RNA–Protein interactions for RNA: ENSMUST00000187424.1

Msh3-205, Transcript of DNA mismatch repair protein Msh3, mousemouse

TSL 2 BASIC

Gene Msh3, Length 666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-205ENSMUST00000187424 Ighv1-61P01749 117 aa10.48□□□□□ -0.73
Msh3-205ENSMUST00000187424 Gm1968Q3T9I3 115 aa10.48□□□□□ -0.73
Msh3-205ENSMUST00000187424 Trav3-3Q5R1C3 114 aa10.47□□□□□ -0.73
Msh3-205ENSMUST00000187424 BaalcQ8VHV1 145 aa10.47□□□□□ -0.73
Msh3-205ENSMUST00000187424 Q3UNZ8 350 aa10.46□□□□□ -0.73
Msh3-205ENSMUST00000187424 Gm5617Q91VN2 117 aa10.46□□□□□ -0.73
Msh3-205ENSMUST00000187424 OtorQ9JIE3 128 aa10.46□□□□□ -0.73
Msh3-205ENSMUST00000187424 4930546C10RikE9Q4Y3 121 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Hist1h2bmP10854 126 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Rab5bP61021 215 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Hist1h2bhQ64478 126 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Hist2h2bbQ64525 126 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Tnfsf18Q7TS55 173 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Chchd1Q9CQA6 118 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 4930556J24RikQ9D4U7 146 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Fam241bQ9D882 120 aa10.45□□□□□ -0.74
Msh3-205ENSMUST00000187424 Gm10542F6XDR3 90 aa10.44□□□□□ -0.74
Msh3-205ENSMUST00000187424 Bsph1Q3UW26 133 aa10.44□□□□□ -0.74
Msh3-205ENSMUST00000187424 Srsf9Q9D0B0 222 aaKnown RBP10.44□□□□□ -0.74
Msh3-205ENSMUST00000187424 Trav9n-4A0A075B631 113 aa10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 SeboxP70368 190 aa10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 Ceacam12Q3UKP4 300 aa10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 Ifitm10Q8BR26 201 aa10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 Tmem223Q9CQE2 199 aaKnown RBP10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 Higd1aQ9JLR9 95 aa10.43□□□□□ -0.74
Msh3-205ENSMUST00000187424 Plpp2Q9DAX2 276 aa10.42□□□□□ -0.74
Msh3-205ENSMUST00000187424 Ube2d1P61080 147 aaKnown RBP10.41□□□□□ -0.74
Msh3-205ENSMUST00000187424 3110070M22RikQ9DAQ7 118 aa10.41□□□□□ -0.74
Msh3-205ENSMUST00000187424 Timm17aQ9Z0V8 171 aa10.41□□□□□ -0.74
Msh3-205ENSMUST00000187424 Ighv2-9A0A075B5Q5 116 aa10.4□□□□□ -0.74
Msh3-205ENSMUST00000187424 Ighv2-9-1A0A075B697 116 aa10.4□□□□□ -0.74
Msh3-205ENSMUST00000187424 Pkhd1l1Q80ZA4 4249 aa10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Igkv3-12A0A140T8P0 119 aa10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Gm10130F6ZHM5 101 aa10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 CnbpP53996 178 aaKnown RBP10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Gm10837Q3UTT8 145 aa10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Ndufa12Q7TMF3 145 aaKnown RBP10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Timm10bQ9WV96 100 aa10.39□□□□□ -0.75
Msh3-205ENSMUST00000187424 Trav13d-4A0A0G2JFX3 110 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Gm42420A0A0J9YUQ2 99 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Krtap13O88375 197 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 TcraP01849 138 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Gng4P50153 75 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 NpyP57774 97 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Sprr1bQ62267 153 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Mrps10Q80ZK0 160 aaKnown RBP10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 SpinklQ8CEK3 90 aa10.38□□□□□ -0.75
Msh3-205ENSMUST00000187424 Aqp7O54794 303 aa10.37□□□□□ -0.75
Msh3-205ENSMUST00000187424 Igkv2-137A0A0B4J1H6 120 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Trdv2-1A0A0G2JGB9 116 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Gm45521A0A1B0GRK0 198 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Esp24A8R0V6 68 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Stard4Q99JV5 224 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 SmagpQ99KC7 97 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Ankrd39Q9D2X0 183 aa10.35□□□□□ -0.75
Msh3-205ENSMUST00000187424 Trav13-4-dv7A0A075B6C2 110 aa10.34□□□□□ -0.75
Msh3-205ENSMUST00000187424 Fgf6P21658 208 aa10.34□□□□□ -0.75
Msh3-205ENSMUST00000187424 RetnlaQ9EP95 111 aa10.34□□□□□ -0.75
Msh3-205ENSMUST00000187424 Pgpep1Q9ESW8 209 aa10.34□□□□□ -0.75
Msh3-205ENSMUST00000187424 Igkv4-92A0A0B4J1I2 117 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 Tmem238A9JSM3 176 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 Ndufa1O35683 70 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 P01896 185 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 Rab24P35290 203 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 PlnP61014 52 aa10.33□□□□□ -0.76
Msh3-205ENSMUST00000187424 P18527 97 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 Defa9P50707 93 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 Tmem170bP86050 132 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 Gm1553Q66VB7 94 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 4930519P11RikQ9CUJ8 166 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 Mfap4Q9D1H9 257 aa10.32□□□□□ -0.76
Msh3-205ENSMUST00000187424 P01794 123 aa10.31□□□□□ -0.76
Msh3-205ENSMUST00000187424 Prss58Q8BW11 241 aa10.31□□□□□ -0.76
Msh3-205ENSMUST00000187424 Ube2wQ8VDW4 151 aa10.31□□□□□ -0.76
Msh3-205ENSMUST00000187424 Rpl13aP19253 203 aaKnown RBP10.3□□□□□ -0.76
Msh3-205ENSMUST00000187424 Gm10842Q3U587 122 aa10.3□□□□□ -0.76
Msh3-205ENSMUST00000187424 9430069I07RikQ9CX21 111 aa10.3□□□□□ -0.76
Msh3-205ENSMUST00000187424 Defa10P50708 93 aa10.29□□□□□ -0.76
Msh3-205ENSMUST00000187424 ScxQ64124 207 aa10.29□□□□□ -0.76
Msh3-205ENSMUST00000187424 Ovol2Q8CIV7 274 aa10.27□□□□□ -0.77
Msh3-205ENSMUST00000187424 Sec11aQ9R0P6 179 aa10.27□□□□□ -0.77
Msh3-205ENSMUST00000187424 BC106179Q8C9L1 186 aa10.26□□□□□ -0.77
Msh3-205ENSMUST00000187424 Ighv1-56A0A0A6YXG2 117 aa10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 Esp34G3UXG0 151 aa10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 Sprr1aQ62266 144 aa10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 Rbm7Q9CQT2 265 aaKnown RBP10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 1700012A03RikQ9DAF1 130 aa10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 Fat3Q8BNA6 4555 aa10.25□□□□□ -0.77
Msh3-205ENSMUST00000187424 Trav11A0A0B4J1J9 114 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 Cib3Q0P523 160 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 BB014433Q8C5R5 389 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 Sprr4Q8CGN8 76 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 Q9D727 114 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 Zfand2aQ9JII7 171 aa10.24□□□□□ -0.77
Msh3-205ENSMUST00000187424 A730009L09RikA0A1B0GS82 72 aa10.23□□□□□ -0.77
Msh3-205ENSMUST00000187424 Mpv17l2Q8VIK2 200 aa10.23□□□□□ -0.77
Msh3-205ENSMUST00000187424 Tomm6Q9CQN3 74 aa10.23□□□□□ -0.77
Msh3-205ENSMUST00000187424 Ss18l2Q9D174 77 aa10.23□□□□□ -0.77
Msh3-205ENSMUST00000187424 Ighv1-62-1A0A075B5U3 116 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms