RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 TrioQ0KL02 3102 aa9.49□□□□□ -0.89
Gtf3c4-204ENSMUST00000171404 Col12a1Q60847 3120 aa9.49□□□□□ -0.89
Gtf3c4-204ENSMUST00000171404 Krtap13O88375 197 aa9.49□□□□□ -0.89
Gtf3c4-204ENSMUST00000171404 Krtap10-4Q08EG8 221 aa9.48□□□□□ -0.89
Gtf3c4-204ENSMUST00000171404 Nbeal1E9PYP2 2688 aa9.46□□□□□ -0.89
Gtf3c4-204ENSMUST00000171404 Zfp292Q9Z2U2 2698 aa9.46□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Mki67E9PVX6 3177 aaKnown RBP9.45□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Cdh23Q99PF4 3354 aa9.45□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Gm3646F6S692 53 aa9.45□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Sec61bQ9CQS8 96 aaKnown RBP9.44□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Usp24B1AY13 2617 aaKnown RBP9.43□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Gm9195A0A140LHT4 2805 aa9.43□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Krtap29-1A2A5X4 342 aa9.42□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Romo1P60603 79 aa9.42□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 HrnrQ8VHD8 2496 aa9.42□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Gm19426M0QWC7 77 aa9.42□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Gm5767A0A0J9YTU8 78 aa9.41□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 2310050C09RikG5E8Z3 280 aa9.41□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 Gm16253D3Z167 63 aa9.4□□□□□ -0.9
Gtf3c4-204ENSMUST00000171404 A730071L15RikQ8C4X0 137 aa9.4□□□□□ -0.91
Gtf3c4-204ENSMUST00000171404 Rpl37Q9D823 97 aa9.36□□□□□ -0.91
Gtf3c4-204ENSMUST00000171404 AtrQ9JKK8 2635 aa9.35□□□□□ -0.91
Gtf3c4-204ENSMUST00000171404 Celsr3Q91ZI0 3301 aa9.35□□□□□ -0.91
Gtf3c4-204ENSMUST00000171404 Krtap10-10A0A1W2P7T6 217 aa9.34□□□□□ -0.91
Gtf3c4-204ENSMUST00000171404 Gm10382Q3V0T5 144 aa9.32□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 PcntP48725 2898 aa9.3□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 Rev3lQ61493 3122 aa9.3□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 Gm11565A2A4M7 156 aa9.29□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 BC029722A0A0N4SW31 51 aa9.28□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 FlnbQ80X90 2602 aaKnown RBP9.27□□□□□ -0.92
Gtf3c4-204ENSMUST00000171404 Ankrd11E9Q4F7 2643 aa9.23□□□□□ -0.93
Gtf3c4-204ENSMUST00000171404 Szt2A2A9C3 3431 aa9.23□□□□□ -0.93
Gtf3c4-204ENSMUST00000171404 Lama2Q60675 3118 aaKnown RBP9.2□□□□□ -0.94
Gtf3c4-204ENSMUST00000171404 Prrc2cQ3TLH4 2846 aaKnown RBP9.2□□□□□ -0.94
Gtf3c4-204ENSMUST00000171404 FlnaQ8BTM8 2647 aaKnown RBP9.16□□□□□ -0.94
Gtf3c4-204ENSMUST00000171404 FasnP19096 2504 aaKnown RBP9.16□□□□□ -0.94
Gtf3c4-204ENSMUST00000171404 Unc80Q8BLN6 3261 aa9.14□□□□□ -0.95
Gtf3c4-204ENSMUST00000171404 HttP42859 3119 aa9.13□□□□□ -0.95
Gtf3c4-204ENSMUST00000171404 Krtap14O08640 167 aa9.1□□□□□ -0.95
Gtf3c4-204ENSMUST00000171404 BptfA2A654 3036 aaKnown RBP9.09□□□□□ -0.95
Gtf3c4-204ENSMUST00000171404 Akap13E9Q394 2776 aa9.09□□□□□ -0.95
Gtf3c4-204ENSMUST00000171404 Myo18bE9PV66 2605 aa9.09□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Cfap54Q8C6S9 3106 aa9.08□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Gm2696A0A1W2P709 240 aa9.07□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Dmxl1Q6PNC0 3013 aa9.06□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Tnp2P11378 117 aa9.06□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 4933415A04RikQ9D443 101 aa9.04□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 NipblQ6KCD5 2798 aaKnown RBP9.04□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Gm7173A0A0G2JEB6 3132 aa9.03□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Hectd1Q69ZR2 2618 aaKnown RBP9.02□□□□□ -0.96
Gtf3c4-204ENSMUST00000171404 Fn1P11276 2477 aaKnown RBP9.01□□□□□ -0.97
Gtf3c4-204ENSMUST00000171404 Gcn1E9PVA8 2671 aaKnown RBP9.01□□□□□ -0.97
Gtf3c4-204ENSMUST00000171404 MgaA2AWL7 3003 aaKnown RBP8.98□□□□□ -0.97
Gtf3c4-204ENSMUST00000171404 Gm2310J3QNJ2 377 aa8.97□□□□□ -0.97
Gtf3c4-204ENSMUST00000171404 Vps13aQ5H8C4 3166 aa8.97□□□□□ -0.97
Gtf3c4-204ENSMUST00000171404 2310057N15RikQ9D6T8 200 aa8.95□□□□□ -0.98
Gtf3c4-204ENSMUST00000171404 Frem2Q6NVD0 3160 aa8.95□□□□□ -0.98
Gtf3c4-204ENSMUST00000171404 1700042G07RikB1AUF7 90 aa8.95□□□□□ -0.98
Gtf3c4-204ENSMUST00000171404 Ash1lQ99MY8 2958 aa8.9□□□□□ -0.98
Gtf3c4-204ENSMUST00000171404 2310061N02RikQ9D6S9 174 aa8.89□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 AtmQ62388 3066 aa8.89□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 Gm21887J3QQ04 176 aa8.88□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 Chd7A2AJK6 2986 aaKnown RBP8.87□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 Stab1Q8R4Y4 2571 aa8.86□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 Igsf10Q3V1M1 2594 aa8.85□□□□□ -0.99
Gtf3c4-204ENSMUST00000171404 Brca2P97929 3329 aa8.84□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Ndufaf8A2AMZ4 74 aa8.81□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Cox6b2Q80ZN9 88 aa8.81□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Myo15aQ9QZZ4 3511 aa8.8□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Dchs2A0A0A6YW72 3346 aa8.78□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Gm5965D3Z724 196 aa8.77□□□□□ -1
Gtf3c4-204ENSMUST00000171404 Itpr3P70227 2670 aa8.75□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Col6a3E9PWQ3 3284 aa8.75□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Vps13cQ8BX70 3748 aa8.73□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Rps29P62274 56 aa8.73□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Map1aQ9QYR6 2776 aa8.72□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 D6Ertd527eA0A0N4SWI3 464 aa8.72□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Notch1Q01705 2531 aa8.72□□□□□ -1.01
Gtf3c4-204ENSMUST00000171404 Celsr1O35161 3034 aa8.7□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 KalrnA2CG49 2964 aa8.69□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 Kmt2bO08550 2713 aa8.69□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 AspmQ8CJ27 3122 aa8.69□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 Chd6A3KFM7 2711 aa8.68□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 Mast4Q811L6 2618 aa8.66□□□□□ -1.02
Gtf3c4-204ENSMUST00000171404 FrylF8VQ05 3007 aa8.64□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Lama1P19137 3084 aa8.62□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Dchs1E9PVD3 3291 aa8.61□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Lrrc37aB1AWG4 3215 aa8.59□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 VcanQ62059 3357 aa8.59□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Fbn2Q61555 2907 aa8.59□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 SpegQ62407 3262 aa8.59□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Tnp1P10856 55 aa8.59□□□□□ -1.03
Gtf3c4-204ENSMUST00000171404 Wdfy4E9Q2M9 3149 aa8.58□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 Tnrc18Q80WC3 2878 aa8.58□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 FryE9Q8I9 3020 aa8.57□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 Nbeal2Q6ZQA0 2742 aa8.57□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 Wdfy3Q6VNB8 3508 aa8.56□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 9530053A07RikE9PVG8 2581 aa8.53□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 SmcpP15265 143 aa8.53□□□□□ -1.04
Gtf3c4-204ENSMUST00000171404 Myo15bI7HPW8 3033 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 78.4 ms