RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Krtap29-1A2A5X4 342 aa7.99□□□□□ -1.13
Ssh1-204ENSMUST00000159592 Gm884A2A9H6 3643 aa7.97□□□□□ -1.13
Ssh1-204ENSMUST00000159592 LrbaQ9ESE1 2856 aa7.97□□□□□ -1.13
Ssh1-204ENSMUST00000159592 FlncQ8VHX6 2726 aaKnown RBP7.97□□□□□ -1.13
Ssh1-204ENSMUST00000159592 Cmya5Q70KF4 3739 aa7.97□□□□□ -1.13
Ssh1-204ENSMUST00000159592 Nf1Q04690 2841 aa7.96□□□□□ -1.14
Ssh1-204ENSMUST00000159592 Hivep1Q03172 2688 aa7.95□□□□□ -1.14
Ssh1-204ENSMUST00000159592 Gm2310J3QNJ2 377 aa7.95□□□□□ -1.14
Ssh1-204ENSMUST00000159592 TgO08710 2766 aa7.95□□□□□ -1.14
Ssh1-204ENSMUST00000159592 Romo1P60603 79 aa7.94□□□□□ -1.14
Ssh1-204ENSMUST00000159592 Krtap13O88375 197 aa7.91□□□□□ -1.14
Ssh1-204ENSMUST00000159592 Rpl37Q9D823 97 aa7.9□□□□□ -1.14
Ssh1-204ENSMUST00000159592 2310050C09RikG5E8Z3 280 aa7.9□□□□□ -1.15
Ssh1-204ENSMUST00000159592 Lama5Q61001 3718 aa7.89□□□□□ -1.15
Ssh1-204ENSMUST00000159592 Gm10382Q3V0T5 144 aa7.86□□□□□ -1.15
Ssh1-204ENSMUST00000159592 Muc5acE9QAQ8 3455 aa7.84□□□□□ -1.15
Ssh1-204ENSMUST00000159592 Pdzd2E9Q1M1 2796 aa7.83□□□□□ -1.16
Ssh1-204ENSMUST00000159592 Gm9507D3Z5T3 223 aa7.8□□□□□ -1.16
Ssh1-204ENSMUST00000159592 Camk2n1Q6QWF9 78 aa7.79□□□□□ -1.16
Ssh1-204ENSMUST00000159592 Helz2E9QAM5 2947 aaKnown RBP7.76□□□□□ -1.17
Ssh1-204ENSMUST00000159592 Krtap14O08640 167 aa7.74□□□□□ -1.17
Ssh1-204ENSMUST00000159592 Gm5767A0A0J9YTU8 78 aa7.74□□□□□ -1.17
Ssh1-204ENSMUST00000159592 2310061N02RikQ9D6S9 174 aa7.72□□□□□ -1.17
Ssh1-204ENSMUST00000159592 Krtap10-4Q08EG8 221 aa7.7□□□□□ -1.18
Ssh1-204ENSMUST00000159592 Gm19426M0QWC7 77 aa7.68□□□□□ -1.18
Ssh1-204ENSMUST00000159592 BC029722A0A0N4SW31 51 aa7.65□□□□□ -1.19
Ssh1-204ENSMUST00000159592 Fam229aB2KGE5 128 aa7.65□□□□□ -1.19
Ssh1-204ENSMUST00000159592 OtogO55225 2910 aa7.62□□□□□ -1.19
Ssh1-204ENSMUST00000159592 Tenm3Q9WTS6 2715 aa7.62□□□□□ -1.19
Ssh1-204ENSMUST00000159592 FcgbpE9Q0B5 2583 aa7.61□□□□□ -1.19
Ssh1-204ENSMUST00000159592 Cox6b2Q80ZN9 88 aa7.6□□□□□ -1.19
Ssh1-204ENSMUST00000159592 Svep1A2AVA0 3567 aa7.6□□□□□ -1.19
Ssh1-204ENSMUST00000159592 Tnp2P11378 117 aa7.57□□□□□ -1.2
Ssh1-204ENSMUST00000159592 D6Ertd527eA0A0N4SWI3 464 aa7.57□□□□□ -1.2
Ssh1-204ENSMUST00000159592 Krtap10-10A0A1W2P7T6 217 aa7.56□□□□□ -1.2
Ssh1-204ENSMUST00000159592 Sec61bQ9CQS8 96 aaKnown RBP7.55□□□□□ -1.2
Ssh1-204ENSMUST00000159592 Csmd2V9GX34 3611 aa7.5□□□□□ -1.21
Ssh1-204ENSMUST00000159592 Ndufaf8A2AMZ4 74 aa7.5□□□□□ -1.21
Ssh1-204ENSMUST00000159592 Rps29P62274 56 aa7.47□□□□□ -1.21
Ssh1-204ENSMUST00000159592 Tenm1Q9WTS4 2731 aa7.47□□□□□ -1.21
Ssh1-204ENSMUST00000159592 Tenm4Q3UHK6 2771 aa7.43□□□□□ -1.22
Ssh1-204ENSMUST00000159592 Muc4Q8JZM8 3443 aa7.43□□□□□ -1.22
Ssh1-204ENSMUST00000159592 Gm2696A0A1W2P709 240 aa7.37□□□□□ -1.23
Ssh1-204ENSMUST00000159592 Gm20537G3UYK7 97 aa7.34□□□□□ -1.23
Ssh1-204ENSMUST00000159592 Fbn1Q61554 2873 aaKnown RBP7.28□□□□□ -1.24
Ssh1-204ENSMUST00000159592 LystP97412 3788 aa7.26□□□□□ -1.25
Ssh1-204ENSMUST00000159592 Gm21887J3QQ04 176 aa7.22□□□□□ -1.25
Ssh1-204ENSMUST00000159592 Gm9112A2AI92 75 aa7.21□□□□□ -1.25
Ssh1-204ENSMUST00000159592 Ank2Q8C8R3 3898 aa7.2□□□□□ -1.26
Ssh1-204ENSMUST00000159592 Gm5965D3Z724 196 aa7.19□□□□□ -1.26
Ssh1-204ENSMUST00000159592 CubnQ9JLB4 3623 aa7.15□□□□□ -1.26
Ssh1-204ENSMUST00000159592 VwfQ8CIZ8 2813 aa7.15□□□□□ -1.27
Ssh1-204ENSMUST00000159592 2310079G19RikQ9D6L6 185 aa7.14□□□□□ -1.27
Ssh1-204ENSMUST00000159592 Megf8P60882 2789 aa7.09□□□□□ -1.28
Ssh1-204ENSMUST00000159592 Gm40193A0A1B0GT39 78 aa7.08□□□□□ -1.28
Ssh1-204ENSMUST00000159592 2310057N15RikQ9D6T8 200 aa7.07□□□□□ -1.28
Ssh1-204ENSMUST00000159592 A930033H14RikG5E8X6 103 aa7.05□□□□□ -1.28
Ssh1-204ENSMUST00000159592 Tnp1P10856 55 aa7.03□□□□□ -1.28
Ssh1-204ENSMUST00000159592 Tenm2Q9WTS5 2764 aa7.02□□□□□ -1.28
Ssh1-204ENSMUST00000159592 B930094E09RikQ8C4T2 136 aa7.02□□□□□ -1.29
Ssh1-204ENSMUST00000159592 Col7a1Q63870 2944 aa6.99□□□□□ -1.29
Ssh1-204ENSMUST00000159592 Prm2P07978 107 aa6.9□□□□□ -1.3
Ssh1-204ENSMUST00000159592 Hspg2Q05793 3707 aaKnown RBP6.87□□□□□ -1.31
Ssh1-204ENSMUST00000159592 Csmd3Q80T79 3707 aa6.86□□□□□ -1.31
Ssh1-204ENSMUST00000159592 Xirp2Q4U4S6 3784 aa6.86□□□□□ -1.31
Ssh1-204ENSMUST00000159592 BsnO88737 3942 aa6.83□□□□□ -1.32
Ssh1-204ENSMUST00000159592 Gm9736A0A1W2P7N1 277 aa6.78□□□□□ -1.32
Ssh1-204ENSMUST00000159592 Gm17416Q30KP4 66 aa6.72□□□□□ -1.33
Ssh1-204ENSMUST00000159592 Muc6Q80T03 2850 aa6.66□□□□□ -1.34
Ssh1-204ENSMUST00000159592 2210017I01RikA0A0A6YVV1 95 aa6.65□□□□□ -1.35
Ssh1-204ENSMUST00000159592 Gm17402F6Z0L5 76 aa6.57□□□□□ -1.36
Ssh1-204ENSMUST00000159592 Gm11939A2A592 99 aa6.56□□□□□ -1.36
Ssh1-204ENSMUST00000159592 Gm9918Q8BUR5 174 aa6.53□□□□□ -1.36
Ssh1-204ENSMUST00000159592 Krtap3-2Q9D638 99 aa6.45□□□□□ -1.38
Ssh1-204ENSMUST00000159592 Krtap3-3Q9D7P0 99 aa6.45□□□□□ -1.38
Ssh1-204ENSMUST00000159592 Gm10318A0A1W2P728 225 aa6.45□□□□□ -1.38
Ssh1-204ENSMUST00000159592 Dnah7bL7N1Y0 4068 aa6.38□□□□□ -1.39
Ssh1-204ENSMUST00000159592 Huwe1Q7TMY8 4377 aaKnown RBP6.37□□□□□ -1.39
Ssh1-204ENSMUST00000159592 Krtap13-1Q8K198 168 aa6.36□□□□□ -1.39
Ssh1-204ENSMUST00000159592 Gm19668J3QMD1 248 aa6.36□□□□□ -1.39
Ssh1-204ENSMUST00000159592 Krtap3-1A2A591 98 aa6.32□□□□□ -1.4
Ssh1-204ENSMUST00000159592 Dnah14A0A140LIJ4 4489 aa6.31□□□□□ -1.4
Ssh1-204ENSMUST00000159592 Krtap19-5O08632 62 aa6.31□□□□□ -1.4
Ssh1-204ENSMUST00000159592 Crct1Q6PAI5 102 aa6.26□□□□□ -1.41
Ssh1-204ENSMUST00000159592 Dnah10D3YYQ8 4591 aa6.12□□□□□ -1.43
Ssh1-204ENSMUST00000159592 Kmt2aP55200 3966 aa6.11□□□□□ -1.43
Ssh1-204ENSMUST00000159592 Dnah3Q8BW94 4083 aa6.11□□□□□ -1.43
Ssh1-204ENSMUST00000159592 4933428G20RikQ9D3X4 101 aa6.09□□□□□ -1.43
Ssh1-204ENSMUST00000159592 PrkdcP97313 4128 aa6.07□□□□□ -1.44
Ssh1-204ENSMUST00000159592 Vps13bQ80TY5 3993 aa6.04□□□□□ -1.44
Ssh1-204ENSMUST00000159592 Dnah6E9Q0B6 4144 aa6.01□□□□□ -1.45
Ssh1-204ENSMUST00000159592 Dnah11E9Q7N9 4488 aa6.01□□□□□ -1.45
Ssh1-204ENSMUST00000159592 Krtap7-1Q9D3I6 87 aa5.95□□□□□ -1.46
Ssh1-204ENSMUST00000159592 Dnah17Q69Z23 4481 aa5.93□□□□□ -1.46
Ssh1-204ENSMUST00000159592 Dnah7cA0A087WR13 4024 aa5.85□□□□□ -1.47
Ssh1-204ENSMUST00000159592 Sprr2a3Q4KL71 83 aa5.85□□□□□ -1.47
Ssh1-204ENSMUST00000159592 Sprr2a1Q9CQK8 83 aa5.85□□□□□ -1.47
Ssh1-204ENSMUST00000159592 Dnah5Q8VHE6 4621 aa5.83□□□□□ -1.48
Ssh1-204ENSMUST00000159592 Vps13dB1ART2 4390 aa5.82□□□□□ -1.48
Ssh1-204ENSMUST00000159592 Krtap1-5A2A590 122 aa5.81□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms