RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W ECM16Q04217 1267 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W GFD1Q04839 188 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W EIS1Q05050 843 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W CRD1Q07560 283 aa5.45□□□□□ -1.54
VPS28YPL065W RPL7BQ12213 244 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W LEU2P04173 364 aaPredicted RBP5.44□□□□□ -1.54
VPS28YPL065W WHI2P12611 486 aa5.44□□□□□ -1.54
VPS28YPL065W SIR1P21691 654 aa5.44□□□□□ -1.54
VPS28YPL065W CNE1P27825 502 aa5.44□□□□□ -1.54
VPS28YPL065W CAP1P28495 268 aaKnown RBP5.44□□□□□ -1.54
VPS28YPL065W PRE2P30656 287 aaKnown RBP5.44□□□□□ -1.54
VPS28YPL065W FRD1P32614 470 aaKnown RBP5.44□□□□□ -1.54
VPS28YPL065W BEM3P32873 1128 aa5.44□□□□□ -1.54
VPS28YPL065W RPC34P32910 317 aa5.44□□□□□ -1.54
VPS28YPL065W CPR6P53691 371 aaKnown RBP5.44□□□□□ -1.54
VPS28YPL065W TGS1Q12052 315 aa5.44□□□□□ -1.54
VPS28YPL065W LOT5P34234 306 aa5.43□□□□□ -1.54
VPS28YPL065W EXO84P38261 753 aa5.43□□□□□ -1.54
VPS28YPL065W PUG1P40100 303 aa5.43□□□□□ -1.54
VPS28YPL065W SAP185P40856 1058 aa5.43□□□□□ -1.54
VPS28YPL065W IWR1Q07532 353 aaPredicted RBP5.43□□□□□ -1.54
VPS28YPL065W ICL2Q12031 575 aa5.43□□□□□ -1.54
VPS28YPL065W ADE3P07245 946 aaKnown RBP5.42□□□□□ -1.54
VPS28YPL065W RIT1P23796 513 aa5.42□□□□□ -1.54
VPS28YPL065W YUR1P26725 428 aa5.42□□□□□ -1.54
VPS28YPL065W YBR138CP38277 524 aa5.42□□□□□ -1.54
VPS28YPL065W BUD17P53727 317 aa5.42□□□□□ -1.54
VPS28YPL065W CTT1P06115 562 aa5.41□□□□□ -1.54
VPS28YPL065W NCP1P16603 691 aaKnown RBP5.41□□□□□ -1.54
VPS28YPL065W BET2P20133 325 aa5.41□□□□□ -1.54
VPS28YPL065W PRP45P28004 379 aaPredicted RBP5.41□□□□□ -1.54
VPS28YPL065W IDS2P46958 469 aa5.41□□□□□ -1.54
VPS28YPL065W ARC35P53731 342 aaKnown RBP5.41□□□□□ -1.54
VPS28YPL065W ERG13P54839 491 aaKnown RBP5.41□□□□□ -1.54
VPS28YPL065W RPS15Q01855 142 aaKnown RBP5.41□□□□□ -1.54
VPS28YPL065W USA1Q03714 838 aa5.41□□□□□ -1.54
VPS28YPL065W VPS64Q03944 604 aa5.41□□□□□ -1.54
VPS28YPL065W BLS1Q06071 122 aa5.41□□□□□ -1.54
VPS28YPL065W MIS1P09440 975 aaKnown RBP5.4□□□□□ -1.54
VPS28YPL065W CLB4P24871 460 aa5.4□□□□□ -1.54
VPS28YPL065W CAB2P40506 365 aa5.4□□□□□ -1.54
VPS28YPL065W SNO3P43544 222 aa5.4□□□□□ -1.54
VPS28YPL065W NMD5P46970 1048 aa5.4□□□□□ -1.54
VPS28YPL065W PSR2Q07949 397 aa5.4□□□□□ -1.54
VPS28YPL065W CCL1P37366 393 aa5.39□□□□□ -1.55
VPS28YPL065W ARB1P40024 610 aaKnown RBP5.39□□□□□ -1.55
VPS28YPL065W YJL043WP47053 257 aa5.39□□□□□ -1.55
VPS28YPL065W BPL1P48445 690 aaPredicted RBP5.39□□□□□ -1.55
VPS28YPL065W YPL068CQ02749 293 aa5.39□□□□□ -1.55
VPS28YPL065W YPT10P38146 199 aa5.38□□□□□ -1.55
VPS28YPL065W OPT1P40897 799 aa5.38□□□□□ -1.55
VPS28YPL065W STB2P46679 850 aa5.38□□□□□ -1.55
VPS28YPL065W ESF2P53743 316 aaKnown RBP5.38□□□□□ -1.55
VPS28YPL065W GTR1Q00582 310 aa5.38□□□□□ -1.55
VPS28YPL065W ARA2Q04212 335 aa5.38□□□□□ -1.55
VPS28YPL065W AIM6Q07716 390 aa5.38□□□□□ -1.55
VPS28YPL065W NUC1P08466 329 aa5.37□□□□□ -1.55
VPS28YPL065W YPK1P12688 680 aaKnown RBP5.37□□□□□ -1.55
VPS28YPL065W YCL049CP25577 312 aa5.37□□□□□ -1.55
VPS28YPL065W DPB3P27344 201 aa5.37□□□□□ -1.55
VPS28YPL065W ARP2P32381 391 aaKnown RBP5.37□□□□□ -1.55
VPS28YPL065W SDH8P38345 138 aa5.37□□□□□ -1.55
VPS28YPL065W YML131WQ03102 365 aa5.37□□□□□ -1.55
VPS28YPL065W TRS130Q03660 1102 aa5.37□□□□□ -1.55
VPS28YPL065W CRF1Q04930 467 aa5.37□□□□□ -1.55
VPS28YPL065W GEP3Q08622 556 aa5.37□□□□□ -1.55
VPS28YPL065W CIR2Q08822 631 aa5.37□□□□□ -1.55
VPS28YPL065W FRE7Q12333 620 aa5.37□□□□□ -1.55
VPS28YPL065W AQY1P0CD91 305 aa5.36□□□□□ -1.55
VPS28YPL065W CDC5P32562 705 aa5.36□□□□□ -1.55
VPS28YPL065W PSF2P40359 213 aa5.36□□□□□ -1.55
VPS28YPL065W SAP4P53036 818 aa5.36□□□□□ -1.55
VPS28YPL065W MRPL13Q02204 264 aa5.36□□□□□ -1.55
VPS28YPL065W BUD21Q08492 214 aaPredicted RBP5.36□□□□□ -1.55
VPS28YPL065W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
VPS28YPL065W YCR061WP25639 631 aa5.35□□□□□ -1.55
VPS28YPL065W SPC97P38863 823 aa5.35□□□□□ -1.55
VPS28YPL065W EXO1P39875 702 aa5.35□□□□□ -1.55
VPS28YPL065W SMK1P41808 388 aa5.35□□□□□ -1.55
VPS28YPL065W IMA1P53051 589 aa5.35□□□□□ -1.55
VPS28YPL065W ATG21Q02887 496 aa5.35□□□□□ -1.55
VPS28YPL065W SUL2Q12325 893 aa5.35□□□□□ -1.55
VPS28YPL065W RNR3P21672 869 aaKnown RBP5.34□□□□□ -1.55
VPS28YPL065W ECM32P32644 1121 aaKnown RBP5.34□□□□□ -1.55
VPS28YPL065W PSY4P38193 441 aa5.34□□□□□ -1.55
VPS28YPL065W IFA38P38286 347 aa5.34□□□□□ -1.55
VPS28YPL065W ARO9P38840 513 aaPredicted RBP5.34□□□□□ -1.55
VPS28YPL065W IML2P47031 731 aa5.34□□□□□ -1.55
VPS28YPL065W TAM41P53230 385 aa5.34□□□□□ -1.55
VPS28YPL065W SSM4P40318 1319 aa5.33□□□□□ -1.56
VPS28YPL065W MTF2P10849 440 aa5.33□□□□□ -1.56
VPS28YPL065W UBC1P21734 215 aaKnown RBP5.33□□□□□ -1.56
VPS28YPL065W GSY2P27472 705 aa5.33□□□□□ -1.56
VPS28YPL065W FSH1P38777 243 aaKnown RBP5.33□□□□□ -1.56
VPS28YPL065W FAF1P40546 346 aaPredicted RBP5.33□□□□□ -1.56
VPS28YPL065W MNT3P40549 630 aa5.33□□□□□ -1.56
VPS28YPL065W YFL015CP43578 164 aa5.33□□□□□ -1.56
VPS28YPL065W BNA1P47096 177 aa5.33□□□□□ -1.56
VPS28YPL065W YNL092WP53934 400 aa5.33□□□□□ -1.56
VPS28YPL065W SVL3Q03088 825 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms