RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Tet1Q3URK3 2007 aaKnown RBP7.76□□□□□ -1.17
Vcan-202ENSMUST00000109544 Coa6Q8BGD8 79 aa7.76□□□□□ -1.17
Vcan-202ENSMUST00000109544 Notch4P31695 1964 aa7.76□□□□□ -1.17
Vcan-202ENSMUST00000109544 Rps28P62858 69 aaKnown RBP7.75□□□□□ -1.17
Vcan-202ENSMUST00000109544 Q9DAB9 146 aa7.75□□□□□ -1.17
Vcan-202ENSMUST00000109544 Csdc2Q91YQ3 154 aa7.75□□□□□ -1.17
Vcan-202ENSMUST00000109544 Pcdh15Q99PJ1 1943 aa7.74□□□□□ -1.17
Vcan-202ENSMUST00000109544 Pla2g2cP48076 150 aa7.74□□□□□ -1.17
Vcan-202ENSMUST00000109544 4930432M17RikQ3V0W9 174 aa7.74□□□□□ -1.17
Vcan-202ENSMUST00000109544 Spint4Q9D263 159 aa7.74□□□□□ -1.17
Vcan-202ENSMUST00000109544 Gm10570F6VB42 170 aa7.74□□□□□ -1.17
Vcan-202ENSMUST00000109544 Wfdc13Q5DQQ6 81 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 CdsnQ7TPC1 561 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 AgrnA2ASQ1 1950 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Ighv2-5A0A0A6YY69 116 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Nup210Q9QY81 1886 aaKnown RBP7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Ncor1Q60974 2453 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Ighv1-56A0A0A6YXG2 117 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Cd164Q9R0L9 197 aa7.73□□□□□ -1.17
Vcan-202ENSMUST00000109544 Gm26566Q8CAC1 153 aa7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 CrygfQ9CXV3 174 aa7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 Pla2g1bQ9Z0Y2 146 aa7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 SnurfQ9WU12 71 aa7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 Tanc2A2A690 1994 aa7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 HelzQ6DFV5 1964 aaKnown RBP7.72□□□□□ -1.17
Vcan-202ENSMUST00000109544 Fer1l4A3KGK3 1992 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 Gm10135F6TEE5 83 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 B230217C12RikE9Q3Z1 139 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 Cdip1Q9DB75 208 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 Ighv8-13A0A075B5Y0 101 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 BC025920Q3US60 128 aa7.71□□□□□ -1.18
Vcan-202ENSMUST00000109544 Limd2Q8BGB5 128 aa7.7□□□□□ -1.18
Vcan-202ENSMUST00000109544 Sdk1Q3UH53 2193 aa7.69□□□□□ -1.18
Vcan-202ENSMUST00000109544 Igkv8-19A0A0G2JFN8 121 aa7.69□□□□□ -1.18
Vcan-202ENSMUST00000109544 Chchd10Q7TNL9 138 aa7.69□□□□□ -1.18
Vcan-202ENSMUST00000109544 Crip3Q6Q6R3 243 aa7.69□□□□□ -1.18
Vcan-202ENSMUST00000109544 Ighv2-2A0A075B5P8 116 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 P01821 116 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 4930518I15RikQ3V2W7 57 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 Zfand2aQ9JII7 171 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 Crip2Q9DCT8 208 aaKnown RBP7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 NrgnP60761 78 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 Spink13Q3UTS8 97 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 Znf575Q3TXZ1 239 aa7.68□□□□□ -1.18
Vcan-202ENSMUST00000109544 Rtl10D3YWW5 146 aa7.67□□□□□ -1.18
Vcan-202ENSMUST00000109544 Wnk1P83741 2377 aa7.67□□□□□ -1.18
Vcan-202ENSMUST00000109544 Gm10197F6QEY5 67 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 Odf3l2Q3TZ65 277 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 Bean1Q9EQG5 255 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 A930009A15RikG3UYI6 118 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 CrygeQ03740 174 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 Cspg4Q8VHY0 2327 aa7.66□□□□□ -1.18
Vcan-202ENSMUST00000109544 Defb38Q7TNV7 63 aa7.65□□□□□ -1.18
Vcan-202ENSMUST00000109544 AcanQ61282 2132 aaKnown RBP7.65□□□□□ -1.18
Vcan-202ENSMUST00000109544 Gvin1Q80SU7 2427 aa7.65□□□□□ -1.18
Vcan-202ENSMUST00000109544 Tet2Q4JK59 1912 aaKnown RBP7.65□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm28230A0A0A0MQ91 144 aa7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 TroQ6DIC6 2087 aa7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm12216A0A1W2P827 62 aa7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 Q9DAA7 145 aa7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm10160F6Y577 67 aa7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 Sorl1O88307 2215 aaKnown RBP7.64□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm3443F7CCV5 94 aa7.63□□□□□ -1.19
Vcan-202ENSMUST00000109544 Wisp2Q9Z0G4 251 aa7.63□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm43218A0A0G2JGT0 114 aa7.63□□□□□ -1.19
Vcan-202ENSMUST00000109544 D730001G18RikA0A087WQU7 115 aa7.62□□□□□ -1.19
Vcan-202ENSMUST00000109544 Krtap16-1A2A5X5 502 aa7.62□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm17606F6ZL36 78 aa7.62□□□□□ -1.19
Vcan-202ENSMUST00000109544 Wdr90Q6ZPG2 1874 aa7.62□□□□□ -1.19
Vcan-202ENSMUST00000109544 DysfQ9ESD7 2090 aa7.62□□□□□ -1.19
Vcan-202ENSMUST00000109544 Wfdc17Q5SSJ1 76 aa7.61□□□□□ -1.19
Vcan-202ENSMUST00000109544 3110070M22RikQ9DAQ7 118 aa7.61□□□□□ -1.19
Vcan-202ENSMUST00000109544 P01819 144 aa7.61□□□□□ -1.19
Vcan-202ENSMUST00000109544 Znf580Q9DB38 172 aa7.61□□□□□ -1.19
Vcan-202ENSMUST00000109544 Med13lQ6JPI3 2207 aa7.6□□□□□ -1.19
Vcan-202ENSMUST00000109544 Fam19a3Q7TPG6 132 aa7.6□□□□□ -1.19
Vcan-202ENSMUST00000109544 Cox6a2P43023 97 aa7.6□□□□□ -1.19
Vcan-202ENSMUST00000109544 Cd164l2Q9D6W7 172 aa7.6□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm9767G3X930 207 aa7.59□□□□□ -1.19
Vcan-202ENSMUST00000109544 Adm2Q7TNK8 150 aa7.59□□□□□ -1.19
Vcan-202ENSMUST00000109544 SonQ9QX47 2444 aaKnown RBP7.59□□□□□ -1.19
Vcan-202ENSMUST00000109544 Mrpl34Q99N91 92 aa7.59□□□□□ -1.19
Vcan-202ENSMUST00000109544 Gm5464Q3UY29 175 aa7.59□□□□□ -1.2
Vcan-202ENSMUST00000109544 Wfdc3Q14AE4 130 aa7.58□□□□□ -1.2
Vcan-202ENSMUST00000109544 Gm28374F6SG70 93 aa7.58□□□□□ -1.2
Vcan-202ENSMUST00000109544 Pcnx2Q5DU28 2122 aa7.58□□□□□ -1.2
Vcan-202ENSMUST00000109544 6430550D23RikE9Q1X6 194 aa7.57□□□□□ -1.2
Vcan-202ENSMUST00000109544 Defb45Q3V490 66 aa7.57□□□□□ -1.2
Vcan-202ENSMUST00000109544 Gm16485Q8C4B7 115 aa7.57□□□□□ -1.2
Vcan-202ENSMUST00000109544 DscamQ9ERC8 2013 aa7.57□□□□□ -1.2
Vcan-202ENSMUST00000109544 Msrb1Q9JLC3 116 aa7.57□□□□□ -1.2
Vcan-202ENSMUST00000109544 Reg3aO09037 175 aa7.56□□□□□ -1.2
Vcan-202ENSMUST00000109544 A530084C06RikQ3UTW2 186 aa7.56□□□□□ -1.2
Vcan-202ENSMUST00000109544 Prr9Q8BV84 116 aa7.55□□□□□ -1.2
Vcan-202ENSMUST00000109544 Adamts20P59511 1906 aa7.55□□□□□ -1.2
Vcan-202ENSMUST00000109544 Lce6aD3YV94 81 aa7.55□□□□□ -1.2
Vcan-202ENSMUST00000109544 4930519P11RikQ9CUJ8 166 aa7.55□□□□□ -1.2
Vcan-202ENSMUST00000109544 Piezo1E2JF22 2547 aa7.53□□□□□ -1.2
Vcan-202ENSMUST00000109544 Gm9903Q8C9Y8 129 aa7.53□□□□□ -1.2
Vcan-202ENSMUST00000109544 Brwd1Q921C3 2304 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 79.4 ms