RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W ASK1P35734 292 aa3.23□□□□□ -1.89
CTK3YML112W FTH1P38310 465 aa3.23□□□□□ -1.89
CTK3YML112W SAP1P39955 897 aaKnown RBP3.23□□□□□ -1.89
CTK3YML112W SCS2P40075 244 aaKnown RBP3.23□□□□□ -1.89
CTK3YML112W RAD26P40352 1085 aa3.23□□□□□ -1.89
CTK3YML112W CFD1P40558 293 aa3.23□□□□□ -1.89
CTK3YML112W CIN1P40987 1014 aa3.23□□□□□ -1.89
CTK3YML112W IRC8P47046 822 aa3.23□□□□□ -1.89
CTK3YML112W PEX14P53112 341 aa3.23□□□□□ -1.89
CTK3YML112W COP1P53622 1201 aaKnown RBP3.23□□□□□ -1.89
CTK3YML112W ACS1Q01574 713 aa3.23□□□□□ -1.89
CTK3YML112W SNU56Q03782 492 aaKnown RBP3.23□□□□□ -1.89
CTK3YML112W PLM2Q04383 521 aa3.23□□□□□ -1.89
CTK3YML112W YML053CQ04978 212 aa3.23□□□□□ -1.89
CTK3YML112W ENT2Q05785 613 aa3.23□□□□□ -1.89
CTK3YML112W YDL242WQ07746 117 aa3.23□□□□□ -1.89
CTK3YML112W YOR389WQ08912 624 aa3.23□□□□□ -1.89
CTK3YML112W PSF3Q12146 194 aa3.23□□□□□ -1.89
CTK3YML112W LCB4Q12246 624 aa3.23□□□□□ -1.89
CTK3YML112W CTT1P06115 562 aa3.22□□□□□ -1.89
CTK3YML112W VAS1P07806 1104 aaKnown RBP3.22□□□□□ -1.89
CTK3YML112W YER190C-BP0CX94 160 aa3.22□□□□□ -1.89
CTK3YML112W YEL077W-AP0CX95 160 aa3.22□□□□□ -1.89
CTK3YML112W YGR296C-BP0CX96 160 aa3.22□□□□□ -1.89
CTK3YML112W YPL283W-BP0CX97 160 aa3.22□□□□□ -1.89
CTK3YML112W YPR204C-AP0CX98 160 aa3.22□□□□□ -1.89
CTK3YML112W PHO3P24031 467 aa3.22□□□□□ -1.89
CTK3YML112W YCR061WP25639 631 aa3.22□□□□□ -1.89
CTK3YML112W YUR1P26725 428 aa3.22□□□□□ -1.89
CTK3YML112W KES1P35844 434 aaKnown RBP3.22□□□□□ -1.89
CTK3YML112W PAF1P38351 445 aa3.22□□□□□ -1.89
CTK3YML112W ARO9P38840 513 aaPredicted RBP3.22□□□□□ -1.89
CTK3YML112W MRPL1Q04599 285 aa3.22□□□□□ -1.89
CTK3YML112W HER1Q12276 1246 aa3.22□□□□□ -1.89
CTK3YML112W YER175W-AQ8TGU4 54 aa3.22□□□□□ -1.89
CTK3YML112W ILS1P09436 1072 aaKnown RBP3.21□□□□□ -1.9
CTK3YML112W KGD2P19262 463 aaPredicted RBP3.21□□□□□ -1.9
CTK3YML112W COQ3P27680 312 aa3.21□□□□□ -1.9
CTK3YML112W MGM1P32266 881 aa3.21□□□□□ -1.9
CTK3YML112W SDS22P36047 338 aa3.21□□□□□ -1.9
CTK3YML112W TAF5P38129 798 aa3.21□□□□□ -1.9
CTK3YML112W FLO5P38894 1075 aa3.21□□□□□ -1.9
CTK3YML112W POL31P46957 487 aa3.21□□□□□ -1.9
CTK3YML112W PUS4P48567 403 aaKnown RBP3.21□□□□□ -1.9
CTK3YML112W FOL1P53848 824 aa3.21□□□□□ -1.9
CTK3YML112W AAT1Q01802 451 aa3.21□□□□□ -1.9
CTK3YML112W TRS31Q03337 283 aa3.21□□□□□ -1.9
CTK3YML112W TDA9Q04545 1251 aa3.21□□□□□ -1.9
CTK3YML112W NUR1Q12066 484 aa3.21□□□□□ -1.9
CTK3YML112W ADH4P10127 382 aa3.2□□□□□ -1.9
CTK3YML112W PXL1P36166 706 aa3.2□□□□□ -1.9
CTK3YML112W YMR124WP39523 943 aaKnown RBP3.2□□□□□ -1.9
CTK3YML112W SAW1P39735 261 aa3.2□□□□□ -1.9
CTK3YML112W ARB1P40024 610 aaKnown RBP3.2□□□□□ -1.9
CTK3YML112W NOP2P40991 618 aaKnown RBP3.2□□□□□ -1.9
CTK3YML112W STB2P46679 850 aa3.2□□□□□ -1.9
CTK3YML112W CRF1Q04930 467 aa3.2□□□□□ -1.9
CTK3YML112W RAD34Q06665 692 aa3.2□□□□□ -1.9
CTK3YML112W LYS21Q12122 440 aaKnown RBP3.2□□□□□ -1.9
CTK3YML112W MRC1P25588 1096 aa3.19□□□□□ -1.9
CTK3YML112W RPS7AP26786 190 aaKnown RBP3.19□□□□□ -1.9
CTK3YML112W VBA2P38358 474 aaKnown RBP3.19□□□□□ -1.9
CTK3YML112W MEP2P41948 499 aa3.19□□□□□ -1.9
CTK3YML112W CNM67P53865 581 aaKnown RBP3.19□□□□□ -1.9
CTK3YML112W YNL034WP53963 612 aa3.19□□□□□ -1.9
CTK3YML112W YAT1P80235 687 aa3.19□□□□□ -1.9
CTK3YML112W CRD1Q07560 283 aa3.19□□□□□ -1.9
CTK3YML112W SES1P07284 462 aaKnown RBP3.18□□□□□ -1.9
CTK3YML112W RPT3P33298 428 aaKnown RBP3.18□□□□□ -1.9
CTK3YML112W RPF2P36160 344 aaKnown RBP3.18□□□□□ -1.9
CTK3YML112W YLF2P38746 405 aa3.18□□□□□ -1.9
CTK3YML112W ASK10P48361 1146 aa3.18□□□□□ -1.9
CTK3YML112W RPL15BP54780 204 aaPredicted RBP3.18□□□□□ -1.9
CTK3YML112W VPS64Q03944 604 aa3.18□□□□□ -1.9
CTK3YML112W AAD4Q07747 329 aa3.18□□□□□ -1.9
CTK3YML112W YPL191CQ08930 360 aa3.18□□□□□ -1.9
CTK3YML112W YPT1P01123 206 aaKnown RBP3.17□□□□□ -1.9
CTK3YML112W GAL4P04386 881 aa3.17□□□□□ -1.9
CTK3YML112W SWD1P39706 426 aa3.17□□□□□ -1.9
CTK3YML112W ERV46P39727 415 aa3.17□□□□□ -1.9
CTK3YML112W IMA5P40884 581 aa3.17□□□□□ -1.9
CTK3YML112W LSC1P53598 329 aaKnown RBP3.17□□□□□ -1.9
CTK3YML112W ARA2Q04212 335 aa3.17□□□□□ -1.9
CTK3YML112W AIM6Q07716 390 aa3.17□□□□□ -1.9
CTK3YML112W ATX2Q12067 313 aa3.17□□□□□ -1.9
CTK3YML112W ILV2P07342 687 aaKnown RBP3.16□□□□□ -1.9
CTK3YML112W SEC18P18759 758 aaKnown RBP3.16□□□□□ -1.9
CTK3YML112W AIM17P23180 465 aaKnown RBP3.16□□□□□ -1.9
CTK3YML112W YCP4P25349 247 aaKnown RBP3.16□□□□□ -1.9
CTK3YML112W PTC6P25646 442 aa3.16□□□□□ -1.9
CTK3YML112W SIP1P32578 815 aa3.16□□□□□ -1.9
CTK3YML112W PFA4Q12006 378 aa3.16□□□□□ -1.9
CTK3YML112W GET3Q12154 354 aaKnown RBP3.16□□□□□ -1.9
CTK3YML112W SSB1P11484 613 aaKnown RBP3.15□□□□□ -1.91
CTK3YML112W SWC3P31376 625 aa3.15□□□□□ -1.91
CTK3YML112W GSH1P32477 678 aa3.15□□□□□ -1.91
CTK3YML112W SSB2P40150 613 aaKnown RBP3.15□□□□□ -1.91
CTK3YML112W YJL107CP42947 387 aa3.15□□□□□ -1.91
CTK3YML112W MDV1P47025 714 aa3.15□□□□□ -1.91
CTK3YML112W LYS20P48570 428 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms