RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W DDI1P40087 428 aa8.19□□□□□ -1.1
UFD1YGR048W YJL070CP40361 888 aa8.19□□□□□ -1.1
UFD1YGR048W ELP2P42935 788 aa8.19□□□□□ -1.1
UFD1YGR048W IRC6P43615 237 aa8.19□□□□□ -1.1
UFD1YGR048W SRB7P47822 140 aa8.19□□□□□ -1.1
UFD1YGR048W RVB1Q03940 463 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W UTP14Q04500 899 aaKnown RBP8.19□□□□□ -1.1
UFD1YGR048W ENT2Q05785 613 aa8.19□□□□□ -1.1
UFD1YGR048W MLC2Q06580 163 aa8.19□□□□□ -1.1
UFD1YGR048W RSC3Q06639 885 aa8.19□□□□□ -1.1
UFD1YGR048W YPR078CQ06813 372 aa8.19□□□□□ -1.1
UFD1YGR048W ATG20Q07528 640 aa8.19□□□□□ -1.1
UFD1YGR048W ACM1Q08981 209 aa8.19□□□□□ -1.1
UFD1YGR048W YPR202WQ08993 238 aa8.19□□□□□ -1.1
UFD1YGR048W HER1Q12276 1246 aa8.19□□□□□ -1.1
UFD1YGR048W AI5_ALPHAQ9ZZX1 630 aa8.19□□□□□ -1.1
UFD1YGR048W YLR462WO13556 202 aa8.18□□□□□ -1.1
UFD1YGR048W SPS1P08458 490 aa8.18□□□□□ -1.1
UFD1YGR048W CMP2P14747 604 aa8.18□□□□□ -1.1
UFD1YGR048W OM45P16547 393 aa8.18□□□□□ -1.1
UFD1YGR048W HEM15P16622 393 aa8.18□□□□□ -1.1
UFD1YGR048W DBP3P20447 523 aaKnown RBP8.18□□□□□ -1.1
UFD1YGR048W SPB1P25582 841 aaPredicted RBP8.18□□□□□ -1.1
UFD1YGR048W CMK1P27466 446 aaKnown RBP8.18□□□□□ -1.1
UFD1YGR048W PEX3P28795 441 aa8.18□□□□□ -1.1
UFD1YGR048W XRS2P33301 854 aa8.18□□□□□ -1.1
UFD1YGR048W BLI1P35727 113 aa8.18□□□□□ -1.1
UFD1YGR048W YHL049CP38722 271 aa8.18□□□□□ -1.1
UFD1YGR048W SPC97P38863 823 aa8.18□□□□□ -1.1
UFD1YGR048W YEL075CP39972 122 aa8.18□□□□□ -1.1
UFD1YGR048W YER189WP40104 122 aa8.18□□□□□ -1.1
UFD1YGR048W YTA12P40341 825 aa8.18□□□□□ -1.1
UFD1YGR048W PFK26P40433 827 aaKnown RBP8.18□□□□□ -1.1
UFD1YGR048W YFL064CP43540 174 aa8.18□□□□□ -1.1
UFD1YGR048W NUP85P46673 744 aa8.18□□□□□ -1.1
UFD1YGR048W YJL181WP46987 611 aa8.18□□□□□ -1.1
UFD1YGR048W MSE1P48525 536 aa8.18□□□□□ -1.1
UFD1YGR048W ASE1P50275 885 aa8.18□□□□□ -1.1
UFD1YGR048W YNR063WP53749 607 aa8.18□□□□□ -1.1
UFD1YGR048W SLT2Q00772 484 aa8.18□□□□□ -1.1
UFD1YGR048W CDA1Q06702 301 aa8.18□□□□□ -1.1
UFD1YGR048W RAX1Q08760 435 aa8.18□□□□□ -1.1
UFD1YGR048W HUA2Q12134 243 aa8.18□□□□□ -1.1
UFD1YGR048W TAH18Q12181 623 aa8.18□□□□□ -1.1
UFD1YGR048W YBL111CQ3E7Y5 667 aa8.18□□□□□ -1.1
UFD1YGR048W YIL002W-AQ3E7Z5 69 aa8.18□□□□□ -1.1
UFD1YGR048W CHO2P05374 869 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W STI1P15705 589 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
UFD1YGR048W PRR1P28708 518 aa8.17□□□□□ -1.1
UFD1YGR048W NIC96P34077 839 aa8.17□□□□□ -1.1
UFD1YGR048W APL2P36000 726 aaPredicted RBP8.17□□□□□ -1.1
UFD1YGR048W MYO3P36006 1272 aa8.17□□□□□ -1.1
UFD1YGR048W RDH54P38086 958 aa8.17□□□□□ -1.1
UFD1YGR048W PBP2P38151 413 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
UFD1YGR048W RGA1P39083 1007 aa8.17□□□□□ -1.1
UFD1YGR048W FRT2P39734 528 aa8.17□□□□□ -1.1
UFD1YGR048W ALD5P40047 520 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W UBP7P40453 1071 aa8.17□□□□□ -1.1
UFD1YGR048W INP51P40559 946 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W GLG2P47011 380 aa8.17□□□□□ -1.1
UFD1YGR048W LIA1P47120 325 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W MET13P53128 600 aa8.17□□□□□ -1.1
UFD1YGR048W ELA1P53861 379 aaPredicted RBP8.17□□□□□ -1.1
UFD1YGR048W YPL062WQ02781 134 aa8.17□□□□□ -1.1
UFD1YGR048W YPL034WQ03083 165 aa8.17□□□□□ -1.1
UFD1YGR048W SNZ1Q03148 297 aa8.17□□□□□ -1.1
UFD1YGR048W HER2Q03557 464 aa8.17□□□□□ -1.1
UFD1YGR048W YMR226CQ05016 267 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W PEX10Q05568 337 aa8.17□□□□□ -1.1
UFD1YGR048W BDS1Q08347 646 aa8.17□□□□□ -1.1
UFD1YGR048W DIA2Q08496 732 aaPredicted RBP8.17□□□□□ -1.1
UFD1YGR048W MCH5Q08777 521 aa8.17□□□□□ -1.1
UFD1YGR048W ICL2Q12031 575 aa8.17□□□□□ -1.1
UFD1YGR048W RTC5Q12108 567 aaKnown RBP8.17□□□□□ -1.1
UFD1YGR048W YIL177CP40434 1758 aa8.17□□□□□ -1.1
UFD1YGR048W YJL225CP40889 1758 aa8.17□□□□□ -1.1
UFD1YGR048W CCP1P00431 361 aa8.16□□□□□ -1.1
UFD1YGR048W ATP2P00830 511 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W ATP6P00854 259 aa8.16□□□□□ -1.1
UFD1YGR048W GPM1P00950 247 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W THS1P04801 734 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W CBF1P17106 351 aa8.16□□□□□ -1.1
UFD1YGR048W RAD14P28519 371 aa8.16□□□□□ -1.1
UFD1YGR048W MEI4P29467 408 aa8.16□□□□□ -1.1
UFD1YGR048W HBS1P32769 611 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W PTR2P32901 601 aa8.16□□□□□ -1.1
UFD1YGR048W SRP101P32916 621 aa8.16□□□□□ -1.1
UFD1YGR048W SIP2P34164 415 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W TGL4P36165 910 aa8.16□□□□□ -1.1
UFD1YGR048W MRPL17P36528 281 aa8.16□□□□□ -1.1
UFD1YGR048W RXT2P38255 430 aa8.16□□□□□ -1.1
UFD1YGR048W YBR285WP38354 144 aa8.16□□□□□ -1.1
UFD1YGR048W MBP1P39678 833 aa8.16□□□□□ -1.1
UFD1YGR048W SBE2P42223 864 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W XKS1P42826 600 aa8.16□□□□□ -1.1
UFD1YGR048W FET5P43561 622 aa8.16□□□□□ -1.1
UFD1YGR048W SAD1P43589 448 aa8.16□□□□□ -1.1
UFD1YGR048W UTP8P53276 713 aaKnown RBP8.16□□□□□ -1.1
UFD1YGR048W MUK1Q02866 612 aa8.16□□□□□ -1.1
UFD1YGR048W YMR018WQ04364 514 aa8.16□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms