RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W GFD1Q04839 188 aaKnown RBP1.13□□□□□ -2.23
SEC8YPR055W YDL242WQ07746 117 aa1.13□□□□□ -2.23
SEC8YPR055W BI2P03873 423 aa1.13□□□□□ -2.23
SEC8YPR055W ADE3P07245 946 aaKnown RBP1.13□□□□□ -2.23
SEC8YPR055W MRC1P25588 1096 aa1.13□□□□□ -2.23
SEC8YPR055W ECM32P32644 1121 aaKnown RBP1.13□□□□□ -2.23
SEC8YPR055W TOM20P35180 183 aa1.13□□□□□ -2.23
SEC8YPR055W ERV46P39727 415 aa1.13□□□□□ -2.23
SEC8YPR055W GLO1P50107 326 aa1.13□□□□□ -2.23
SEC8YPR055W COG2P53271 262 aa1.13□□□□□ -2.23
SEC8YPR055W ESF2P53743 316 aaKnown RBP1.13□□□□□ -2.23
SEC8YPR055W PLM2Q04383 521 aa1.13□□□□□ -2.23
SEC8YPR055W GEP3Q08622 556 aa1.13□□□□□ -2.23
SEC8YPR055W RGT2Q12300 763 aa1.13□□□□□ -2.23
SEC8YPR055W RDL1Q12305 139 aaKnown RBP1.13□□□□□ -2.23
SEC8YPR055W POL3P15436 1097 aa1.12□□□□□ -2.23
SEC8YPR055W RIT1P23796 513 aa1.12□□□□□ -2.23
SEC8YPR055W UBP7P40453 1071 aa1.12□□□□□ -2.23
SEC8YPR055W ULP2P40537 1034 aaPredicted RBP1.12□□□□□ -2.23
SEC8YPR055W HIS6P40545 261 aa1.12□□□□□ -2.23
SEC8YPR055W MET14Q02196 202 aa1.12□□□□□ -2.23
SEC8YPR055W LCB4Q12246 624 aa1.12□□□□□ -2.23
SEC8YPR055W HER1Q12276 1246 aa1.12□□□□□ -2.23
SEC8YPR055W COX1P00401 534 aa1.12□□□□□ -2.23
SEC8YPR055W GAL1P04385 528 aa1.12□□□□□ -2.23
SEC8YPR055W SST2P11972 698 aaKnown RBP1.12□□□□□ -2.23
SEC8YPR055W YCR061WP25639 631 aa1.12□□□□□ -2.23
SEC8YPR055W GSY2P27472 705 aa1.12□□□□□ -2.23
SEC8YPR055W STT3P39007 718 aaKnown RBP1.12□□□□□ -2.23
SEC8YPR055W SNM1P40993 198 aa1.12□□□□□ -2.23
SEC8YPR055W PSA1P41940 361 aaKnown RBP1.12□□□□□ -2.23
SEC8YPR055W NMD5P46970 1048 aa1.12□□□□□ -2.23
SEC8YPR055W NPA3P47122 385 aa1.12□□□□□ -2.23
SEC8YPR055W BPL1P48445 690 aaPredicted RBP1.12□□□□□ -2.23
SEC8YPR055W CNM67P53865 581 aaKnown RBP1.12□□□□□ -2.23
SEC8YPR055W VPS64Q03944 604 aa1.12□□□□□ -2.23
SEC8YPR055W BSP1Q06604 576 aa1.12□□□□□ -2.23
SEC8YPR055W ICT1Q12385 394 aa1.12□□□□□ -2.23
SEC8YPR055W TMT1P32643 299 aa1.12□□□□□ -2.23
SEC8YPR055W SDS22P36047 338 aa1.12□□□□□ -2.23
SEC8YPR055W APM3P38153 483 aa1.12□□□□□ -2.23
SEC8YPR055W YIL024CP40543 189 aa1.12□□□□□ -2.23
SEC8YPR055W CIN1P40987 1014 aa1.12□□□□□ -2.23
SEC8YPR055W QRI7P43122 407 aa1.12□□□□□ -2.23
SEC8YPR055W YGR079WP53249 370 aa1.12□□□□□ -2.23
SEC8YPR055W TEP1P53916 434 aa1.12□□□□□ -2.23
SEC8YPR055W YOL057WQ08225 711 aa1.12□□□□□ -2.23
SEC8YPR055W CRT10Q08226 957 aa1.12□□□□□ -2.23
SEC8YPR055W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SEC8YPR055W NYV1Q12255 253 aa1.12□□□□□ -2.23
SEC8YPR055W TMA7Q3E764 64 aaKnown RBP1.12□□□□□ -2.23
SEC8YPR055W SES1P07284 462 aaKnown RBP1.11□□□□□ -2.23
SEC8YPR055W GSH1P32477 678 aa1.11□□□□□ -2.23
SEC8YPR055W SIP1P32578 815 aa1.11□□□□□ -2.23
SEC8YPR055W FTH1P38310 465 aa1.11□□□□□ -2.23
SEC8YPR055W YPR003CP53394 754 aa1.11□□□□□ -2.23
SEC8YPR055W ERG13P54839 491 aaKnown RBP1.11□□□□□ -2.23
SEC8YPR055W AAT1Q01802 451 aa1.11□□□□□ -2.23
SEC8YPR055W RAD34Q06665 692 aa1.11□□□□□ -2.23
SEC8YPR055W AAD4Q07747 329 aa1.11□□□□□ -2.23
SEC8YPR055W CRC1Q12289 327 aa1.11□□□□□ -2.23
SEC8YPR055W YER145C-AA0A023PYF4 145 aa1.11□□□□□ -2.23
SEC8YPR055W ILV2P07342 687 aaKnown RBP1.11□□□□□ -2.23
SEC8YPR055W ERC1P38767 581 aa1.11□□□□□ -2.23
SEC8YPR055W SPC72P39723 622 aa1.11□□□□□ -2.23
SEC8YPR055W MAM1P40065 302 aa1.11□□□□□ -2.23
SEC8YPR055W SNO3P43544 222 aa1.11□□□□□ -2.23
SEC8YPR055W IRC7P43623 340 aa1.11□□□□□ -2.23
SEC8YPR055W AIM6Q07716 390 aa1.11□□□□□ -2.23
SEC8YPR055W ARP7Q12406 477 aa1.11□□□□□ -2.23
SEC8YPR055W YMR084WA2P2R3 262 aa1.1□□□□□ -2.23
SEC8YPR055W MSS18P08593 268 aa1.1□□□□□ -2.23
SEC8YPR055W MAK32P23060 363 aa1.1□□□□□ -2.23
SEC8YPR055W RFA2P26754 273 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W ZAP1P47043 880 aa1.1□□□□□ -2.23
SEC8YPR055W YJR008WP47085 338 aa1.1□□□□□ -2.23
SEC8YPR055W YGL036WP53185 909 aaPredicted RBP1.1□□□□□ -2.23
SEC8YPR055W SUL2Q12325 893 aa1.1□□□□□ -2.23
SEC8YPR055W CHO2P05374 869 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W RPL42AP0CX27 106 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W RPL42BP0CX28 106 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W COQ3P27680 312 aa1.1□□□□□ -2.23
SEC8YPR055W PRP45P28004 379 aaPredicted RBP1.1□□□□□ -2.23
SEC8YPR055W ARP2P32381 391 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W RPT3P33298 428 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W TAF5P38129 798 aa1.1□□□□□ -2.23
SEC8YPR055W YBR138CP38277 524 aa1.1□□□□□ -2.23
SEC8YPR055W APD1P38281 316 aa1.1□□□□□ -2.23
SEC8YPR055W GND1P38720 489 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W CAB2P40506 365 aa1.1□□□□□ -2.23
SEC8YPR055W ERR3P42222 437 aa1.1□□□□□ -2.23
SEC8YPR055W ATG36P46983 293 aa1.1□□□□□ -2.23
SEC8YPR055W SCW4P53334 386 aaKnown RBP1.1□□□□□ -2.23
SEC8YPR055W MPS1P54199 764 aa1.1□□□□□ -2.23
SEC8YPR055W SEC5P89102 971 aa1.1□□□□□ -2.23
SEC8YPR055W SPN1Q06505 410 aaPredicted RBP1.1□□□□□ -2.23
SEC8YPR055W IRC3Q06683 689 aa1.1□□□□□ -2.23
SEC8YPR055W PCD1Q12524 340 aa1.1□□□□□ -2.23
SEC8YPR055W SCO2P38072 301 aa1.1□□□□□ -2.23
SEC8YPR055W SSP120P39931 234 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms