RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 OdaphJ3QNT8 126 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tmem213Q08EA8 116 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Nup210lQ9D2F7 1881 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm14137Q8CE97 175 aa9.58□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Frem1Q684R7 2191 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Defb18Q30KP5 85 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Camk2n2Q78WH7 79 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Nlrc5C3VPR6 1915 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Rpl39P62892 51 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Eif4ebp1Q60876 117 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tnfrsf23Q9ER63 176 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm17472A0A075B683 117 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Igkv3-5A0A140T8M6 119 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Cfap126Q6P8X9 189 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 MylkQ6PDN3 1941 aaKnown RBP9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ormdl1Q921I0 153 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Wfdc15bQ9JHY4 80 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Eml5Q8BQM8 1977 aa9.57□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Fam222aQ6PGH4 453 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Nsun4C4P6S0 806 aaKnown RBP9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 P0C913 63 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Brk1Q91VR8 75 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ighv1-11A0A0A6YWI9 117 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Trbv13-1A0A0B4J1P8 112 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm15128A2ADW8 449 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Luzp4B1AV09 449 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm15107B1B0X0 449 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm15085Q62012 449 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Sptbn1Q62261 2363 aaKnown RBP9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Zfp407G3UVV3 2246 aa9.56□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm15557A6PWY0 234 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Fxyd5P97808 178 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 CstadQ9D245 104 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tmem131O70472 1877 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Qrich2A0A140LIY9 2337 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ighv2-7A0A075B5Q8 116 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Vpreb2P13373 142 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Abca1P41233 2261 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Trav7-6A0A075B640 112 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tmem254aP0DN89 123 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tmem254bP0DN90 123 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Tmem254cP0DN91 123 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 BlcapP62951 87 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm5468Q8C3D3 155 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Adamts9E9PUN6 1931 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 A230072I06RikQ3UUJ8 172 aa9.55□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Cfap46E9Q2C0 2641 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Cep250Q60952 2414 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Cacna1eQ61290 2272 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Trav13d-4A0A0G2JFX3 110 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm21060J3KMU4 56 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm10735Q3US96 136 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Odf3Q920N1 254 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm15127B1AVZ5 449 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Fgf6P21658 208 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Prop1P97458 223 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Odf3l1Q810P2 275 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 9130230L23RikQ8CC80 163 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ighv2-6A0A075B6A7 116 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm37389A0A0A6YW05 95 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Trav13n-1A0A0G2JEU8 110 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Cryba4Q9JJV0 196 aa9.54□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Armcx4E9PWM3 2356 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ighv12-3A0A075B5T1 117 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 1700012A03RikQ9DAF1 130 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Fam208bQ5DTT3 2382 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ndufc1Q9CQY9 76 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ptprz1B9EKR1 2312 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Greb1Q3UHK3 1954 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm6034E9Q101 117 aa9.53□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Gm20708H3BKF4 155 aa9.52□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Crip1P63254 77 aa9.52□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Ube2aQ9Z255 152 aa9.52□□□□□ -0.88
Ssh1-202ENSMUST00000112298 Zfand3Q497H0 227 aa9.52□□□□□ -0.89
Ssh1-202ENSMUST00000112298 1810032O08RikE9PZV8 113 aa9.52□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm17577J3QNF7 156 aa9.52□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Vwa8Q8CC88 1905 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Ndufa4l2Q4FZG9 87 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Naa38Q9D2U5 125 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Ncor2Q9WU42 2472 aaKnown RBP9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Tax1bp3Q9DBG9 124 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Prr14lE9Q7C4 1971 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Snai3Q9QY31 287 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Rai1Q61818 1889 aa9.51□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm5878E9PUB3 99 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 CrygdP04342 174 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Pla2g2aP31482 146 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 SptssbQ925E8 76 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Prh1P05142 261 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Rpl18aP62717 176 aaKnown RBP9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm9949Q8C9F4 104 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Trav13-2A0A075B649 110 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Igkv1-88A0A140T8N1 120 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm42674D3YUT9 64 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Vpreb3D3Z6J4 130 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Ighv1-75A0A075B5Y2 117 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 MsmpB1AWI6 139 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm3618D3Z4P5 127 aa9.5□□□□□ -0.89
Ssh1-202ENSMUST00000112298 P01729 129 aa9.49□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Trav13d-1A0A075B606 110 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 69 ms