RNA–Protein interactions for RNA: ENSMUST00000111045.8

Bdnf-205, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,973 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-205ENSMUST00000111045 Defb18Q30KP5 85 aa8.35□□□□□ -1.07
Bdnf-205ENSMUST00000111045 Hectd1Q69ZR2 2618 aaKnown RBP8.35□□□□□ -1.07
Bdnf-205ENSMUST00000111045 Q8BT88 171 aa8.35□□□□□ -1.07
Bdnf-205ENSMUST00000111045 Ighv2-2A0A075B5P8 116 aa8.34□□□□□ -1.07
Bdnf-205ENSMUST00000111045 P01821 116 aa8.34□□□□□ -1.07
Bdnf-205ENSMUST00000111045 Muc4Q8JZM8 3443 aa8.33□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Sprr3O09116 238 aa8.33□□□□□ -1.08
Bdnf-205ENSMUST00000111045 E130208F15RikQ3UPV3 143 aa8.33□□□□□ -1.08
Bdnf-205ENSMUST00000111045 PlaurP35456 327 aa8.33□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm17509Q9CZ61 145 aa8.33□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm9195A0A140LHT4 2805 aa8.32□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Epg5Q80TA9 2572 aa8.32□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Plac8l1Q08EJ0 177 aa8.32□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm10509O88255 85 aa8.32□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Mp68P56379 58 aa8.31□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Znf414Q9DCK4 299 aa8.31□□□□□ -1.08
Bdnf-205ENSMUST00000111045 1700012A03RikQ9DAF1 130 aa8.31□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Leap2Q91V13 76 aa8.31□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Igkv3-7A0A0G2JE31 119 aa8.3□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm12353A2AGJ4 60 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm20661K7N787 53 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm9821Q8K076 103 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Chchd10Q7TNL9 138 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm10160F6Y577 67 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Ccl21aP84444 133 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Ccl21bP86792 133 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Ccl21cP86793 133 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 4933415A04RikQ9D443 101 aa8.29□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm3646F6S692 53 aa8.28□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Gm10770F7D043 238 aa8.28□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Zfand2aQ9JII7 171 aa8.28□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Notch2O35516 2470 aa8.27□□□□□ -1.08
Bdnf-205ENSMUST00000111045 Msrb1Q9JLC3 116 aa8.27□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Camk2n2Q78WH7 79 aa8.27□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Igkv3-2A0A075B5P0 119 aa8.26□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Ighv2-9-1A0A075B697 116 aa8.26□□□□□ -1.09
Bdnf-205ENSMUST00000111045 U90926O08546 118 aa8.26□□□□□ -1.09
Bdnf-205ENSMUST00000111045 C130032M10RikQ8C888 123 aa8.26□□□□□ -1.09
Bdnf-205ENSMUST00000111045 OxtP35454 125 aa8.25□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Gm4707V9GXN5 68 aa8.25□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Mrpl34Q99N91 92 aa8.25□□□□□ -1.09
Bdnf-205ENSMUST00000111045 PrcdQ00LT2 53 aa8.24□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Gm9767G3X930 207 aa8.24□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Gm10226O88253 85 aa8.24□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Prr9Q8BV84 116 aa8.24□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Ly6c2P0CW03 131 aa8.23□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Igkv3-12A0A140T8P0 119 aa8.23□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Cep192E9Q4Y4 2514 aaKnown RBP8.22□□□□□ -1.09
Bdnf-205ENSMUST00000111045 A330070K13RikQ8CA53 115 aa8.22□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Igkv8-19A0A0G2JFN8 121 aa8.21□□□□□ -1.09
Bdnf-205ENSMUST00000111045 Gm44790A0A0N4SV91 103 aa8.2□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Igkv8-28A0A0G2JE47 121 aa8.19□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Muc2Q80Z19 2680 aa8.19□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Ighv2-9A0A075B5Q5 116 aa8.19□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Limd2Q8BGB5 128 aa8.18□□□□□ -1.1
Bdnf-205ENSMUST00000111045 HrnrQ8VHD8 2496 aa8.17□□□□□ -1.1
Bdnf-205ENSMUST00000111045 P84750 121 aa8.17□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Srsf12Q8C8K3 266 aa8.17□□□□□ -1.1
Bdnf-205ENSMUST00000111045 FlnaQ8BTM8 2647 aaKnown RBP8.17□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Phf5aP83870 110 aaKnown RBP8.16□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Igkv3-4A0A140T8Q4 119 aa8.15□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Lelp1Q9DAE3 120 aa8.15□□□□□ -1.1
Bdnf-205ENSMUST00000111045 Usp9yF8VPU6 2556 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Fam104aA2A6P4 185 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Cox6a2P43023 97 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Elof1P60003 83 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Rnase1P00683 149 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Ubr5Q80TP3 2792 aa8.14□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Csmd2V9GX34 3611 aa8.13□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Gm21886J3QJU9 214 aa8.13□□□□□ -1.11
Bdnf-205ENSMUST00000111045 FlnbQ80X90 2602 aaKnown RBP8.13□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Utp20Q5XG71 2788 aaKnown RBP8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Q8BGJ3 129 aa8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Itpr3P70227 2670 aa8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 FlncQ8VHX6 2726 aaKnown RBP8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Phxr5P08399 672 aa8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Usp24B1AY13 2617 aaKnown RBP8.12□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Spata3Q9D9T6 193 aa8.11□□□□□ -1.11
Bdnf-205ENSMUST00000111045 PrlhG3UWC3 86 aa8.1□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Gm20538F6Z9R1 75 aa8.1□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Chtf8P0CG14 533 aa8.1□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Wfdc15aQ8BH89 80 aa8.1□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Cypt15B1AXS0 87 aa8.09□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Defb2P82020 71 aa8.09□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Chchd7Q8K2Q5 85 aa8.09□□□□□ -1.11
Bdnf-205ENSMUST00000111045 Reg3bP35230 175 aa8.09□□□□□ -1.11
Bdnf-205ENSMUST00000111045 A930009A15RikG3UYI6 118 aa8.08□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Defb13Q8R2I4 64 aa8.08□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Defb50Q6TU36 73 aa8.07□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Gpha2Q925Q5 128 aa8.07□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Gm16181B0V2H2 73 aa8.07□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Smim29Q8R043 75 aa8.07□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Rpl37aP61514 92 aa8.05□□□□□ -1.12
Bdnf-205ENSMUST00000111045 MobpQ9D2P8 170 aa8.05□□□□□ -1.12
Bdnf-205ENSMUST00000111045 1700018G05RikA0A1B0GSI2 66 aa8.04□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Cypt14J3QPF7 87 aa8.04□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Tep1P97499 2629 aa8.04□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Gm7276Q3TYW4 209 aa8.03□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Pla2g10Q9QXX3 151 aa8.03□□□□□ -1.12
Bdnf-205ENSMUST00000111045 Tcl1b5P56845 121 aa8.03□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 76.6 ms