RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W HSM3P38348 480 aa3.77□□□□□ -1.81
LCB5YLR260W OTU2P38747 307 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W YHR131CP38835 850 aa3.77□□□□□ -1.81
LCB5YLR260W HXT6P39003 570 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W HXT7P39004 570 aa3.77□□□□□ -1.81
LCB5YLR260W KHA1P40309 873 aa3.77□□□□□ -1.81
LCB5YLR260W SEC28P40509 296 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W YJR124CP47159 448 aa3.77□□□□□ -1.81
LCB5YLR260W ENT3P47160 408 aa3.77□□□□□ -1.81
LCB5YLR260W TCB2P48231 1178 aa3.77□□□□□ -1.81
LCB5YLR260W RAD17P48581 401 aa3.77□□□□□ -1.81
LCB5YLR260W AZR1P50080 613 aa3.77□□□□□ -1.81
LCB5YLR260W PSP2P50109 593 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W CPR6P53691 371 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W YNR065CP53751 1116 aa3.77□□□□□ -1.81
LCB5YLR260W CBK1P53894 756 aa3.77□□□□□ -1.81
LCB5YLR260W VPS9P54787 451 aa3.77□□□□□ -1.81
LCB5YLR260W NOG1Q02892 647 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W DPB4Q04603 196 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W PHO92Q06390 306 aa3.77□□□□□ -1.81
LCB5YLR260W RSC3Q06639 885 aa3.77□□□□□ -1.81
LCB5YLR260W HAL9Q12180 1030 aa3.77□□□□□ -1.81
LCB5YLR260W ATG11Q12527 1178 aa3.77□□□□□ -1.81
LCB5YLR260W NUM1Q00402 2748 aa3.77□□□□□ -1.81
LCB5YLR260W HCA4P20448 770 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W MIH1P23748 554 aa3.77□□□□□ -1.81
LCB5YLR260W RRP7P25368 297 aaPredicted RBP3.77□□□□□ -1.81
LCB5YLR260W GPI10P30777 616 aa3.77□□□□□ -1.81
LCB5YLR260W ATG19P35193 415 aa3.77□□□□□ -1.81
LCB5YLR260W TDA3P38758 523 aa3.77□□□□□ -1.81
LCB5YLR260W LAM1P38851 1228 aa3.77□□□□□ -1.81
LCB5YLR260W SIP5P40210 489 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W GYP8P43570 497 aa3.77□□□□□ -1.81
LCB5YLR260W FOL2P51601 243 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W ERV25P54837 211 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W MSC2Q03455 724 aa3.77□□□□□ -1.81
LCB5YLR260W COG8Q04632 607 aa3.77□□□□□ -1.81
LCB5YLR260W DBP9Q06218 594 aaKnown RBP3.77□□□□□ -1.81
LCB5YLR260W VHS3Q08438 674 aa3.77□□□□□ -1.81
LCB5YLR260W GUP2Q08929 609 aa3.77□□□□□ -1.81
LCB5YLR260W NUR1Q12066 484 aa3.77□□□□□ -1.81
LCB5YLR260W FRE6Q12473 712 aa3.77□□□□□ -1.81
LCB5YLR260W CPA2P03965 1118 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W DED1P06634 604 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W CDC6P09119 513 aa3.76□□□□□ -1.81
LCB5YLR260W HEM1P09950 548 aaPredicted RBP3.76□□□□□ -1.81
LCB5YLR260W MTF2P10849 440 aa3.76□□□□□ -1.81
LCB5YLR260W NCP1P16603 691 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W ROX1P25042 368 aa3.76□□□□□ -1.81
LCB5YLR260W GPT2P36148 743 aa3.76□□□□□ -1.81
LCB5YLR260W PPE1P38796 400 aa3.76□□□□□ -1.81
LCB5YLR260W RPN10P38886 268 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W GDI1P39958 451 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W YER010CP40011 234 aa3.76□□□□□ -1.81
LCB5YLR260W FMP10P40098 244 aa3.76□□□□□ -1.81
LCB5YLR260W LCB2P40970 561 aa3.76□□□□□ -1.81
LCB5YLR260W LSB6P42951 607 aa3.76□□□□□ -1.81
LCB5YLR260W YGL138CP53122 345 aa3.76□□□□□ -1.81
LCB5YLR260W MRPL13Q02204 264 aa3.76□□□□□ -1.81
LCB5YLR260W AIM33Q04516 312 aa3.76□□□□□ -1.81
LCB5YLR260W SMD2Q06217 110 aaKnown RBP3.76□□□□□ -1.81
LCB5YLR260W MLH2Q07980 695 aa3.76□□□□□ -1.81
LCB5YLR260W DCS2Q12123 353 aa3.76□□□□□ -1.81
LCB5YLR260W KCS1Q12494 1050 aa3.76□□□□□ -1.81
LCB5YLR260W MER1P16523 270 aa3.75□□□□□ -1.81
LCB5YLR260W MRPL25P23369 157 aa3.75□□□□□ -1.81
LCB5YLR260W NAR1P23503 491 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W SED4P25365 1065 aa3.75□□□□□ -1.81
LCB5YLR260W YCL049CP25577 312 aa3.75□□□□□ -1.81
LCB5YLR260W SYP1P25623 870 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W SPC110P32380 944 aa3.75□□□□□ -1.81
LCB5YLR260W NGG1P32494 702 aa3.75□□□□□ -1.81
LCB5YLR260W SMI1P32566 505 aa3.75□□□□□ -1.81
LCB5YLR260W APM3P38153 483 aa3.75□□□□□ -1.81
LCB5YLR260W GAA1P39012 614 aa3.75□□□□□ -1.81
LCB5YLR260W YIL161WP40449 235 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W LAM5P43560 674 aa3.75□□□□□ -1.81
LCB5YLR260W GUS1P46655 708 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
LCB5YLR260W DIP5P53388 608 aa3.75□□□□□ -1.81
LCB5YLR260W CIK1Q01649 594 aa3.75□□□□□ -1.81
LCB5YLR260W YLR407WQ06070 228 aa3.75□□□□□ -1.81
LCB5YLR260W OMS1Q06668 471 aa3.75□□□□□ -1.81
LCB5YLR260W APL4Q12028 832 aa3.75□□□□□ -1.81
LCB5YLR260W YLL058WQ12198 575 aa3.75□□□□□ -1.81
LCB5YLR260W YLL054CQ12244 843 aa3.75□□□□□ -1.81
LCB5YLR260W SFI1Q12369 946 aa3.75□□□□□ -1.81
LCB5YLR260W ARG3P05150 338 aa3.75□□□□□ -1.81
LCB5YLR260W FUM1P08417 488 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W MIS1P09440 975 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W MATALPHA2P0CY08 210 aa3.75□□□□□ -1.81
LCB5YLR260W HMLALPHA2P0CY09 210 aa3.75□□□□□ -1.81
LCB5YLR260W OM45P16547 393 aa3.75□□□□□ -1.81
LCB5YLR260W OLE1P21147 510 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W ATP12P22135 325 aa3.75□□□□□ -1.81
LCB5YLR260W STE50P25344 346 aa3.75□□□□□ -1.81
LCB5YLR260W SGF29P25554 259 aa3.75□□□□□ -1.81
LCB5YLR260W ARC19P33204 171 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W LAS1P36146 502 aaPredicted RBP3.75□□□□□ -1.81
LCB5YLR260W TIF5P38431 405 aaKnown RBP3.75□□□□□ -1.81
LCB5YLR260W GND1P38720 489 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms