RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W YJR008WP47085 338 aa2.97□□□□□ -1.93
PEP8YJL053W MNT2P53059 558 aa2.97□□□□□ -1.93
PEP8YJL053W YGR054WP53235 642 aaKnown RBP2.97□□□□□ -1.93
PEP8YJL053W TIM50Q02776 476 aa2.97□□□□□ -1.93
PEP8YJL053W EFR3Q03653 782 aaKnown RBP2.97□□□□□ -1.93
PEP8YJL053W YOL057WQ08225 711 aa2.97□□□□□ -1.93
PEP8YJL053W YOR378WQ08902 515 aa2.97□□□□□ -1.93
PEP8YJL053W TGS1Q12052 315 aa2.97□□□□□ -1.93
PEP8YJL053W YEF3P16521 1044 aaKnown RBP2.96□□□□□ -1.94
PEP8YJL053W VPS33P20795 691 aa2.96□□□□□ -1.94
PEP8YJL053W CAP1P28495 268 aaKnown RBP2.96□□□□□ -1.94
PEP8YJL053W TGL1P34163 548 aa2.96□□□□□ -1.94
PEP8YJL053W LOT5P34234 306 aa2.96□□□□□ -1.94
PEP8YJL053W RMA1P36001 430 aaKnown RBP2.96□□□□□ -1.94
PEP8YJL053W RTT107P38850 1070 aa2.96□□□□□ -1.94
PEP8YJL053W YJL193WP39542 402 aa2.96□□□□□ -1.94
PEP8YJL053W ASK10P48361 1146 aa2.96□□□□□ -1.94
PEP8YJL053W PAP2P53632 584 aaKnown RBP2.96□□□□□ -1.94
PEP8YJL053W TRI1Q05024 226 aa2.96□□□□□ -1.94
PEP8YJL053W MLC2Q06580 163 aa2.96□□□□□ -1.94
PEP8YJL053W VAS1P07806 1104 aaKnown RBP2.95□□□□□ -1.94
PEP8YJL053W HOP1P20050 605 aa2.95□□□□□ -1.94
PEP8YJL053W RNR3P21672 869 aaKnown RBP2.95□□□□□ -1.94
PEP8YJL053W YOX1P34161 385 aa2.95□□□□□ -1.94
PEP8YJL053W EHT1P38295 451 aa2.95□□□□□ -1.94
PEP8YJL053W YLF2P38746 405 aa2.95□□□□□ -1.94
PEP8YJL053W MET30P39014 640 aa2.95□□□□□ -1.94
PEP8YJL053W LRO1P40345 661 aa2.95□□□□□ -1.94
PEP8YJL053W YDL183CP48569 320 aa2.95□□□□□ -1.94
PEP8YJL053W RPL15BP54780 204 aaPredicted RBP2.95□□□□□ -1.94
PEP8YJL053W TGL2P54857 326 aa2.95□□□□□ -1.94
PEP8YJL053W MET14Q02196 202 aa2.95□□□□□ -1.94
PEP8YJL053W WAR1Q03631 944 aa2.95□□□□□ -1.94
PEP8YJL053W SPN1Q06505 410 aaPredicted RBP2.95□□□□□ -1.94
PEP8YJL053W ARP7Q12406 477 aa2.95□□□□□ -1.94
PEP8YJL053W URA3P03962 267 aa2.94□□□□□ -1.94
PEP8YJL053W PCK1P10963 549 aa2.94□□□□□ -1.94
PEP8YJL053W CBP3P21560 335 aa2.94□□□□□ -1.94
PEP8YJL053W ARG1P22768 420 aa2.94□□□□□ -1.94
PEP8YJL053W PTP2P29461 750 aa2.94□□□□□ -1.94
PEP8YJL053W DSS4P32601 143 aa2.94□□□□□ -1.94
PEP8YJL053W YBR139WP38109 508 aa2.94□□□□□ -1.94
PEP8YJL053W SCS2P40075 244 aaKnown RBP2.94□□□□□ -1.94
PEP8YJL053W PUS4P48567 403 aaKnown RBP2.94□□□□□ -1.94
PEP8YJL053W YNR071CP53757 342 aa2.94□□□□□ -1.94
PEP8YJL053W RTK1Q12100 620 aaPredicted RBP2.94□□□□□ -1.94
PEP8YJL053W DBP10Q12389 995 aaKnown RBP2.94□□□□□ -1.94
PEP8YJL053W CTT1P06115 562 aa2.93□□□□□ -1.94
PEP8YJL053W PHO81P17442 1178 aa2.93□□□□□ -1.94
PEP8YJL053W BET2P20133 325 aa2.93□□□□□ -1.94
PEP8YJL053W AIM17P23180 465 aaKnown RBP2.93□□□□□ -1.94
PEP8YJL053W SWD1P39706 426 aa2.93□□□□□ -1.94
PEP8YJL053W VPS27P40343 622 aaKnown RBP2.93□□□□□ -1.94
PEP8YJL053W TPM2P40414 161 aa2.93□□□□□ -1.94
PEP8YJL053W MAD2P40958 196 aa2.93□□□□□ -1.94
PEP8YJL053W GSM1P42950 618 aa2.93□□□□□ -1.94
PEP8YJL053W CRD1Q07560 283 aa2.93□□□□□ -1.94
PEP8YJL053W RRP6Q12149 733 aaKnown RBP2.93□□□□□ -1.94
PEP8YJL053W UBX3Q12229 455 aa2.93□□□□□ -1.94
PEP8YJL053W GAL1P04385 528 aa2.92□□□□□ -1.94
PEP8YJL053W COQ3P27680 312 aa2.92□□□□□ -1.94
PEP8YJL053W CCL1P37366 393 aa2.92□□□□□ -1.94
PEP8YJL053W SCO2P38072 301 aa2.92□□□□□ -1.94
PEP8YJL053W VFA1P40080 203 aa2.92□□□□□ -1.94
PEP8YJL053W TDA10P42938 290 aa2.92□□□□□ -1.94
PEP8YJL053W SAE2P46946 345 aa2.92□□□□□ -1.94
PEP8YJL053W IDS2P46958 469 aa2.92□□□□□ -1.94
PEP8YJL053W RTS3P53289 263 aa2.92□□□□□ -1.94
PEP8YJL053W TEP1P53916 434 aa2.92□□□□□ -1.94
PEP8YJL053W VMS1Q04311 632 aaKnown RBP2.92□□□□□ -1.94
PEP8YJL053W ARR3Q06598 404 aa2.92□□□□□ -1.94
PEP8YJL053W DIN7Q12086 430 aa2.92□□□□□ -1.94
PEP8YJL053W YOL114CQ12322 202 aa2.92□□□□□ -1.94
PEP8YJL053W ADH4P10127 382 aa2.91□□□□□ -1.94
PEP8YJL053W LNP1P38878 278 aa2.91□□□□□ -1.94
PEP8YJL053W RRP8P38961 392 aaKnown RBP2.91□□□□□ -1.94
PEP8YJL053W HIS6P40545 261 aa2.91□□□□□ -1.94
PEP8YJL053W FAF1P40546 346 aaPredicted RBP2.91□□□□□ -1.94
PEP8YJL053W UBX4P54730 416 aa2.91□□□□□ -1.94
PEP8YJL053W CEG1Q01159 459 aaPredicted RBP2.91□□□□□ -1.94
PEP8YJL053W VPS64Q03944 604 aa2.91□□□□□ -1.94
PEP8YJL053W DSE3Q08729 430 aa2.91□□□□□ -1.94
PEP8YJL053W YCR043CP25361 127 aa2.9□□□□□ -1.95
PEP8YJL053W MSH1P25846 959 aa2.9□□□□□ -1.95
PEP8YJL053W RPT3P33298 428 aaKnown RBP2.9□□□□□ -1.95
PEP8YJL053W PTH2P34222 208 aa2.9□□□□□ -1.95
PEP8YJL053W FMP46P36141 133 aaKnown RBP2.9□□□□□ -1.95
PEP8YJL053W APM3P38153 483 aa2.9□□□□□ -1.95
PEP8YJL053W SDH8P38345 138 aa2.9□□□□□ -1.95
PEP8YJL053W IMA5P40884 581 aa2.9□□□□□ -1.95
PEP8YJL053W QRI7P43122 407 aa2.9□□□□□ -1.95
PEP8YJL053W RPS15Q01855 142 aaKnown RBP2.9□□□□□ -1.95
PEP8YJL053W TRS31Q03337 283 aa2.9□□□□□ -1.95
PEP8YJL053W USA1Q03714 838 aa2.9□□□□□ -1.95
PEP8YJL053W ARA2Q04212 335 aa2.9□□□□□ -1.95
PEP8YJL053W RTT103Q05543 409 aa2.9□□□□□ -1.95
PEP8YJL053W AAD4Q07747 329 aa2.9□□□□□ -1.95
PEP8YJL053W CRT10Q08226 957 aa2.9□□□□□ -1.95
PEP8YJL053W PIF1P07271 859 aa2.89□□□□□ -1.95
PEP8YJL053W MIS1P09440 975 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms