RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Igkv3-1A0A075B5P1 119 aa14□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 A0A1Y7VMQ4 148 aa14□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Atxn7l1Q9CZ05 146 aa14□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Zfp951A0A087WRH0 451 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Q3UNZ8 350 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Trav3-3Q5R1C3 114 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Ifi27l2bQ8VC49 283 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Plpp2Q9DAX2 276 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 HilpdaQ9JLS0 64 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Gm13030A2APQ6 143 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Cend1Q9JKC6 149 aa13.99□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Igll1P20764 209 aa13.98□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Cdc42se2Q8BGH7 84 aa13.98□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Gm21693J3QK27 380 aa13.97□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Gm1968Q3T9I3 115 aa13.97□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Fam19a4Q7TPG5 135 aa13.96□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Gm9747Q810H1 104 aa13.96□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Pam16Q9CQV1 125 aa13.96□□□□□ -0.17
Ssbp4-201ENSMUST00000049908 Gng4P50153 75 aa13.94□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Gm16485Q8C4B7 115 aa13.94□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Tm4sf20Q9CQY8 226 aa13.94□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Pla2g2eQ9QUL3 142 aa13.94□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Fat1A0A1L1SQU7 4645 aa13.94□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 EnhoQ8K1D8 76 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 MobpQ9D2P8 170 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Plac8Q9JI48 112 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Igkv4-79A0A075B5L8 119 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Scgb1b11A0A087WQJ0 93 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 PscaP57096 123 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Bud31Q6PGH1 103 aa13.93□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Higd1aQ9JLR9 95 aa13.92□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 NpyP57774 97 aa13.91□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Timm17aQ9Z0V8 171 aa13.91□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Ighv2-6-8A0A0A6YWY9 116 aa13.9□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Cfap126Q6P8X9 189 aa13.9□□□□□ -0.18
Ssbp4-201ENSMUST00000049908 Prh1P05142 261 aa13.89□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 PlnP61014 52 aa13.89□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Ighv1-72P01751 139 aa13.88□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Trav7-6A0A075B640 112 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Gm20458E9PXJ7 78 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Cd33Q63994 403 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Wfdc21Q8BTE6 63 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Bak1O08734 209 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Prp2P05143 317 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Ifitm10Q8BR26 201 aa13.87□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Scgb1b3J3QJY4 93 aa13.86□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Tfpi2O35536 230 aa13.86□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Q9DAQ5 155 aa13.86□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Ighv13-2A0A0A6YWN3 119 aa13.85□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Krtap11-1E9Q2E9 183 aa13.85□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Scgb1b19F6WYW0 93 aa13.85□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Pkhd1E9PZ36 4059 aa13.84□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Cib3Q0P523 160 aa13.84□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Psmb2Q9R1P3 201 aa13.84□□□□□ -0.19
Ssbp4-201ENSMUST00000049908 Igkv6-13A0A0G2JGY3 119 aa13.83□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 4930546C10RikE9Q4Y3 121 aa13.83□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm11444F6QMA6 170 aa13.83□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Tmem223Q9CQE2 199 aaKnown RBP13.83□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Fam213bQ9DB60 201 aa13.83□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Ccl17F6R5P4 103 aa13.82□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 TcraP01849 138 aa13.82□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Ube2d1P61080 147 aaKnown RBP13.82□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 3110070M22RikQ9DAQ7 118 aa13.82□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Pgpep1Q9ESW8 209 aa13.82□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm11027G8JL69 66 aa13.81□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Defa15P50713 93 aa13.81□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Tmem170bP86050 132 aa13.81□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm11213A0A1B0GR83 88 aa13.8□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm45521A0A1B0GRK0 198 aa13.8□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Ighv1-61P01749 117 aa13.8□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Ssbp1Q9CYR0 152 aaKnown RBP13.8□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm10542F6XDR3 90 aa13.79□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Gm9376G3UW68 176 aa13.79□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Cox8bP48772 70 aa13.79□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Ighv2-9-1A0A075B697 116 aa13.78□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Trdv2-1A0A0G2JGB9 116 aa13.78□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Defa1P11477 93 aa13.78□□□□□ -0.2
Ssbp4-201ENSMUST00000049908 Igkv2-137A0A0B4J1H6 120 aa13.77□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Trav9n-4A0A075B631 113 aa13.76□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Gm1553Q66VB7 94 aa13.76□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Defb40Q70KL2 73 aa13.76□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Tomm6Q9CQN3 74 aa13.76□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Ankrd39Q9D2X0 183 aa13.75□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 A0A286YCQ8 80 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 P01794 123 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 P18527 97 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Esp24A8R0V6 68 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Chac1Q8R3J5 223 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Gm5617Q91VN2 117 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Sec11aQ9R0P6 179 aa13.74□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Sprr1bQ62267 153 aa13.73□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Rpl13aP19253 203 aaKnown RBP13.72□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Isg15Q64339 161 aaKnown RBP13.72□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 BC106179Q8C9L1 186 aa13.72□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Ovol2Q8CIV7 274 aa13.72□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 Krtap13O88375 197 aa13.71□□□□□ -0.21
Ssbp4-201ENSMUST00000049908 BaalcQ8VHV1 145 aa13.7□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Trav13d-4A0A0G2JFX3 110 aa13.69□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 SpinklQ8CEK3 90 aa13.69□□□□□ -0.22
Ssbp4-201ENSMUST00000049908 Tnp2P11378 117 aa13.68□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms