RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C ATP25Q03153 612 aa3.07□□□□□ -1.92
NMD2YHR077C YET2Q04210 160 aa3.07□□□□□ -1.92
NMD2YHR077C MDM20Q12387 796 aaKnown RBP3.07□□□□□ -1.92
NMD2YHR077C KCS1Q12494 1050 aa3.07□□□□□ -1.92
NMD2YHR077C GAL80P04387 435 aa3.06□□□□□ -1.92
NMD2YHR077C SNA3P14359 133 aa3.06□□□□□ -1.92
NMD2YHR077C ACO1P19414 778 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
NMD2YHR077C AFT1P22149 690 aa3.06□□□□□ -1.92
NMD2YHR077C MEF1P25039 761 aa3.06□□□□□ -1.92
NMD2YHR077C GAC1P28006 793 aa3.06□□□□□ -1.92
NMD2YHR077C URA10P30402 227 aa3.06□□□□□ -1.92
NMD2YHR077C RAD16P31244 790 aa3.06□□□□□ -1.92
NMD2YHR077C DSS4P32601 143 aa3.06□□□□□ -1.92
NMD2YHR077C TFC3P34111 1160 aa3.06□□□□□ -1.92
NMD2YHR077C DRE2P36152 348 aa3.06□□□□□ -1.92
NMD2YHR077C ALG5P40350 334 aa3.06□□□□□ -1.92
NMD2YHR077C DPH1P40487 425 aaKnown RBP3.06□□□□□ -1.92
NMD2YHR077C CDC1P40986 491 aa3.06□□□□□ -1.92
NMD2YHR077C ARI1P53111 347 aaKnown RBP3.06□□□□□ -1.92
NMD2YHR077C HST2P53686 357 aa3.06□□□□□ -1.92
NMD2YHR077C NOP13P53883 403 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
NMD2YHR077C MSH6Q03834 1242 aa3.06□□□□□ -1.92
NMD2YHR077C CDC123Q05791 360 aa3.06□□□□□ -1.92
NMD2YHR077C ASA1Q06822 443 aa3.06□□□□□ -1.92
NMD2YHR077C TPO1Q07824 586 aa3.06□□□□□ -1.92
NMD2YHR077C FMP25Q08023 583 aa3.06□□□□□ -1.92
NMD2YHR077C ICL2Q12031 575 aa3.06□□□□□ -1.92
NMD2YHR077C APM4Q99186 491 aa3.06□□□□□ -1.92
NMD2YHR077C PAB1P04147 577 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92 RIP-Chip
NMD2YHR077C ARD1P07347 238 aaPredicted RBP3.06□□□□□ -1.92
NMD2YHR077C YAK1P14680 807 aa3.06□□□□□ -1.92
NMD2YHR077C AMD2P22580 549 aa3.06□□□□□ -1.92
NMD2YHR077C BRL1P38770 471 aa3.06□□□□□ -1.92
NMD2YHR077C MNN1P39106 762 aa3.06□□□□□ -1.92
NMD2YHR077C STL1P39932 569 aa3.06□□□□□ -1.92
NMD2YHR077C ELO3P40319 345 aa3.06□□□□□ -1.92
NMD2YHR077C MAM33P40513 266 aa3.06□□□□□ -1.92
NMD2YHR077C GCV2P49095 1034 aa3.06□□□□□ -1.92
NMD2YHR077C NMA2P53204 395 aa3.06□□□□□ -1.92
NMD2YHR077C YGR127WP53275 312 aa3.06□□□□□ -1.92
NMD2YHR077C YNL058CP53947 316 aa3.06□□□□□ -1.92
NMD2YHR077C CEG1Q01159 459 aaPredicted RBP3.06□□□□□ -1.92
NMD2YHR077C YDR131CQ03899 556 aa3.06□□□□□ -1.92
NMD2YHR077C RSC2Q06488 889 aa3.06□□□□□ -1.92
NMD2YHR077C DNL4Q08387 944 aaPredicted RBP3.06□□□□□ -1.92
NMD2YHR077C DIA2Q08496 732 aaPredicted RBP3.06□□□□□ -1.92
NMD2YHR077C YPR202WQ08993 238 aa3.06□□□□□ -1.92
NMD2YHR077C YPL247CQ12523 523 aa3.06□□□□□ -1.92
NMD2YHR077C YKL018C-AQ3E7A7 99 aa3.06□□□□□ -1.92
NMD2YHR077C REC107P21651 314 aa3.06□□□□□ -1.92
NMD2YHR077C SDH2P21801 266 aa3.06□□□□□ -1.92
NMD2YHR077C AAT2P23542 418 aaKnown RBP3.06□□□□□ -1.92
NMD2YHR077C CSE2P33308 149 aa3.06□□□□□ -1.92
NMD2YHR077C SQT1P35184 431 aa3.06□□□□□ -1.92
NMD2YHR077C KDX1P36005 433 aa3.06□□□□□ -1.92
NMD2YHR077C ALY1P36117 915 aa3.06□□□□□ -1.92
NMD2YHR077C YBR056WP38081 501 aa3.06□□□□□ -1.92
NMD2YHR077C BIT2P38346 545 aa3.06□□□□□ -1.92
NMD2YHR077C TGL3P40308 642 aa3.06□□□□□ -1.92
NMD2YHR077C PEX31P53203 462 aa3.06□□□□□ -1.92
NMD2YHR077C YGR035CP53222 116 aa3.06□□□□□ -1.92
NMD2YHR077C ACL4Q03771 387 aa3.06□□□□□ -1.92
NMD2YHR077C ECM22Q05958 814 aaPredicted RBP3.06□□□□□ -1.92
NMD2YHR077C MCH5Q08777 521 aa3.06□□□□□ -1.92
NMD2YHR077C HAA1Q12753 694 aaKnown RBP3.06□□□□□ -1.92
NMD2YHR077C CCP1P00431 361 aa3.05□□□□□ -1.92
NMD2YHR077C GPA2P10823 449 aa3.05□□□□□ -1.92
NMD2YHR077C KEX2P13134 814 aa3.05□□□□□ -1.92
NMD2YHR077C MET16P18408 261 aaPredicted RBP3.05□□□□□ -1.92
NMD2YHR077C DPH5P32469 300 aaPredicted RBP3.05□□□□□ -1.92
NMD2YHR077C YHL008CP38750 627 aa3.05□□□□□ -1.92
NMD2YHR077C RAD55P38953 406 aa3.05□□□□□ -1.92
NMD2YHR077C SSP120P39931 234 aaKnown RBP3.05□□□□□ -1.92
NMD2YHR077C EDC3P39998 551 aaKnown RBP3.05□□□□□ -1.92
NMD2YHR077C MGS1P40151 587 aa3.05□□□□□ -1.92
NMD2YHR077C RRN7P40992 514 aa3.05□□□□□ -1.92
NMD2YHR077C ILM1P47155 203 aa3.05□□□□□ -1.92
NMD2YHR077C VPS9P54787 451 aa3.05□□□□□ -1.92
NMD2YHR077C LGE1Q02796 332 aaKnown RBP3.05□□□□□ -1.92
NMD2YHR077C PIR3Q03180 325 aa3.05□□□□□ -1.92
NMD2YHR077C YMR155WQ03795 547 aa3.05□□□□□ -1.92
NMD2YHR077C INP2Q03824 705 aa3.05□□□□□ -1.92
NMD2YHR077C RKM2Q03942 479 aa3.05□□□□□ -1.92
NMD2YHR077C HDA3Q06623 655 aa3.05□□□□□ -1.92
NMD2YHR077C CDA1Q06702 301 aa3.05□□□□□ -1.92
NMD2YHR077C SWC7Q06707 132 aa3.05□□□□□ -1.92
NMD2YHR077C YEH2Q07950 538 aa3.05□□□□□ -1.92
NMD2YHR077C DDC1Q08949 612 aa3.05□□□□□ -1.92
NMD2YHR077C UPC2Q12151 913 aa3.05□□□□□ -1.92
NMD2YHR077C NBP2Q12163 236 aa3.05□□□□□ -1.92
NMD2YHR077C RGS2Q99188 309 aa3.05□□□□□ -1.92
NMD2YHR077C TUB1P09733 447 aaKnown RBP3.05□□□□□ -1.92
NMD2YHR077C MPH2P0CD99 609 aa3.05□□□□□ -1.92
NMD2YHR077C PRP6P19735 899 aaPredicted RBP3.05□□□□□ -1.92
NMD2YHR077C PWP1P21304 576 aaKnown RBP3.05□□□□□ -1.92
NMD2YHR077C PHO3P24031 467 aa3.05□□□□□ -1.92
NMD2YHR077C POT1P27796 417 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
NMD2YHR077C ISF1P32488 338 aa3.05□□□□□ -1.92
NMD2YHR077C TKL2P33315 681 aa3.05□□□□□ -1.92
NMD2YHR077C CUE2P36075 443 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms