RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR54, Length 86 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR54	snR54	YUR1	P26725	428 aa		3.15	□□□□□ -1.91
snR54	snR54	COQ3	P27680	312 aa		3.15	□□□□□ -1.91
snR54	snR54	PLC1	P32383	869 aa		3.15	□□□□□ -1.91
snR54	snR54	YMR124W	P39523	943 aa	Known RBP	3.15	□□□□□ -1.91
snR54	snR54	MAM1	P40065	302 aa		3.15	□□□□□ -1.91
snR54	snR54	CIN1	P40987	1014 aa		3.15	□□□□□ -1.91
snR54	snR54	PLM2	Q04383	521 aa		3.15	□□□□□ -1.91
snR54	snR54	PHM6	Q05637	104 aa		3.15	□□□□□ -1.91
snR54	snR54	RAD34	Q06665	692 aa		3.15	□□□□□ -1.91
snR54	snR54	YOR389W	Q08912	624 aa		3.15	□□□□□ -1.91
snR54	snR54	PSF3	Q12146	194 aa		3.15	□□□□□ -1.91
snR54	snR54	YER175W-A	Q8TGU4	54 aa		3.15	□□□□□ -1.91
snR54	snR54	CET1	O13297	549 aa	Predicted RBP	3.14	□□□□□ -1.91
snR54	snR54	GAL4	P04386	881 aa		3.14	□□□□□ -1.91
snR54	snR54	YCR061W	P25639	631 aa		3.14	□□□□□ -1.91
snR54	snR54	RPS7A	P26786	190 aa	Known RBP	3.14	□□□□□ -1.91
snR54	snR54	SPC97	P38863	823 aa		3.14	□□□□□ -1.91
snR54	snR54	LNP1	P38878	278 aa		3.14	□□□□□ -1.91
snR54	snR54	SCS2	P40075	244 aa	Known RBP	3.14	□□□□□ -1.91
snR54	snR54	EMP65	P40085	556 aa		3.14	□□□□□ -1.91
snR54	snR54	MEP2	P41948	499 aa		3.14	□□□□□ -1.91
snR54	snR54	CIR1	P42940	261 aa		3.14	□□□□□ -1.91
snR54	snR54	TRS31	Q03337	283 aa		3.14	□□□□□ -1.91
snR54	snR54	ENT2	Q05785	613 aa		3.14	□□□□□ -1.91
snR54	snR54	PFA4	Q12006	378 aa		3.14	□□□□□ -1.91
snR54	snR54	NUR1	Q12066	484 aa		3.14	□□□□□ -1.91
snR54	snR54	SLX4	Q12098	748 aa		3.14	□□□□□ -1.91
snR54	snR54	AIM44	Q99299	758 aa		3.14	□□□□□ -1.91
snR54	snR54	PHO3	P24031	467 aa		3.13	□□□□□ -1.91
snR54	snR54	KES1	P35844	434 aa	Known RBP	3.13	□□□□□ -1.91
snR54	snR54	ERV46	P39727	415 aa		3.13	□□□□□ -1.91
snR54	snR54	SSP120	P39931	234 aa	Known RBP	3.13	□□□□□ -1.91
snR54	snR54	ARB1	P40024	610 aa	Known RBP	3.13	□□□□□ -1.91
snR54	snR54	VFA1	P40080	203 aa		3.13	□□□□□ -1.91
snR54	snR54	LAS21	P40367	830 aa		3.13	□□□□□ -1.91
snR54	snR54	CFD1	P40558	293 aa		3.13	□□□□□ -1.91
snR54	snR54	PEX14	P53112	341 aa		3.13	□□□□□ -1.91
snR54	snR54	RPL15B	P54780	204 aa	Predicted RBP	3.13	□□□□□ -1.91
snR54	snR54	ACS1	Q01574	713 aa		3.13	□□□□□ -1.91
snR54	snR54	CRF1	Q04930	467 aa		3.13	□□□□□ -1.91
snR54	snR54	YPT1	P01123	206 aa	Known RBP	3.12	□□□□□ -1.91
snR54	snR54	YCP4	P25349	247 aa	Known RBP	3.12	□□□□□ -1.91
snR54	snR54	PRP45	P28004	379 aa	Predicted RBP	3.12	□□□□□ -1.91
snR54	snR54	PXL1	P36166	706 aa		3.12	□□□□□ -1.91
snR54	snR54	RRP8	P38961	392 aa	Known RBP	3.12	□□□□□ -1.91
snR54	snR54	IMA5	P40884	581 aa		3.12	□□□□□ -1.91
snR54	snR54	STB2	P46679	850 aa		3.12	□□□□□ -1.91
snR54	snR54	POL31	P46957	487 aa		3.12	□□□□□ -1.91
snR54	snR54	AAT1	Q01802	451 aa		3.12	□□□□□ -1.91
snR54	snR54	LYS21	Q12122	440 aa	Known RBP	3.12	□□□□□ -1.91
snR54	snR54	SES1	P07284	462 aa	Known RBP	3.11	□□□□□ -1.91
snR54	snR54	ILS1	P09436	1072 aa	Known RBP	3.11	□□□□□ -1.91
snR54	snR54	ADH4	P10127	382 aa		3.11	□□□□□ -1.91
snR54	snR54	RPT3	P33298	428 aa	Known RBP	3.11	□□□□□ -1.91
snR54	snR54	TGL1	P34163	548 aa		3.11	□□□□□ -1.91
snR54	snR54	UBP7	P40453	1071 aa		3.11	□□□□□ -1.91
snR54	snR54	LYS20	P48570	428 aa	Known RBP	3.11	□□□□□ -1.91
snR54	snR54	ARA2	Q04212	335 aa		3.11	□□□□□ -1.91
snR54	snR54	MRPL1	Q04599	285 aa		3.11	□□□□□ -1.91
snR54	snR54	GET3	Q12154	354 aa	Known RBP	3.11	□□□□□ -1.91
snR54	snR54	VAS1	P07806	1104 aa	Known RBP	3.1	□□□□□ -1.91
snR54	snR54	MGM1	P32266	881 aa		3.1	□□□□□ -1.91
snR54	snR54	GND1	P38720	489 aa	Known RBP	3.1	□□□□□ -1.91
snR54	snR54	YNL034W	P53963	612 aa		3.1	□□□□□ -1.91
snR54	snR54	TRI1	Q05024	226 aa		3.1	□□□□□ -1.91
snR54	snR54	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
snR54	snR54	CTT1	P06115	562 aa		3.09	□□□□□ -1.91
snR54	snR54	KGD2	P19262	463 aa	Predicted RBP	3.09	□□□□□ -1.91
snR54	snR54	GSH1	P32477	678 aa		3.09	□□□□□ -1.91
snR54	snR54	FOL1	P53848	824 aa		3.09	□□□□□ -1.91
snR54	snR54	SEC18	P18759	758 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	AIM17	P23180	465 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	ATO2	P32907	282 aa		3.08	□□□□□ -1.92
snR54	snR54	PAF1	P38351	445 aa		3.08	□□□□□ -1.92
snR54	snR54	ERC1	P38767	581 aa		3.08	□□□□□ -1.92
snR54	snR54	SWD1	P39706	426 aa		3.08	□□□□□ -1.92
snR54	snR54	SAW1	P39735	261 aa		3.08	□□□□□ -1.92
snR54	snR54	YIR016W	P40572	265 aa		3.08	□□□□□ -1.92
snR54	snR54	NOP2	P40991	618 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	PUS4	P48567	403 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	LSC1	P53598	329 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	ESF2	P53743	316 aa	Known RBP	3.08	□□□□□ -1.92
snR54	snR54	YNL058C	P53947	316 aa		3.08	□□□□□ -1.92
snR54	snR54	YAT1	P80235	687 aa		3.08	□□□□□ -1.92
snR54	snR54	SNA4	Q07549	140 aa		3.08	□□□□□ -1.92
snR54	snR54	VBA2	P38358	474 aa	Known RBP	3.07	□□□□□ -1.92
snR54	snR54	RAD26	P40352	1085 aa		3.07	□□□□□ -1.92
snR54	snR54	MDV1	P47025	714 aa		3.07	□□□□□ -1.92
snR54	snR54	NPA3	P47122	385 aa		3.07	□□□□□ -1.92
snR54	snR54	VPS64	Q03944	604 aa		3.07	□□□□□ -1.92
snR54	snR54	ILV2	P07342	687 aa	Known RBP	3.06	□□□□□ -1.92
snR54	snR54	SIP1	P32578	815 aa		3.06	□□□□□ -1.92
snR54	snR54	SDS22	P36047	338 aa		3.06	□□□□□ -1.92
snR54	snR54	SCO2	P38072	301 aa		3.06	□□□□□ -1.92
snR54	snR54	TAF5	P38129	798 aa		3.06	□□□□□ -1.92
snR54	snR54	YLF2	P38746	405 aa		3.06	□□□□□ -1.92
snR54	snR54	ASK10	P48361	1146 aa		3.06	□□□□□ -1.92
snR54	snR54	YPT11	P48559	417 aa		3.06	□□□□□ -1.92
snR54	snR54	CNM67	P53865	581 aa	Known RBP	3.06	□□□□□ -1.92
snR54	snR54	CEG1	Q01159	459 aa	Predicted RBP	3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 145.3 ms