RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W COS12P53053 380 aa3.59□□□□□ -1.83
RPF1YHR088W PLM2Q04383 521 aa3.59□□□□□ -1.83
RPF1YHR088W ATP12P22135 325 aa3.58□□□□□ -1.84
RPF1YHR088W YIL152WP40455 235 aa3.58□□□□□ -1.84
RPF1YHR088W MNT2P53059 558 aa3.58□□□□□ -1.84
RPF1YHR088W DSE3Q08729 430 aa3.58□□□□□ -1.84
RPF1YHR088W NDD1Q08887 554 aa3.58□□□□□ -1.84
RPF1YHR088W HOS1Q12214 470 aa3.58□□□□□ -1.84
RPF1YHR088W YGR161W-CQ3E744 92 aa3.58□□□□□ -1.84
RPF1YHR088W LNP1P38878 278 aa3.57□□□□□ -1.84
RPF1YHR088W FPR3P38911 411 aaKnown RBP3.57□□□□□ -1.84
RPF1YHR088W GPP2P40106 250 aaKnown RBP3.57□□□□□ -1.84
RPF1YHR088W YLR281CQ05863 155 aa3.57□□□□□ -1.84
RPF1YHR088W RAD34Q06665 692 aa3.57□□□□□ -1.84
RPF1YHR088W YOR378WQ08902 515 aa3.57□□□□□ -1.84
RPF1YHR088W YOR389WQ08912 624 aa3.57□□□□□ -1.84
RPF1YHR088W YPL191CQ08930 360 aa3.57□□□□□ -1.84
RPF1YHR088W AMD2P22580 549 aa3.56□□□□□ -1.84
RPF1YHR088W ARG1P22768 420 aa3.56□□□□□ -1.84
RPF1YHR088W RRP43P25359 394 aaPredicted RBP3.56□□□□□ -1.84
RPF1YHR088W PET309P32522 965 aaPredicted RBP3.56□□□□□ -1.84
RPF1YHR088W SCO2P38072 301 aa3.56□□□□□ -1.84
RPF1YHR088W EMP65P40085 556 aa3.56□□□□□ -1.84
RPF1YHR088W IDS2P46958 469 aa3.56□□□□□ -1.84
RPF1YHR088W YAT1P80235 687 aa3.56□□□□□ -1.84
RPF1YHR088W UBP16Q02863 499 aa3.56□□□□□ -1.84
RPF1YHR088W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
RPF1YHR088W SER1P33330 395 aaKnown RBP3.55□□□□□ -1.84
RPF1YHR088W GND1P38720 489 aaKnown RBP3.55□□□□□ -1.84
RPF1YHR088W ORC5P50874 479 aa3.55□□□□□ -1.84
RPF1YHR088W HOL1P53389 586 aa3.55□□□□□ -1.84
RPF1YHR088W ARA2Q04212 335 aa3.55□□□□□ -1.84
RPF1YHR088W TRI1Q05024 226 aa3.55□□□□□ -1.84
RPF1YHR088W YDL242WQ07746 117 aa3.55□□□□□ -1.84
RPF1YHR088W MLH2Q07980 695 aa3.55□□□□□ -1.84
RPF1YHR088W RTC1Q08281 1341 aa3.54□□□□□ -1.84
RPF1YHR088W CNA1P23287 553 aa3.54□□□□□ -1.84
RPF1YHR088W SWC3P31376 625 aa3.54□□□□□ -1.84
RPF1YHR088W SAP1P39955 897 aaKnown RBP3.54□□□□□ -1.84
RPF1YHR088W YJL107CP42947 387 aa3.54□□□□□ -1.84
RPF1YHR088W GSM1P42950 618 aa3.54□□□□□ -1.84
RPF1YHR088W YJR142WP47173 342 aa3.54□□□□□ -1.84
RPF1YHR088W SLD3P53135 668 aa3.54□□□□□ -1.84
RPF1YHR088W YML119WQ03208 357 aa3.54□□□□□ -1.84
RPF1YHR088W YER175W-AQ8TGU4 54 aa3.54□□□□□ -1.84
RPF1YHR088W Q0010Q9ZZX9 128 aa3.54□□□□□ -1.84
RPF1YHR088W URA3P03962 267 aa3.53□□□□□ -1.84
RPF1YHR088W GAL4P04386 881 aa3.53□□□□□ -1.84
RPF1YHR088W PHO2P07269 559 aa3.53□□□□□ -1.84
RPF1YHR088W SES1P07284 462 aaKnown RBP3.53□□□□□ -1.84
RPF1YHR088W YCR061WP25639 631 aa3.53□□□□□ -1.84
RPF1YHR088W ARC40P38328 384 aaKnown RBP3.53□□□□□ -1.84
RPF1YHR088W VBA2P38358 474 aaKnown RBP3.53□□□□□ -1.84
RPF1YHR088W VPS8P39702 1274 aa3.53□□□□□ -1.84
RPF1YHR088W STL1P39932 569 aa3.53□□□□□ -1.84
RPF1YHR088W TES1P41903 349 aaKnown RBP3.53□□□□□ -1.84
RPF1YHR088W SPC105P53148 917 aa3.53□□□□□ -1.84
RPF1YHR088W YGL081WP53156 320 aa3.53□□□□□ -1.84
RPF1YHR088W GIS2P53849 153 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84 RIP-Chip
RPF1YHR088W CWC2Q12046 339 aaPredicted RBP3.53□□□□□ -1.84
RPF1YHR088W RRI1Q12468 440 aa3.53□□□□□ -1.84
RPF1YHR088W YCR043CP25361 127 aa3.52□□□□□ -1.85
RPF1YHR088W RPF2P36160 344 aaKnown RBP3.52□□□□□ -1.85
RPF1YHR088W RKM3P38222 552 aa3.52□□□□□ -1.85
RPF1YHR088W ARN1P38731 627 aa3.52□□□□□ -1.85
RPF1YHR088W MAD2P40958 196 aa3.52□□□□□ -1.85
RPF1YHR088W NIT2P47016 307 aa3.52□□□□□ -1.85
RPF1YHR088W YNR071CP53757 342 aa3.52□□□□□ -1.85
RPF1YHR088W SCW10Q04951 389 aa3.52□□□□□ -1.85
RPF1YHR088W SEC18P18759 758 aaKnown RBP3.51□□□□□ -1.85
RPF1YHR088W TPA1P40032 644 aaKnown RBP3.51□□□□□ -1.85
RPF1YHR088W YPT11P48559 417 aa3.51□□□□□ -1.85
RPF1YHR088W YNL144CP53907 740 aa3.51□□□□□ -1.85
RPF1YHR088W YTH1Q06102 208 aaPredicted RBP3.51□□□□□ -1.85
RPF1YHR088W DIN7Q12086 430 aa3.51□□□□□ -1.85
RPF1YHR088W COX11P19516 300 aaKnown RBP3.5□□□□□ -1.85
RPF1YHR088W MSS51P32335 436 aa3.5□□□□□ -1.85
RPF1YHR088W DAL3P32459 195 aa3.5□□□□□ -1.85
RPF1YHR088W NIC96P34077 839 aa3.5□□□□□ -1.85
RPF1YHR088W TAF5P38129 798 aa3.5□□□□□ -1.85
RPF1YHR088W MET30P39014 640 aa3.5□□□□□ -1.85
RPF1YHR088W YIL169CP40442 995 aa3.5□□□□□ -1.85
RPF1YHR088W YGL260WP53056 76 aa3.5□□□□□ -1.85
RPF1YHR088W YML053CQ04978 212 aa3.5□□□□□ -1.85
RPF1YHR088W ECM22Q05958 814 aaPredicted RBP3.5□□□□□ -1.85
RPF1YHR088W PEX15Q08215 383 aa3.5□□□□□ -1.85
RPF1YHR088W GSH2Q08220 491 aa3.5□□□□□ -1.85
RPF1YHR088W PFA4Q12006 378 aa3.5□□□□□ -1.85
RPF1YHR088W RTK1Q12100 620 aaPredicted RBP3.5□□□□□ -1.85
RPF1YHR088W CTT1P06115 562 aa3.49□□□□□ -1.85
RPF1YHR088W ILV2P07342 687 aaKnown RBP3.49□□□□□ -1.85
RPF1YHR088W ERV46P39727 415 aa3.49□□□□□ -1.85
RPF1YHR088W VFA1P40080 203 aa3.49□□□□□ -1.85
RPF1YHR088W VRG4P40107 337 aa3.49□□□□□ -1.85
RPF1YHR088W YMR034CQ05131 434 aaPredicted RBP3.49□□□□□ -1.85
RPF1YHR088W NRT1Q08485 598 aa3.49□□□□□ -1.85
RPF1YHR088W TRE2Q08693 809 aa3.49□□□□□ -1.85
RPF1YHR088W PSF3Q12146 194 aa3.49□□□□□ -1.85
RPF1YHR088W PTC6P25646 442 aa3.48□□□□□ -1.85
RPF1YHR088W STB5P38699 743 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms