RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C COX5AP00424 153 aa10.67□□□□□ -0.7
SHM2YLR058C ERR1P0CX10 437 aa10.67□□□□□ -0.7
SHM2YLR058C ERR2P0CX11 437 aa10.67□□□□□ -0.7
SHM2YLR058C RAM1P22007 431 aa10.67□□□□□ -0.7
SHM2YLR058C PAT1P25644 796 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C SRP68P38687 599 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C ERR3P42222 437 aa10.67□□□□□ -0.7
SHM2YLR058C ROK1P45818 564 aaPredicted RBP10.67□□□□□ -0.7
SHM2YLR058C URB2P47108 1174 aa10.67□□□□□ -0.7
SHM2YLR058C ASN2P49090 572 aaKnown RBP10.67□□□□□ -0.7
SHM2YLR058C SEG1Q04279 960 aa10.67□□□□□ -0.7
SHM2YLR058C SFH1Q06168 426 aa10.67□□□□□ -0.7
SHM2YLR058C MPC54Q08550 464 aa10.67□□□□□ -0.7
SHM2YLR058C OCA6Q12454 224 aa10.67□□□□□ -0.7
SHM2YLR058C SIR1P21691 654 aa10.66□□□□□ -0.7
SHM2YLR058C GID7P25569 745 aa10.66□□□□□ -0.7
SHM2YLR058C KAR4P25583 335 aa10.66□□□□□ -0.7
SHM2YLR058C ADD66P36040 267 aa10.66□□□□□ -0.7
SHM2YLR058C SMF2P38778 549 aa10.66□□□□□ -0.7
SHM2YLR058C ZIP2P53061 704 aa10.66□□□□□ -0.7
SHM2YLR058C YPL014WQ02606 381 aa10.66□□□□□ -0.7
SHM2YLR058C SLU7Q02775 382 aaKnown RBP10.66□□□□□ -0.7
SHM2YLR058C USA1Q03714 838 aa10.66□□□□□ -0.7
SHM2YLR058C MSH6Q03834 1242 aa10.66□□□□□ -0.7
SHM2YLR058C TEF1P02994 458 aaKnown RBP10.65□□□□□ -0.7
SHM2YLR058C ILS1P09436 1072 aaKnown RBP10.65□□□□□ -0.7
SHM2YLR058C ILV6P25605 309 aaKnown RBP10.65□□□□□ -0.7
SHM2YLR058C PTC3P34221 468 aaKnown RBP10.65□□□□□ -0.7
SHM2YLR058C COY1P34237 679 aa10.65□□□□□ -0.7
SHM2YLR058C YHR131CP38835 850 aa10.65□□□□□ -0.7
SHM2YLR058C UBP7P40453 1071 aa10.65□□□□□ -0.7
SHM2YLR058C RRN7P40992 514 aa10.65□□□□□ -0.7
SHM2YLR058C GND2P53319 492 aa10.65□□□□□ -0.7
SHM2YLR058C TUB4P53378 473 aa10.65□□□□□ -0.7
SHM2YLR058C YNR063WP53749 607 aa10.65□□□□□ -0.7
SHM2YLR058C YMR206WQ03695 313 aa10.65□□□□□ -0.7
SHM2YLR058C TMN2Q04562 672 aa10.65□□□□□ -0.7
SHM2YLR058C ADE13Q05911 482 aaKnown RBP10.65□□□□□ -0.7
SHM2YLR058C NDD1Q08887 554 aa10.65□□□□□ -0.7
SHM2YLR058C HOS1Q12214 470 aa10.65□□□□□ -0.7
SHM2YLR058C KAR9P32526 644 aa10.64□□□□□ -0.71
SHM2YLR058C POL12P38121 705 aaPredicted RBP10.64□□□□□ -0.71
SHM2YLR058C ELO3P40319 345 aa10.64□□□□□ -0.71
SHM2YLR058C TIM13P53299 105 aa10.64□□□□□ -0.71
SHM2YLR058C CUE5Q08412 411 aaKnown RBP10.64□□□□□ -0.71
SHM2YLR058C PGC1Q08959 321 aa10.64□□□□□ -0.71
SHM2YLR058C RUD3Q12234 484 aaKnown RBP10.64□□□□□ -0.71
SHM2YLR058C REV1P12689 985 aa10.63□□□□□ -0.71
SHM2YLR058C MRPL25P23369 157 aa10.63□□□□□ -0.71
SHM2YLR058C SRP101P32916 621 aa10.63□□□□□ -0.71
SHM2YLR058C DPH1P40487 425 aaKnown RBP10.63□□□□□ -0.71
SHM2YLR058C YFL012WP43580 148 aa10.63□□□□□ -0.71
SHM2YLR058C CTK3P46963 296 aaPredicted RBP10.63□□□□□ -0.71
SHM2YLR058C MET14Q02196 202 aa10.63□□□□□ -0.71
SHM2YLR058C RNT1Q02555 471 aa10.63□□□□□ -0.71
SHM2YLR058C RLI1Q03195 608 aaKnown RBP10.63□□□□□ -0.71
SHM2YLR058C PEX15Q08215 383 aa10.63□□□□□ -0.71
SHM2YLR058C YOR223WQ12015 292 aa10.63□□□□□ -0.71
SHM2YLR058C DAP1Q12091 152 aa10.63□□□□□ -0.71
SHM2YLR058C LDB17Q12342 491 aa10.63□□□□□ -0.71
SHM2YLR058C PDH1Q12428 516 aaKnown RBP10.63□□□□□ -0.71
SHM2YLR058C ARF2P19146 181 aaKnown RBP10.62□□□□□ -0.71
SHM2YLR058C HEM12P32347 362 aaPredicted RBP10.62□□□□□ -0.71
SHM2YLR058C MRPL40P36534 297 aa10.62□□□□□ -0.71
SHM2YLR058C HEM14P40012 539 aa10.62□□□□□ -0.71
SHM2YLR058C AMA1P50082 593 aa10.62□□□□□ -0.71
SHM2YLR058C SIW14P53965 281 aa10.62□□□□□ -0.71
SHM2YLR058C KTR5P53966 522 aaPredicted RBP10.62□□□□□ -0.71
SHM2YLR058C ENO1P00924 437 aaKnown RBP10.61□□□□□ -0.71
SHM2YLR058C ILV2P07342 687 aaKnown RBP10.61□□□□□ -0.71
SHM2YLR058C KEX2P13134 814 aa10.61□□□□□ -0.71
SHM2YLR058C BET2P20133 325 aa10.61□□□□□ -0.71
SHM2YLR058C AAT2P23542 418 aaKnown RBP10.61□□□□□ -0.71
SHM2YLR058C URA10P30402 227 aa10.61□□□□□ -0.71
SHM2YLR058C NDI1P32340 513 aa10.61□□□□□ -0.71
SHM2YLR058C OAF3P36023 863 aa10.61□□□□□ -0.71
SHM2YLR058C RDH54P38086 958 aa10.61□□□□□ -0.71
SHM2YLR058C APM3P38153 483 aa10.61□□□□□ -0.71
SHM2YLR058C CCH1P50077 2039 aa10.61□□□□□ -0.71
SHM2YLR058C YCL068CP25593 260 aa10.6□□□□□ -0.71
SHM2YLR058C SMI1P32566 505 aa10.6□□□□□ -0.71
SHM2YLR058C YKL097CP34245 136 aa10.6□□□□□ -0.71
SHM2YLR058C PEX5P35056 612 aa10.6□□□□□ -0.71
SHM2YLR058C YKR023WP36119 530 aaKnown RBP10.6□□□□□ -0.71
SHM2YLR058C TGL4P36165 910 aa10.6□□□□□ -0.71
SHM2YLR058C YHL041WP38730 149 aa10.6□□□□□ -0.71
SHM2YLR058C EXO1P39875 702 aa10.6□□□□□ -0.71
SHM2YLR058C STR3P53101 465 aaKnown RBP10.6□□□□□ -0.71
SHM2YLR058C TEP1P53916 434 aa10.6□□□□□ -0.71
SHM2YLR058C SLD7Q08457 257 aa10.6□□□□□ -0.71
SHM2YLR058C ACO1P19414 778 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
SHM2YLR058C KIN3P22209 435 aa10.59□□□□□ -0.71
SHM2YLR058C MRPL8P22353 238 aa10.59□□□□□ -0.71
SHM2YLR058C MIH1P23748 554 aa10.59□□□□□ -0.71
SHM2YLR058C IMG2P25642 146 aaPredicted RBP10.59□□□□□ -0.71
SHM2YLR058C PPZ1P26570 692 aa10.59□□□□□ -0.71
SHM2YLR058C SWE1P32944 819 aa10.59□□□□□ -0.71
SHM2YLR058C MED6P38782 295 aa10.59□□□□□ -0.71
SHM2YLR058C IST3P40565 148 aaPredicted RBP10.59□□□□□ -0.71
SHM2YLR058C ERG10P41338 398 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 87.5 ms