RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Gm2244L7N2A3 218 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Gm3278L7N2D2 218 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Gm8271L7N2E2 218 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Uba1yP31254 1058 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Atp2b3Q0VF55 1220 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Nlrp1aQ2LKU9 1182 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Dpf2Q61103 391 aaKnown RBP9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Glis3Q6XP49 780 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Sept9Q80UG5 583 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Mxd3Q80US8 206 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Usp20Q8C6M1 916 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Mxra7Q9CZH7 178 aa9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Sart3Q9JLI8 962 aaKnown RBP9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Mbd3Q9Z2D8 285 aaKnown RBP9.47□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Scn9aQ62205 1984 aa9.46□□□□□ -0.89
Ssbp1-201ENSMUST00000031971 Ankrd63A2ARS0 390 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Zfp362B1ASA5 418 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Gm4340L7N2C4 268 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Defa-rs1P17533 116 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Sept1P42209 366 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Neurod6P48986 337 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Gnb5P62881 395 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fam83bQ0VBM2 1012 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Calr4Q3TQS0 420 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fam228bQ497Q6 232 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Nxpe4Q52KP5 543 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 NfkbibQ60778 359 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Vil1Q62468 827 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ufl1Q8CCJ3 793 aaKnown RBP9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Pcdhgc3Q91XX1 934 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Chmp4bQ9D8B3 224 aaKnown RBP9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Flt1P35969 1333 aa9.46□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Tpx2A2APB8 745 aaKnown RBP9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ccdc34Q3UI66 367 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Rbm27Q5SFM8 1060 aaKnown RBP9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ppp4r3aQ6P2K6 820 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fchsd1Q6PFY1 688 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Phf20l1Q8CCJ9 1013 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Wipf1Q8K1I7 493 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ttc5Q99LG4 440 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 CarsQ9ER72 831 aaKnown RBP9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Pde3aQ9Z0X4 1141 aa9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Rbbp6P97868 1790 aaKnown RBP9.45□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Csrnp1P59054 583 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 CalcaP70160 136 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Rnf180Q3U827 592 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Zcwpw1Q6IR42 630 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Asap2Q7SIG6 958 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 ParvgQ9ERD8 331 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Col24a1Q30D77 1733 aa9.44□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 NynrinQ5DTZ0 1840 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Peak1Q69Z38 1735 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Carmil3Q3UFQ8 1375 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Sec1P97353 368 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 NogP97466 232 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Vps54Q5SPW0 977 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ift57Q8BXG3 429 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Slc26a8Q8R0C3 999 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 SnrkQ8VDU5 748 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 HnrnpuQ8VEK3 800 aaKnown RBP9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fbxo3Q9DC63 480 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Bcar3Q9QZK2 820 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Irs4Q9Z0Y7 1216 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Mtmr2Q9Z2D1 643 aa9.43□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Eddm13E9Q7F5 164 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Usp17lbE9Q9U0 468 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Dcdc2bF7BCK0 340 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Speer4dL7N216 212 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 NeflP08551 543 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Adrb2P18762 418 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Guca2aP33680 116 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 LifrP42703 1092 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 CbarpQ66L44 698 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Pram1Q6BCL1 675 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ube2oQ6ZPJ3 1288 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ptrh1Q8BW00 204 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fbxo45Q8K3B1 286 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Sept12Q9D451 317 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Upk3bl1Q9D701 249 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Jag1Q9QXX0 1218 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Myh4Q5SX39 1939 aa9.42□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Myh15E9Q264 1925 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Arfgef1G3X9K3 1846 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Gm12355A2A4X6 163 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Brd1E9PZ26 1189 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Ccdc146E9Q9F7 977 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 AampJ3QN89 436 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Psmd14O35593 310 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Mapkapk5O54992 473 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Fhl2O70433 279 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 EspnlQ3UYR4 1005 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Gm5592Q3V0A6 857 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Rbm15bQ6PHZ5 887 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Smc5Q8CG46 1101 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Shtn1Q8K2Q9 631 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Sf3a1Q8K4Z5 791 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Glis2Q8VDL9 521 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Eif2s2Q99L45 331 aaKnown RBP9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Tmem79Q9D709 391 aa9.41□□□□□ -0.9
Ssbp1-201ENSMUST00000031971 Bag3Q9JLV1 577 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms