil1O88995 381 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 DroshaQ5HZJ0 1373 aaKnown RBP9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Pnma5Q5DTT8 618 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Ppme1Q8BVQ5 386 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Stac3Q8BZ71 360 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Sar1bQ9CQC9 198 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Kdm2bQ6P1G2 1309 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Rps6ka1P18653 724 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Stx3Q64704 289 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 A2mQ6GQT1 1474 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Hoxb7P09024 217 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Ulk3Q3U3Q1 472 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Bmp2kQ91Z96 1138 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Serpinb6Q60854 378 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Sh2b1Q91ZM2 756 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Hs6st3Q9QYK4 470 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Lonrf2B2RT44 518 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 CalcaP70160 136 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Krt75Q8BGZ7 551 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Gdap1l1Q8VE33 370 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Atg3Q9CPX6 314 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Myl3P09542 204 aa9.01□□□□□ -0.97
Spen-201ENSMUST00000078886 Zscan25B2RX31 543 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Vamp4O70480 141 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Slc30a9Q5IRJ6 567 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Krt14Q61781 484 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Stkld1Q80YS9 662 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Sept10Q8C650 452 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 NexmifQ5DTT1 1515 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Rprd2Q6NXI6 1469 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Cep85lA0A1W2P884 806 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Klhl20Q8VCK5 604 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Slc13a1Q9JHI4 594 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Erich3F6QRE9 1637 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 CadpsQ80TJ1 1355 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Pa2g4P50580 394 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Nsun2Q1HFZ0 757 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Pfdn1Q9CWM4 122 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Pcf11G3X9Z4 1553 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Lrrc74aA0A1Y7VMD6 494 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Catsper1Q91ZR5 686 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 SdsQ8VBT2 327 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Nrbf2Q8VCQ3 287 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Calml3Q9D6P8 149 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 AU022751B1B0V2 589 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Stk10O55098 966 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 FibpQ9JI19 357 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Sh3gl2Q62420 352 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Tbc1d4Q8BYJ6 1307 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Psmc1P62192 440 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Ppil4Q9CXG3 492 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Zcchc8Q9CYA6 709 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Cd274Q9EP73 290 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Cylc2B1AWN8 422 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Pak1O88643 545 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Nucks1Q80XU3 234 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Dnajc25A2ALW5 357 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Pde6bP23440 856 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 WaplQ65Z40 1200 aaKnown RBP9□□□□□ -0.97
Spen-201ENSMUST00000078886 Abtb2Q7TQI7 1024 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 GckrQ91X44 587 aa9□□□□□ -0.97
Spen-201ENSMUST00000078886 Urb2E9Q7L1 1524 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Gm10110D3Z5M2 615 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Cabcoco1Q8CDT7 208 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Drc3Q9D5E4 523 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Rnf14Q9JI90 485 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Atp2a3Q64518 1038 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Vat1lQ80TB8 417 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Amotl2Q8K371 772 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Mlh1Q9JK91 760 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Lig1P37913 916 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 EprsQ8CGC7 1512 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Tsr1Q5SWD9 803 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Hmgb2P30681 210 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Myo1gQ5SUA5 1024 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Rab34Q64008 259 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Tekt3Q6X6Z7 490 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Ccdc50Q810U5 305 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Nde1Q9CZA6 344 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Map2k2Q63932 401 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Ncaph2Q8BSP2 607 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Krt5Q922U2 580 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Utp11Q9CZJ1 253 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Snx1Q9WV80 522 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Aox1O54754 1333 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Rtl9Q32KG4 1339 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Sstr3P30935 428 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Hgh1Q8C3I8 393 aa8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Ndc80Q9D0F1 642 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 AatfQ9JKX4 526 aaKnown RBP8.99□□□□□ -0.97
Spen-201ENSMUST00000078886 Pik3c2gO70167 1506 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms