RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm9970F6ZED4 185 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Egr2P08152 470 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 CtrlQ9ER05 264 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Gm2564F6Z9S8 108 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Usmg5Q78IK2 58 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ndufa11Q9D8B4 141 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Cryba4Q9JJV0 196 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Igkv4-57-1A0A075B5M4 119 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Gm3285A0A1W2P7U0 201 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Rpl32-psP17932 135 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 BlcapP62951 87 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 4930415O20RikQ8CDT5 131 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 RetnQ99P87 114 aa9.78□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Defa7P50705 93 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ndufa4l2Q4FZG9 87 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm16223Q8CBM3 117 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm15217A2CG07 155 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Defa25Q5G864 92 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Rnf185Q91YT2 192 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Odf3l1Q810P2 275 aa9.77□□□□□ -0.85
Clcn3-201ENSMUST00000004430 BptfA2A654 3036 aaKnown RBP9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ang4Q3TMQ6 144 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Rnf183Q8QZS5 190 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ighv1-4A0A075B5T4 117 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Rbmy1bQ60990 380 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Celsr1O35161 3034 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 P01837 106 aa9.76□□□□□ -0.85
Clcn3-201ENSMUST00000004430 P01725 110 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Cd27P41272 250 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm14137Q8CE97 175 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Pfn2Q9JJV2 140 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ube2wQ8VDW4 151 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Triap1Q9D8Z2 76 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Snai3Q9QY31 287 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm7257D3YX25 99 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 P01748 117 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 P01750 117 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ifi27l2aQ8R412 90 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Cxcl14Q9WUQ5 99 aa9.75□□□□□ -0.85
Clcn3-201ENSMUST00000004430 GalmQ8K157 342 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm884A2A9H6 3643 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 TrrapQ80YV3 2565 aaKnown RBP9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Trav13d-1A0A075B606 110 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Trav7-6A0A075B640 112 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 P01747 120 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Fam19a4Q7TPG5 135 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 A530064D06RikQ8BNV8 229 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Shisa9Q9CZN4 424 aa9.74□□□□□ -0.85
Clcn3-201ENSMUST00000004430 2310009B15RikA0A0A6YWI4 143 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Defa20Q45VN2 95 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Defa23Q5G866 93 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ighv1-64A0A075B5X3 117 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm26566Q8CAC1 153 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Spink12Q9D256 87 aa9.73□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Zc2hc1bQ9D534 172 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Tspan13Q9D8C2 204 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Vps13cQ8BX70 3748 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 E030018B13RikJ3QMS9 113 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Defa4P28311 92 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Mpv17l2Q8VIK2 200 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ash1lQ99MY8 2958 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ndufs7Q9DC70 224 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ttc28Q80XJ3 2450 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ighv1-50A0A075B5W1 117 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Gm7102J3QQ10 178 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Klk1b4P00757 256 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Fhl1P97447 280 aaKnown RBP9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Dkk4Q8VEJ3 221 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Ss18l2Q9D174 77 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Myo15bI7HPW8 3033 aa9.72□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Igkv4-70A0A0B4J1I5 116 aa9.71□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Chchd5Q9CQP3 110 aa9.71□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Tomm7Q9D173 55 aa9.71□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Hbb-b2P02089 147 aa9.71□□□□□ -0.85
Clcn3-201ENSMUST00000004430 Trav4n-4A0A075B615 110 aa9.71□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Igkv4-74A0A0B4J1I3 119 aa9.71□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Mrpl35Q9CQL6 188 aa9.71□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Setd2E9Q5F9 2537 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm20481G3UXK4 153 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 KalrnA2CG49 2964 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gatd1Q8BFQ8 220 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Klk5Q9D140 293 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Q9DAQ5 155 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 MtorQ9JLN9 2549 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Trav9-2A0A075B647 113 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Ighv1-49A0A0A6YWX2 117 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Trav9-4A0A0B4J1K2 113 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Tmem101Q91VP7 257 aa9.7□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gata4Q08369 441 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Mapk1ip1lQ8BH93 242 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm6793B2RXM2 351 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 P01753 117 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Edn3P48299 214 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Tmem263Q9DAM7 115 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Obox8V9GWY9 217 aa9.69□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Ighv5-8A0A075B676 92 aa9.68□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Defb29Q8BGW9 78 aa9.68□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Hist1h4aP62806 103 aaKnown RBP9.68□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Ighv1-12A0A0A6YXJ9 117 aa9.68□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Synj2bpQ9D6K5 145 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 120.8 ms