RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeast

Gene SEC28, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC28	YIL076W	YCR061W	P25639	631 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	RPS7A	P26786	190 aa	Known RBP	4.85	□□□□□ -1.63
SEC28	YIL076W	IMD2	P38697	523 aa	Known RBP	4.85	□□□□□ -1.63
SEC28	YIL076W	CIR1	P42940	261 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	IRC7	P43623	340 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	IMD3	P50095	523 aa	Known RBP	4.85	□□□□□ -1.63
SEC28	YIL076W	SCW4	P53334	386 aa	Known RBP	4.85	□□□□□ -1.63
SEC28	YIL076W	SNU56	Q03782	492 aa	Known RBP	4.85	□□□□□ -1.63
SEC28	YIL076W	PLM2	Q04383	521 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	TRI1	Q05024	226 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	YDL242W	Q07746	117 aa		4.85	□□□□□ -1.63
SEC28	YIL076W	CET1	O13297	549 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC28	YIL076W	VAS1	P07806	1104 aa	Known RBP	4.84	□□□□□ -1.63
SEC28	YIL076W	MAK32	P23060	363 aa		4.84	□□□□□ -1.63
SEC28	YIL076W	PCI8	P40512	444 aa		4.84	□□□□□ -1.63
SEC28	YIL076W	YIL024C	P40543	189 aa		4.84	□□□□□ -1.63
SEC28	YIL076W	SCS3	P53012	380 aa		4.84	□□□□□ -1.63
SEC28	YIL076W	FOL1	P53848	824 aa		4.84	□□□□□ -1.63
SEC28	YIL076W	ASK1	P35734	292 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	SAW1	P39735	261 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	POL31	P46957	487 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	IRC8	P47046	822 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	COP1	P53622	1201 aa	Known RBP	4.83	□□□□□ -1.64
SEC28	YIL076W	ACS1	Q01574	713 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	HER1	Q12276	1246 aa		4.83	□□□□□ -1.64
SEC28	YIL076W	CTT1	P06115	562 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	ADH4	P10127	382 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	MRC1	P25588	1096 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	COQ3	P27680	312 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	KES1	P35844	434 aa	Known RBP	4.82	□□□□□ -1.64
SEC28	YIL076W	TAF5	P38129	798 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	SPC97	P38863	823 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	ARB1	P40024	610 aa	Known RBP	4.82	□□□□□ -1.64
SEC28	YIL076W	RAD26	P40352	1085 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	IMA5	P40884	581 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	PUS4	P48567	403 aa	Known RBP	4.82	□□□□□ -1.64
SEC28	YIL076W	YNL058C	P53947	316 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	AAT1	Q01802	451 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	CRF1	Q04930	467 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	RAD34	Q06665	692 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	YOR389W	Q08912	624 aa		4.82	□□□□□ -1.64
SEC28	YIL076W	YPR089W	O13585	888 aa		4.81	□□□□□ -1.64
SEC28	YIL076W	SDS22	P36047	338 aa		4.81	□□□□□ -1.64
SEC28	YIL076W	YMR124W	P39523	943 aa	Known RBP	4.81	□□□□□ -1.64
SEC28	YIL076W	CFD1	P40558	293 aa		4.81	□□□□□ -1.64
SEC28	YIL076W	CIN1	P40987	1014 aa		4.81	□□□□□ -1.64
SEC28	YIL076W	CNM67	P53865	581 aa	Known RBP	4.81	□□□□□ -1.64
SEC28	YIL076W	LYS21	Q12122	440 aa	Known RBP	4.81	□□□□□ -1.64
SEC28	YIL076W	ILS1	P09436	1072 aa	Known RBP	4.8	□□□□□ -1.64
SEC28	YIL076W	YER190C-B	P0CX94	160 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	YEL077W-A	P0CX95	160 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	YGR296C-B	P0CX96	160 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	YPL283W-B	P0CX97	160 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	YPR204C-A	P0CX98	160 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	KGD2	P19262	463 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC28	YIL076W	YLF2	P38746	405 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	YNL034W	P53963	612 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	TDA9	Q04545	1251 aa		4.8	□□□□□ -1.64
SEC28	YIL076W	SES1	P07284	462 aa	Known RBP	4.79	□□□□□ -1.64
SEC28	YIL076W	SSB1	P11484	613 aa	Known RBP	4.79	□□□□□ -1.64
SEC28	YIL076W	FLO5	P38894	1075 aa		4.79	□□□□□ -1.64
SEC28	YIL076W	SWD1	P39706	426 aa		4.79	□□□□□ -1.64
SEC28	YIL076W	SSB2	P40150	613 aa	Known RBP	4.79	□□□□□ -1.64
SEC28	YIL076W	NOP2	P40991	618 aa	Known RBP	4.78	□□□□□ -1.64
SEC28	YIL076W	ASK10	P48361	1146 aa		4.78	□□□□□ -1.64
SEC28	YIL076W	VPS64	Q03944	604 aa		4.78	□□□□□ -1.64
SEC28	YIL076W	CRD1	Q07560	283 aa		4.78	□□□□□ -1.64
SEC28	YIL076W	ERV46	P39727	415 aa		4.77	□□□□□ -1.65
SEC28	YIL076W	ESF2	P53743	316 aa	Known RBP	4.77	□□□□□ -1.65
SEC28	YIL076W	AAD4	Q07747	329 aa		4.77	□□□□□ -1.65
SEC28	YIL076W	PFA4	Q12006	378 aa		4.77	□□□□□ -1.65
SEC28	YIL076W	GET3	Q12154	354 aa	Known RBP	4.77	□□□□□ -1.65
SEC28	YIL076W	GAL4	P04386	881 aa		4.76	□□□□□ -1.65
SEC28	YIL076W	YUR1	P26725	428 aa		4.76	□□□□□ -1.65
SEC28	YIL076W	VBA2	P38358	474 aa	Known RBP	4.76	□□□□□ -1.65
SEC28	YIL076W	RPL15B	P54780	204 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC28	YIL076W	YAT1	P80235	687 aa		4.76	□□□□□ -1.65
SEC28	YIL076W	CEG1	Q01159	459 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC28	YIL076W	MRPL1	Q04599	285 aa		4.76	□□□□□ -1.65
SEC28	YIL076W	AIM6	Q07716	390 aa		4.76	□□□□□ -1.65
SEC28	YIL076W	YCP4	P25349	247 aa	Known RBP	4.75	□□□□□ -1.65
SEC28	YIL076W	MGM1	P32266	881 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	GSH1	P32477	678 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	SIP1	P32578	815 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	RPT3	P33298	428 aa	Known RBP	4.75	□□□□□ -1.65
SEC28	YIL076W	RPF2	P36160	344 aa	Known RBP	4.75	□□□□□ -1.65
SEC28	YIL076W	ERC1	P38767	581 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	UBP7	P40453	1071 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	ARA2	Q04212	335 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	YPL191C	Q08930	360 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	ARP7	Q12406	477 aa		4.75	□□□□□ -1.65
SEC28	YIL076W	ILV2	P07342	687 aa	Known RBP	4.74	□□□□□ -1.65
SEC28	YIL076W	PXL1	P36166	706 aa		4.74	□□□□□ -1.65
SEC28	YIL076W	TGL2	P54857	326 aa		4.74	□□□□□ -1.65
SEC28	YIL076W	PDE1	P22434	369 aa		4.73	□□□□□ -1.65
SEC28	YIL076W	YPT1	P01123	206 aa	Known RBP	4.72	□□□□□ -1.65
SEC28	YIL076W	AIM17	P23180	465 aa	Known RBP	4.72	□□□□□ -1.65
SEC28	YIL076W	MEP2	P41948	499 aa		4.72	□□□□□ -1.65
SEC28	YIL076W	STB2	P46679	850 aa		4.72	□□□□□ -1.65
SEC28	YIL076W	MAD3	P47074	515 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms