RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C OAF3P36023 863 aa3.8□□□□□ -1.8
RPN13YLR421C ERP2P39704 215 aa3.8□□□□□ -1.8
RPN13YLR421C YDL183CP48569 320 aa3.8□□□□□ -1.8
RPN13YLR421C SPC105P53148 917 aa3.8□□□□□ -1.8
RPN13YLR421C YTM1Q12024 460 aaPredicted RBP3.8□□□□□ -1.8
RPN13YLR421C MPD2Q99316 277 aa3.8□□□□□ -1.8
RPN13YLR421C GCN2P15442 1659 aa3.8□□□□□ -1.8
RPN13YLR421C DNF1P32660 1571 aa3.8□□□□□ -1.8
RPN13YLR421C RPO31P04051 1460 aa3.79□□□□□ -1.8
RPN13YLR421C VPS15P22219 1454 aa3.79□□□□□ -1.8
RPN13YLR421C GAL1P04385 528 aa3.79□□□□□ -1.8
RPN13YLR421C RPS21AP0C0V8 87 aaKnown RBP3.79□□□□□ -1.8
RPN13YLR421C YMR085WP0CF18 432 aa3.79□□□□□ -1.8
RPN13YLR421C CDC26P14724 124 aa3.79□□□□□ -1.8
RPN13YLR421C PTP2P29461 750 aa3.79□□□□□ -1.8
RPN13YLR421C SPC97P38863 823 aa3.79□□□□□ -1.8
RPN13YLR421C OAF1P39720 1047 aaPredicted RBP3.79□□□□□ -1.8
RPN13YLR421C GPP2P40106 250 aaKnown RBP3.79□□□□□ -1.8
RPN13YLR421C VPS27P40343 622 aaKnown RBP3.79□□□□□ -1.8
RPN13YLR421C TDA10P42938 290 aa3.79□□□□□ -1.8
RPN13YLR421C GZF3P42944 551 aaKnown RBP3.79□□□□□ -1.8
RPN13YLR421C USA1Q03714 838 aa3.79□□□□□ -1.8
RPN13YLR421C COG4Q06096 861 aa3.79□□□□□ -1.8
RPN13YLR421C PSR2Q07949 397 aa3.79□□□□□ -1.8
RPN13YLR421C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
RPN13YLR421C NYV1Q12255 253 aa3.79□□□□□ -1.8
RPN13YLR421C HMG2P12684 1045 aa3.78□□□□□ -1.8
RPN13YLR421C AEP2P22136 580 aa3.78□□□□□ -1.8
RPN13YLR421C PXL1P36166 706 aa3.78□□□□□ -1.8
RPN13YLR421C SAE2P46946 345 aa3.78□□□□□ -1.8
RPN13YLR421C MNN11P46985 422 aaKnown RBP3.78□□□□□ -1.8
RPN13YLR421C PAP2P53632 584 aaKnown RBP3.78□□□□□ -1.8
RPN13YLR421C TPO3Q06451 622 aa3.78□□□□□ -1.8
RPN13YLR421C HFI1Q12060 488 aa3.78□□□□□ -1.8
RPN13YLR421C HER1Q12276 1246 aa3.78□□□□□ -1.8
RPN13YLR421C PDR5P33302 1511 aaKnown RBP3.78□□□□□ -1.8
RPN13YLR421C QCR6P00127 147 aa3.77□□□□□ -1.81
RPN13YLR421C HSC82P15108 705 aaKnown RBP3.77□□□□□ -1.81
RPN13YLR421C ROX1P25042 368 aa3.77□□□□□ -1.81
RPN13YLR421C HEM12P32347 362 aaPredicted RBP3.77□□□□□ -1.81
RPN13YLR421C MF(ALPHA)2P32435 120 aa3.77□□□□□ -1.81
RPN13YLR421C TFC4P33339 1025 aa3.77□□□□□ -1.81
RPN13YLR421C MFT1P33441 392 aaKnown RBP3.77□□□□□ -1.81
RPN13YLR421C YIR014WP40570 242 aa3.77□□□□□ -1.81
RPN13YLR421C YPL071CQ02864 156 aa3.77□□□□□ -1.81
RPN13YLR421C SPN1Q06505 410 aaPredicted RBP3.77□□□□□ -1.81
RPN13YLR421C MLC2Q06580 163 aa3.77□□□□□ -1.81
RPN13YLR421C RRI2Q12348 645 aa3.77□□□□□ -1.81
RPN13YLR421C TY1B-DR3Q99231 1755 aa3.76□□□□□ -1.81
RPN13YLR421C YPR089WO13585 888 aa3.76□□□□□ -1.81
RPN13YLR421C YPK1P12688 680 aaKnown RBP3.76□□□□□ -1.81
RPN13YLR421C YEF3P16521 1044 aaKnown RBP3.76□□□□□ -1.81
RPN13YLR421C ACO1P19414 778 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
RPN13YLR421C NIC96P34077 839 aa3.76□□□□□ -1.81
RPN13YLR421C PTH2P34222 208 aa3.76□□□□□ -1.81
RPN13YLR421C YJL193WP39542 402 aa3.76□□□□□ -1.81
RPN13YLR421C FUN12P39730 1002 aaKnown RBP3.76□□□□□ -1.81
RPN13YLR421C PTA1Q01329 785 aaPredicted RBP3.76□□□□□ -1.81
RPN13YLR421C GIR2Q03768 265 aaPredicted RBP3.76□□□□□ -1.81
RPN13YLR421C AHA1Q12449 350 aaKnown RBP3.76□□□□□ -1.81
RPN13YLR421C APM4Q99186 491 aa3.76□□□□□ -1.81
RPN13YLR421C YBT1P32386 1661 aa3.75□□□□□ -1.81
RPN13YLR421C VPS33P20795 691 aa3.75□□□□□ -1.81
RPN13YLR421C YJU2P28320 278 aaPredicted RBP3.75□□□□□ -1.81
RPN13YLR421C RMA1P36001 430 aaKnown RBP3.75□□□□□ -1.81
RPN13YLR421C YKL133CP36066 463 aa3.75□□□□□ -1.81
RPN13YLR421C DID4P36108 232 aa3.75□□□□□ -1.81
RPN13YLR421C YHL041WP38730 149 aa3.75□□□□□ -1.81
RPN13YLR421C NOC2P39744 710 aaKnown RBP3.75□□□□□ -1.81
RPN13YLR421C EMP65P40085 556 aa3.75□□□□□ -1.81
RPN13YLR421C YIL092WP40497 633 aa3.75□□□□□ -1.81
RPN13YLR421C YIL024CP40543 189 aa3.75□□□□□ -1.81
RPN13YLR421C ESF2P53743 316 aaKnown RBP3.75□□□□□ -1.81
RPN13YLR421C MDG1P53885 366 aa3.75□□□□□ -1.81
RPN13YLR421C HRD3Q05787 833 aa3.75□□□□□ -1.81
RPN13YLR421C PCK1P10963 549 aa3.74□□□□□ -1.81
RPN13YLR421C DGR2P32330 852 aa3.74□□□□□ -1.81
RPN13YLR421C RPN12P32496 274 aa3.74□□□□□ -1.81
RPN13YLR421C EXO84P38261 753 aa3.74□□□□□ -1.81
RPN13YLR421C ACA1P39970 489 aa3.74□□□□□ -1.81
RPN13YLR421C VID27P40157 782 aa3.74□□□□□ -1.81
RPN13YLR421C LSC1P53598 329 aaKnown RBP3.74□□□□□ -1.81
RPN13YLR421C ENT2Q05785 613 aa3.74□□□□□ -1.81
RPN13YLR421C EDE1P34216 1381 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-LR1P0C2J3 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-FP0CX63 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-GR2P0CX64 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-CP25384 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-DR2Q03494 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY1B-DR1Q03855 1755 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-DR3Q07791 1770 aaKnown RBP3.74□□□□□ -1.81
RPN13YLR421C TY2B-OR1Q12113 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-DR1Q12472 1770 aa3.74□□□□□ -1.81
RPN13YLR421C TY2B-OR2Q12501 1770 aa3.74□□□□□ -1.81
RPN13YLR421C GEA2P39993 1459 aaKnown RBP3.73□□□□□ -1.81
RPN13YLR421C BI2P03873 423 aa3.73□□□□□ -1.81
RPN13YLR421C AAC1P04710 309 aa3.73□□□□□ -1.81
RPN13YLR421C MSS18P08593 268 aa3.73□□□□□ -1.81
RPN13YLR421C SSH4P32343 579 aa3.73□□□□□ -1.81
RPN13YLR421C HXT4P32467 576 aa3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms