RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Gm45521A0A1B0GRK0 198 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 Aqp7O54794 303 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 SeboxP70368 190 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 3110070M22RikQ9DAQ7 118 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 P18527 97 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 Ube2d1P61080 147 aaKnown RBP13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 Esp24A8R0V6 68 aa13.31□□□□□ -0.28
Lig3-209ENSMUST00000173009 4930546C10RikE9Q4Y3 121 aa13.31□□□□□ -0.28
Lig3-209ENSMUST00000173009 Tomm6Q9CQN3 74 aa13.31□□□□□ -0.28
Lig3-209ENSMUST00000173009 Cited4Q9WUL8 182 aa13.31□□□□□ -0.28
Lig3-209ENSMUST00000173009 U90926O08546 118 aa13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Cib3Q0P523 160 aa13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Trav3-3Q5R1C3 114 aa13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Gm1553Q66VB7 94 aa13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Tmem223Q9CQE2 199 aaKnown RBP13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Ankrd39Q9D2X0 183 aa13.29□□□□□ -0.28
Lig3-209ENSMUST00000173009 Gm9376G3UW68 176 aa13.28□□□□□ -0.28
Lig3-209ENSMUST00000173009 Ndufv3Q8BK30 104 aaKnown RBP13.28□□□□□ -0.28
Lig3-209ENSMUST00000173009 Q9DAQ5 155 aa13.28□□□□□ -0.28
Lig3-209ENSMUST00000173009 Dnah7cA0A087WR13 4024 aa13.27□□□□□ -0.28
Lig3-209ENSMUST00000173009 Trdv2-1A0A0G2JGB9 116 aa13.27□□□□□ -0.29
Lig3-209ENSMUST00000173009 Rab24P35290 203 aa13.27□□□□□ -0.29
Lig3-209ENSMUST00000173009 Q9D727 114 aa13.27□□□□□ -0.29
Lig3-209ENSMUST00000173009 Wfdc21Q8BTE6 63 aa13.26□□□□□ -0.29
Lig3-209ENSMUST00000173009 Trav9n-4A0A075B631 113 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 Ighv1-61P01749 117 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 Krtap10-4Q08EG8 221 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 Scgb1b11A0A087WQJ0 93 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 SpxD3Z752 116 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 Wfdc3Q14AE4 130 aa13.25□□□□□ -0.29
Lig3-209ENSMUST00000173009 Trav13d-4A0A0G2JFX3 110 aa13.24□□□□□ -0.29
Lig3-209ENSMUST00000173009 Gm11213A0A1B0GR83 88 aa13.24□□□□□ -0.29
Lig3-209ENSMUST00000173009 Fam213bQ9DB60 201 aa13.24□□□□□ -0.29
Lig3-209ENSMUST00000173009 Nupr2Q497P3 102 aa13.23□□□□□ -0.29
Lig3-209ENSMUST00000173009 Chac1Q8R3J5 223 aa13.23□□□□□ -0.29
Lig3-209ENSMUST00000173009 Trav13-4-dv7A0A075B6C2 110 aa13.22□□□□□ -0.29
Lig3-209ENSMUST00000173009 Dnah9B1AR51 4484 aa13.22□□□□□ -0.29
Lig3-209ENSMUST00000173009 Ighv2-9-1A0A075B697 116 aa13.22□□□□□ -0.29
Lig3-209ENSMUST00000173009 Defa1P11477 93 aa13.21□□□□□ -0.29
Lig3-209ENSMUST00000173009 Srsf9Q9D0B0 222 aaKnown RBP13.21□□□□□ -0.29
Lig3-209ENSMUST00000173009 Josd1Q9DBJ6 202 aa13.21□□□□□ -0.29
Lig3-209ENSMUST00000173009 Sec11aQ9R0P6 179 aa13.21□□□□□ -0.29
Lig3-209ENSMUST00000173009 Tcrg-V4A0A0B4J1J8 138 aa13.2□□□□□ -0.3
Lig3-209ENSMUST00000173009 BC106179Q8C9L1 186 aa13.2□□□□□ -0.3
Lig3-209ENSMUST00000173009 Dnah11E9Q7N9 4488 aa13.19□□□□□ -0.3
Lig3-209ENSMUST00000173009 H2al1nQ497L1 109 aa13.19□□□□□ -0.3
Lig3-209ENSMUST00000173009 Defa16P50714 93 aa13.18□□□□□ -0.3
Lig3-209ENSMUST00000173009 Sprr1bQ62267 153 aa13.18□□□□□ -0.3
Lig3-209ENSMUST00000173009 Ovol2Q8CIV7 274 aa13.18□□□□□ -0.3
Lig3-209ENSMUST00000173009 Mpv17l2Q8VIK2 200 aa13.18□□□□□ -0.3
Lig3-209ENSMUST00000173009 Gm28305F6U473 122 aa13.17□□□□□ -0.3
Lig3-209ENSMUST00000173009 SpinklQ8CEK3 90 aa13.17□□□□□ -0.3
Lig3-209ENSMUST00000173009 Fndc10A2A9Q0 223 aa13.17□□□□□ -0.3
Lig3-209ENSMUST00000173009 Fgf6P21658 208 aa13.16□□□□□ -0.3
Lig3-209ENSMUST00000173009 4930556J24RikQ9D4U7 146 aa13.16□□□□□ -0.3
Lig3-209ENSMUST00000173009 Mfap4Q9D1H9 257 aa13.15□□□□□ -0.3
Lig3-209ENSMUST00000173009 Vps13dB1ART2 4390 aa13.15□□□□□ -0.3
Lig3-209ENSMUST00000173009 LeprotO89013 131 aa13.15□□□□□ -0.31
Lig3-209ENSMUST00000173009 P01896 185 aa13.15□□□□□ -0.31
Lig3-209ENSMUST00000173009 Gm5617Q91VN2 117 aa13.15□□□□□ -0.31
Lig3-209ENSMUST00000173009 Plac8Q9JI48 112 aa13.15□□□□□ -0.31
Lig3-209ENSMUST00000173009 Hspb8Q9JK92 196 aa13.15□□□□□ -0.31
Lig3-209ENSMUST00000173009 Cox8bP48772 70 aa13.14□□□□□ -0.31
Lig3-209ENSMUST00000173009 Grcc10O35127 126 aa13.13□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ndufa12Q7TMF3 145 aaKnown RBP13.13□□□□□ -0.31
Lig3-209ENSMUST00000173009 Rbm7Q9CQT2 265 aaKnown RBP13.13□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ighv2-9A0A075B5Q5 116 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ctxnd2A0A1B0GQX3 59 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 Brd3osA0A1B0GRB6 84 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 PscaP57096 123 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 Prss58Q8BW11 241 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 BaalcQ8VHV1 145 aa13.12□□□□□ -0.31
Lig3-209ENSMUST00000173009 Trav11A0A0B4J1J9 114 aa13.11□□□□□ -0.31
Lig3-209ENSMUST00000173009 Defb40Q70KL2 73 aa13.11□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ss18l2Q9D174 77 aa13.11□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ndufa1O35683 70 aa13.1□□□□□ -0.31
Lig3-209ENSMUST00000173009 Gpx1P11352 201 aa13.1□□□□□ -0.31
Lig3-209ENSMUST00000173009 Tmem97Q8VD00 176 aa13.1□□□□□ -0.31
Lig3-209ENSMUST00000173009 Slc25a2Q99ML6 265 aa13.1□□□□□ -0.31
Lig3-209ENSMUST00000173009 Gm45717A0A1B0GT68 152 aa13.09□□□□□ -0.31
Lig3-209ENSMUST00000173009 Gm28374F6SG70 93 aa13.09□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ighv1-62-1A0A075B5U3 116 aa13.09□□□□□ -0.31
Lig3-209ENSMUST00000173009 Gm20458E9PXJ7 78 aa13.09□□□□□ -0.31
Lig3-209ENSMUST00000173009 Ryr3A2AGL3 4863 aa13.09□□□□□ -0.31
Lig3-209ENSMUST00000173009 Tmem238A9JSM3 176 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 Igkv3-12A0A140T8P0 119 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 Mustn1Q99JI1 82 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 9430069I07RikQ9CX21 111 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 Fgf23Q9EPC2 251 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 Zfand2aQ9JII7 171 aa13.07□□□□□ -0.32
Lig3-209ENSMUST00000173009 Trav8-1A0A075B641 109 aa13.06□□□□□ -0.32
Lig3-209ENSMUST00000173009 Gm4064A0A087WR82 380 aa13.06□□□□□ -0.32
Lig3-209ENSMUST00000173009 Gm10352B2RWR6 380 aa13.06□□□□□ -0.32
Lig3-209ENSMUST00000173009 Rbmy1a1O35698 380 aa13.06□□□□□ -0.32
Lig3-209ENSMUST00000173009 Rbmy1bQ60990 380 aa13.06□□□□□ -0.32
Lig3-209ENSMUST00000173009 Igkv4-92A0A0B4J1I2 117 aa13.05□□□□□ -0.32
Lig3-209ENSMUST00000173009 P01823 113 aa13.05□□□□□ -0.32
Lig3-209ENSMUST00000173009 Foxi2Q3I5G5 311 aa13.05□□□□□ -0.32
Lig3-209ENSMUST00000173009 Znf664Q4VA44 261 aa13.05□□□□□ -0.32
Lig3-209ENSMUST00000173009 IqcjQ8BPW0 110 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms