RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	KCS1	Q12494	1050 aa		12.11	□□□□□ -0.47
CUE1	YMR264W	YEL077C	Q3E7X8	1277 aa		12.11	□□□□□ -0.47
CUE1	YMR264W	HIS1	P00498	297 aa	Known RBP	12.1	□□□□□ -0.47
CUE1	YMR264W	SMI1	P32566	505 aa		12.1	□□□□□ -0.47
CUE1	YMR264W	AVT3	P36062	692 aa		12.1	□□□□□ -0.47
CUE1	YMR264W	CRP1	P38845	465 aa	Known RBP	12.1	□□□□□ -0.47
CUE1	YMR264W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	12.1	□□□□□ -0.47	not detected
CUE1	YMR264W	RCF2	P53721	224 aa		12.1	□□□□□ -0.47
CUE1	YMR264W	SPP1	Q03012	353 aa		12.1	□□□□□ -0.47
CUE1	YMR264W	PMT7	Q06644	662 aa		12.1	□□□□□ -0.47
CUE1	YMR264W	NOT5	Q12514	560 aa	Predicted RBP	12.1	□□□□□ -0.47
CUE1	YMR264W	VAN1	P23642	535 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	VPH1	P32563	840 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	SSE1	P32589	693 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	YSC84	P32793	468 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	MRS6	P32864	603 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	RDH54	P38086	958 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	SIF2	P38262	535 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	EDC3	P39998	551 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	RNR4	P49723	345 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	UBP2	Q01476	1272 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	YMR209C	Q03648	457 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	ENT5	Q03769	411 aa	Known RBP	12.09	□□□□□ -0.47
CUE1	YMR264W	TAF11	Q04226	346 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	GTB1	Q04924	702 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	CDC123	Q05791	360 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	OSW1	Q08692	278 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	RGS2	Q99188	309 aa		12.09	□□□□□ -0.47
CUE1	YMR264W	APE1	P14904	514 aa		12.08	□□□□□ -0.48
CUE1	YMR264W	PWP1	P21304	576 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	SEC14	P24280	304 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	HRR25	P29295	494 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	RIM1	P32445	135 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	POA1	P38218	177 aa		12.08	□□□□□ -0.48
CUE1	YMR264W	PHO89	P38361	574 aa		12.08	□□□□□ -0.48
CUE1	YMR264W	CCT8	P47079	568 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	TFB2	Q02939	513 aa		12.08	□□□□□ -0.48
CUE1	YMR264W	RLI1	Q03195	608 aa	Known RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	YML083C	Q04526	418 aa		12.08	□□□□□ -0.48
CUE1	YMR264W	ECM22	Q05958	814 aa	Predicted RBP	12.08	□□□□□ -0.48
CUE1	YMR264W	ATP1	P07251	545 aa	Known RBP	12.07	□□□□□ -0.48
CUE1	YMR264W	INO1	P11986	533 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	MSD1	P15179	658 aa	Known RBP	12.07	□□□□□ -0.48
CUE1	YMR264W	SNT1	P25357	1226 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	MLS1	P30952	554 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	RRN3	P36070	627 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	RIM2	P38127	377 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	FZO1	P38297	855 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	SRP68	P38687	599 aa	Known RBP	12.07	□□□□□ -0.48
CUE1	YMR264W	YDR089W	P38966	869 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	ROK1	P45818	564 aa	Predicted RBP	12.07	□□□□□ -0.48
CUE1	YMR264W	ILM1	P47155	203 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	COP1	P53622	1201 aa	Known RBP	12.07	□□□□□ -0.48
CUE1	YMR264W	RSC2	Q06488	889 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	SWC7	Q06707	132 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	SLD7	Q08457	257 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	GNT1	Q12096	491 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	SVS1	Q12254	260 aa		12.07	□□□□□ -0.48
CUE1	YMR264W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	12.06	□□□□□ -0.48	not detected
CUE1	YMR264W	EXO70	P19658	623 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	NPP1	P25353	742 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	PHA2	P32452	334 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	PEP7	P32609	515 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	SEC6	P32844	805 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	SRP101	P32916	621 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	OPT1	P40897	799 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	CHS6	P40955	746 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	UBP6	P43593	499 aa	Known RBP	12.06	□□□□□ -0.48
CUE1	YMR264W	ARC1	P46672	376 aa	Known RBP	12.06	□□□□□ -0.48
CUE1	YMR264W	SNG1	P46950	547 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	MAD3	P47074	515 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	VPS25	P47142	202 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	YNL058C	P53947	316 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	CEG1	Q01159	459 aa	Predicted RBP	12.06	□□□□□ -0.48
CUE1	YMR264W	MET14	Q02196	202 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	RNY1	Q02933	434 aa	Known RBP	12.06	□□□□□ -0.48
CUE1	YMR264W	FMN1	Q03778	218 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	INP2	Q03824	705 aa		12.06	□□□□□ -0.48
CUE1	YMR264W	YLR422W	Q06409	1932 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	ENO2	P00925	437 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	PAT1	P25644	796 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	PSE1	P32337	1089 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	DAL1	P32375	460 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	GDA1	P32621	518 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	GRS1	P38088	690 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	FUI1	P38196	639 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	URA8	P38627	578 aa	Predicted RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	STN1	P38960	494 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	RTT101	P47050	842 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	FOL2	P51601	243 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	MRM2	P53123	320 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	IST1	P53843	298 aa	Predicted RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	SIW14	P53965	281 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	LGE1	Q02796	332 aa	Known RBP	12.05	□□□□□ -0.48
CUE1	YMR264W	TVP15	Q03860	143 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	NHX1	Q04121	633 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	YMR030W-A	Q3E760	96 aa		12.05	□□□□□ -0.48
CUE1	YMR264W	ERG20	P08524	352 aa	Known RBP	12.04	□□□□□ -0.48
CUE1	YMR264W	SDH2	P21801	266 aa		12.04	□□□□□ -0.48
CUE1	YMR264W	AMD2	P22580	549 aa		12.04	□□□□□ -0.48

Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms