RNA–Protein interactions for RNA: ENSMUST00000108364.7

Sptbn4-204, Transcript of Spectrin beta chain, mousemouse

TSL 1 (best) BASIC

Gene Sptbn4, Length 4,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-204ENSMUST00000108364 Zfhx4Q9JJN2 3550 aa9.49□□□□□ -0.89
Sptbn4-204ENSMUST00000108364 9530053A07RikE9PVG8 2581 aa9.45□□□□□ -0.9
Sptbn4-204ENSMUST00000108364 Lama5Q61001 3718 aa9.41□□□□□ -0.9
Sptbn4-204ENSMUST00000108364 Gm4491E0CX42 125 aa9.41□□□□□ -0.9
Sptbn4-204ENSMUST00000108364 Muc5acE9QAQ8 3455 aa9.41□□□□□ -0.9
Sptbn4-204ENSMUST00000108364 Srrm2Q8BTI8 2703 aaKnown RBP9.4□□□□□ -0.9
Sptbn4-204ENSMUST00000108364 CriptO70333 101 aa9.39□□□□□ -0.91
Sptbn4-204ENSMUST00000108364 Gm17349F7BGH6 99 aa9.39□□□□□ -0.91
Sptbn4-204ENSMUST00000108364 Krtap29-1A2A5X4 342 aa9.36□□□□□ -0.91
Sptbn4-204ENSMUST00000108364 2310061N02RikQ9D6S9 174 aa9.34□□□□□ -0.91
Sptbn4-204ENSMUST00000108364 Krtap13O88375 197 aa9.27□□□□□ -0.93
Sptbn4-204ENSMUST00000108364 Gm9955Q8CEJ8 102 aa9.27□□□□□ -0.93
Sptbn4-204ENSMUST00000108364 2310050C09RikG5E8Z3 280 aa9.24□□□□□ -0.93
Sptbn4-204ENSMUST00000108364 OtogO55225 2910 aa9.19□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 Gm9507D3Z5T3 223 aa9.19□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 Svep1A2AVA0 3567 aa9.18□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 OxtP35454 125 aa9.18□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 Krtap14O08640 167 aa9.18□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 Cmya5Q70KF4 3739 aa9.17□□□□□ -0.94
Sptbn4-204ENSMUST00000108364 FcgbpE9Q0B5 2583 aa9.08□□□□□ -0.96
Sptbn4-204ENSMUST00000108364 Muc4Q8JZM8 3443 aa9.06□□□□□ -0.96
Sptbn4-204ENSMUST00000108364 Tenm4Q3UHK6 2771 aa9.06□□□□□ -0.96
Sptbn4-204ENSMUST00000108364 Krtap10-4Q08EG8 221 aa9.06□□□□□ -0.96
Sptbn4-204ENSMUST00000108364 Tnp2P11378 117 aa9.04□□□□□ -0.96
Sptbn4-204ENSMUST00000108364 Romo1P60603 79 aa8.98□□□□□ -0.97
Sptbn4-204ENSMUST00000108364 Rpl37Q9D823 97 aa8.97□□□□□ -0.97
Sptbn4-204ENSMUST00000108364 Krtap15-1Q9QZU5 150 aa8.96□□□□□ -0.98
Sptbn4-204ENSMUST00000108364 D6Ertd527eA0A0N4SWI3 464 aa8.93□□□□□ -0.98
Sptbn4-204ENSMUST00000108364 Gm10382Q3V0T5 144 aa8.88□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Cox6b2Q80ZN9 88 aa8.88□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Krtap10-10A0A1W2P7T6 217 aa8.87□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Gm5767A0A0J9YTU8 78 aa8.85□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Ndufaf8A2AMZ4 74 aa8.85□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Spink7Q6IE32 76 aa8.84□□□□□ -0.99
Sptbn4-204ENSMUST00000108364 Tenm1Q9WTS4 2731 aa8.82□□□□□ -1
Sptbn4-204ENSMUST00000108364 Rps29P62274 56 aa8.7□□□□□ -1.02
Sptbn4-204ENSMUST00000108364 Fam229aB2KGE5 128 aa8.68□□□□□ -1.02
Sptbn4-204ENSMUST00000108364 Fbn1Q61554 2873 aaKnown RBP8.68□□□□□ -1.02
Sptbn4-204ENSMUST00000108364 Gm2696A0A1W2P709 240 aa8.66□□□□□ -1.02
Sptbn4-204ENSMUST00000108364 Gm9112A2AI92 75 aa8.65□□□□□ -1.02
Sptbn4-204ENSMUST00000108364 Gm20537G3UYK7 97 aa8.64□□□□□ -1.03
Sptbn4-204ENSMUST00000108364 2310079G19RikQ9D6L6 185 aa8.64□□□□□ -1.03
Sptbn4-204ENSMUST00000108364 VwfQ8CIZ8 2813 aa8.6□□□□□ -1.03
Sptbn4-204ENSMUST00000108364 Gm19426M0QWC7 77 aa8.6□□□□□ -1.03
Sptbn4-204ENSMUST00000108364 Csmd2V9GX34 3611 aa8.59□□□□□ -1.04
Sptbn4-204ENSMUST00000108364 BC029722A0A0N4SW31 51 aa8.57□□□□□ -1.04
Sptbn4-204ENSMUST00000108364 LystP97412 3788 aa8.57□□□□□ -1.04
Sptbn4-204ENSMUST00000108364 A930033H14RikG5E8X6 103 aa8.54□□□□□ -1.04
Sptbn4-204ENSMUST00000108364 Sec61bQ9CQS8 96 aaKnown RBP8.54□□□□□ -1.04
Sptbn4-204ENSMUST00000108364 Prm2P07978 107 aa8.5□□□□□ -1.05
Sptbn4-204ENSMUST00000108364 Ank2Q8C8R3 3898 aa8.48□□□□□ -1.05
Sptbn4-204ENSMUST00000108364 Camk2n1Q6QWF9 78 aa8.48□□□□□ -1.05
Sptbn4-204ENSMUST00000108364 Tenm2Q9WTS5 2764 aa8.42□□□□□ -1.06
Sptbn4-204ENSMUST00000108364 Col7a1Q63870 2944 aa8.39□□□□□ -1.07
Sptbn4-204ENSMUST00000108364 CubnQ9JLB4 3623 aa8.38□□□□□ -1.07
Sptbn4-204ENSMUST00000108364 Gm5965D3Z724 196 aa8.32□□□□□ -1.08
Sptbn4-204ENSMUST00000108364 Megf8P60882 2789 aa8.27□□□□□ -1.09
Sptbn4-204ENSMUST00000108364 Gm21887J3QQ04 176 aa8.26□□□□□ -1.09
Sptbn4-204ENSMUST00000108364 Gm40193A0A1B0GT39 78 aa8.19□□□□□ -1.1
Sptbn4-204ENSMUST00000108364 Muc6Q80T03 2850 aa8.14□□□□□ -1.11
Sptbn4-204ENSMUST00000108364 Xirp2Q4U4S6 3784 aa8.13□□□□□ -1.11
Sptbn4-204ENSMUST00000108364 B930094E09RikQ8C4T2 136 aa8.1□□□□□ -1.11
Sptbn4-204ENSMUST00000108364 Krtap3-2Q9D638 99 aa8.1□□□□□ -1.11
Sptbn4-204ENSMUST00000108364 Krtap3-3Q9D7P0 99 aa8.1□□□□□ -1.11
Sptbn4-204ENSMUST00000108364 Gm9918Q8BUR5 174 aa8.07□□□□□ -1.12
Sptbn4-204ENSMUST00000108364 Gm11939A2A592 99 aa8.07□□□□□ -1.12
Sptbn4-204ENSMUST00000108364 2310057N15RikQ9D6T8 200 aa8.02□□□□□ -1.13
Sptbn4-204ENSMUST00000108364 Dnah14A0A140LIJ4 4489 aa8.01□□□□□ -1.13
Sptbn4-204ENSMUST00000108364 Gm9736A0A1W2P7N1 277 aa8□□□□□ -1.13
Sptbn4-204ENSMUST00000108364 Gm17416Q30KP4 66 aa7.97□□□□□ -1.13
Sptbn4-204ENSMUST00000108364 BsnO88737 3942 aa7.96□□□□□ -1.14
Sptbn4-204ENSMUST00000108364 Hspg2Q05793 3707 aaKnown RBP7.93□□□□□ -1.14
Sptbn4-204ENSMUST00000108364 2210017I01RikA0A0A6YVV1 95 aa7.87□□□□□ -1.15
Sptbn4-204ENSMUST00000108364 Csmd3Q80T79 3707 aa7.85□□□□□ -1.15
Sptbn4-204ENSMUST00000108364 Tnp1P10856 55 aa7.77□□□□□ -1.17
Sptbn4-204ENSMUST00000108364 Dnah10D3YYQ8 4591 aa7.76□□□□□ -1.17
Sptbn4-204ENSMUST00000108364 Huwe1Q7TMY8 4377 aaKnown RBP7.7□□□□□ -1.18
Sptbn4-204ENSMUST00000108364 Dnah17Q69Z23 4481 aa7.69□□□□□ -1.18
Sptbn4-204ENSMUST00000108364 Krtap3-1A2A591 98 aa7.66□□□□□ -1.18
Sptbn4-204ENSMUST00000108364 Gm17402F6Z0L5 76 aa7.65□□□□□ -1.18
Sptbn4-204ENSMUST00000108364 Dnah7bL7N1Y0 4068 aa7.64□□□□□ -1.19
Sptbn4-204ENSMUST00000108364 Krtap19-5O08632 62 aa7.61□□□□□ -1.19
Sptbn4-204ENSMUST00000108364 Dnah11E9Q7N9 4488 aa7.55□□□□□ -1.2
Sptbn4-204ENSMUST00000108364 Krtap13-1Q8K198 168 aa7.54□□□□□ -1.2
Sptbn4-204ENSMUST00000108364 Dnah5Q8VHE6 4621 aa7.53□□□□□ -1.2
Sptbn4-204ENSMUST00000108364 PlecQ9QXS1 4691 aaKnown RBP7.48□□□□□ -1.21
Sptbn4-204ENSMUST00000108364 Gm10318A0A1W2P728 225 aa7.44□□□□□ -1.22
Sptbn4-204ENSMUST00000108364 Dnah9B1AR51 4484 aa7.42□□□□□ -1.22
Sptbn4-204ENSMUST00000108364 Vps13dB1ART2 4390 aa7.39□□□□□ -1.23
Sptbn4-204ENSMUST00000108364 Dnah3Q8BW94 4083 aa7.35□□□□□ -1.23
Sptbn4-204ENSMUST00000108364 Stard9Q80TF6 4561 aa7.3□□□□□ -1.24
Sptbn4-204ENSMUST00000108364 Krtap7-1Q9D3I6 87 aa7.25□□□□□ -1.25
Sptbn4-204ENSMUST00000108364 Gm19668J3QMD1 248 aa7.24□□□□□ -1.25
Sptbn4-204ENSMUST00000108364 Crct1Q6PAI5 102 aa7.23□□□□□ -1.25
Sptbn4-204ENSMUST00000108364 Kmt2aP55200 3966 aa7.23□□□□□ -1.25
Sptbn4-204ENSMUST00000108364 Lrp1bQ9JI18 4599 aa7.22□□□□□ -1.25
Sptbn4-204ENSMUST00000108364 ApobE9Q414 4505 aa7.17□□□□□ -1.26
Sptbn4-204ENSMUST00000108364 Dnah2P0C6F1 4456 aa7.17□□□□□ -1.26
Sptbn4-204ENSMUST00000108364 TnxbO35452 4006 aa7.16□□□□□ -1.26
Sptbn4-204ENSMUST00000108364 Dync2h1Q45VK7 4306 aa7.15□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms