RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 NefhP19246 1090 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Mybl2P48972 704 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Slc45a1Q8BIV7 751 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Znf638Q61464 1960 aaKnown RBP18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 SynrgQ5SV85 1306 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Ppfia1B2RXQ2 1266 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Ndufv1Q91YT0 464 aa18.9■□□□□ 0.62
Ubb-201ENSMUST00000019649 Abl1P00520 1123 aa18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Lamp1P11438 406 aaKnown RBP18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Sept2P42208 361 aaKnown RBP18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Zfp341Q6PGC9 846 aa18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ttc12Q8BW49 704 aa18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Cog6Q8R3I3 657 aa18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Lama2Q60675 3118 aaKnown RBP18.89■□□□□ 0.61
Ubb-201ENSMUST00000019649 Zc3h4Q6ZPZ3 1304 aaKnown RBP18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 B020004C17RikJ3QP07 232 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Slc16a10Q3U9N9 512 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Q3UK37 420 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Prr7Q3V0I2 269 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ipo8Q7TMY7 1010 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Dpp8Q80YA7 892 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Tmc1Q8R4P5 757 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Itm2cQ91VK4 269 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Znf287Q9EQB9 759 aa18.88■□□□□ 0.61
Ubb-201ENSMUST00000019649 Gm36210A0A1B0GS00 229 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ythdc1E9Q5K9 736 aaKnown RBP18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 MecomP14404 1042 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Irf5P56477 497 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Fam83hQ148V8 1209 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Podnl1Q6P3Y9 559 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ift74Q8BKE9 600 aa18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 StrbpQ91WM1 672 aaKnown RBP18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 SmapQ9R0P4 181 aaKnown RBP18.87■□□□□ 0.61
Ubb-201ENSMUST00000019649 Eps15P42567 897 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Eya3P97480 510 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Eaf2Q91ZD6 262 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Mov10l1Q99MV5 1187 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Fsip1Q9D3V5 435 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ngly1Q9JI78 651 aa18.86■□□□□ 0.61
Ubb-201ENSMUST00000019649 Tbc1d8bA3KGB4 1114 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Rexo5D3YW29 759 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Sema3fO88632 785 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Pde11aP0C1Q2 933 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Fgfr2P21803 821 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Olfm4Q3UZZ4 505 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Acap3Q6NXL5 833 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Syt5Q9R0N5 386 aa18.85■□□□□ 0.61
Ubb-201ENSMUST00000019649 Zgrf1Q0VGT4 1863 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Cyp2b10P12791 500 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Q3TYL0 343 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 H2-Q4Q8HWB2 354 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Tdrd1Q99MV1 1172 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Efcc1Q9JJF6 558 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Usp14Q9JMA1 493 aaKnown RBP18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Rc3h1Q4VGL6 1130 aaKnown RBP18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Cep131Q62036 1060 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Htatsf1Q8BGC0 757 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Bri3bpQ8BXV2 253 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Traf7Q922B6 594 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Tomm22Q9CPQ3 142 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Vta1Q9CR26 309 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Ralgps2Q9ERD6 590 aa18.84■□□□□ 0.61
Ubb-201ENSMUST00000019649 Dock2Q8C3J5 1828 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 TicrrQ8BQ33 1889 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 Slc1a4O35874 532 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 Nkx1-2P42580 305 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 SelpQ01102 768 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 Otop3Q80UF9 577 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 Lrrfip2Q91WK0 415 aa18.83■□□□□ 0.6
Ubb-201ENSMUST00000019649 Atp8b3Q6UQ17 1335 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 Cd3dP04235 173 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 Kank4Q6P9J5 1016 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 Rassf10Q8BL43 508 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 CenppQ9CZ92 286 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 Tcof1O08784 1320 aaKnown RBP18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 Rad50P70388 1312 aa18.82■□□□□ 0.6
Ubb-201ENSMUST00000019649 WaplQ65Z40 1200 aaKnown RBP18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Dync1li2Q6PDL0 492 aaKnown RBP18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Scfd1Q8BRF7 639 aaKnown RBP18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 OplahQ8K010 1288 aa18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Slc18a1Q8R090 521 aa18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Nup133Q8R0G9 1155 aa18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Akap8Q9DBR0 687 aaKnown RBP18.81■□□□□ 0.6
Ubb-201ENSMUST00000019649 Pdia3P27773 505 aaKnown RBP18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Shisa4Q8CA71 197 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Top1mtQ8R4U6 593 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Srgap1Q91Z69 1062 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Eid1Q9DCR4 169 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Prkab1Q9R078 270 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Nek4Q9Z1J2 792 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Zmym2Q9CU65 1376 aa18.8■□□□□ 0.6
Ubb-201ENSMUST00000019649 Ercc3P49135 783 aa18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 Ccdc84Q4VA36 332 aaKnown RBP18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 Specc1Q5SXY1 1067 aa18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 Hand2Q61039 217 aa18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 Rnf41Q8BH75 317 aa18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 C1qtnf12Q8R2Z0 308 aa18.79■□□□□ 0.6
Ubb-201ENSMUST00000019649 Zscan18E9PUD6 809 aa18.78■□□□□ 0.6
Ubb-201ENSMUST00000019649 DaxxO35613 739 aa18.78■□□□□ 0.6
Ubb-201ENSMUST00000019649 Glra4Q61603 456 aa18.78■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms