RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W NMA111P53920 997 aa6.95□□□□□ -1.3
NUP49YGL172W VPS9P54787 451 aa6.95□□□□□ -1.3
NUP49YGL172W ADI1Q03677 179 aa6.95□□□□□ -1.3
NUP49YGL172W GRX8Q05926 109 aa6.95□□□□□ -1.3
NUP49YGL172W YCS4Q06156 1176 aa6.95□□□□□ -1.3
NUP49YGL172W YDL129WQ07555 291 aa6.95□□□□□ -1.3
NUP49YGL172W RPS10AQ08745 105 aaPredicted RBP6.95□□□□□ -1.3
NUP49YGL172W YLL056CQ12177 298 aa6.95□□□□□ -1.3
NUP49YGL172W GPM3Q12326 303 aa6.95□□□□□ -1.3
NUP49YGL172W RMP1Q12530 201 aa6.95□□□□□ -1.3
NUP49YGL172W PRP9P19736 530 aaKnown RBP6.94□□□□□ -1.3
NUP49YGL172W UBC6P33296 250 aaPredicted RBP6.94□□□□□ -1.3
NUP49YGL172W OTU2P38747 307 aaKnown RBP6.94□□□□□ -1.3
NUP49YGL172W ATM1P40416 690 aa6.94□□□□□ -1.3
NUP49YGL172W CHS6P40955 746 aa6.94□□□□□ -1.3
NUP49YGL172W YJL132WP47014 750 aa6.94□□□□□ -1.3
NUP49YGL172W TCB2P48231 1178 aa6.94□□□□□ -1.3
NUP49YGL172W PRP31P49704 494 aaPredicted RBP6.94□□□□□ -1.3
NUP49YGL172W SFB2P53953 876 aa6.94□□□□□ -1.3
NUP49YGL172W INP2Q03824 705 aa6.94□□□□□ -1.3
NUP49YGL172W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
NUP49YGL172W ACM1Q08981 209 aa6.94□□□□□ -1.3
NUP49YGL172W SFI1Q12369 946 aa6.94□□□□□ -1.3
NUP49YGL172W AFI1Q99222 893 aa6.94□□□□□ -1.3
NUP49YGL172W RAD5P32849 1169 aaPredicted RBP6.93□□□□□ -1.3
NUP49YGL172W KAP104P38217 918 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W OLA1P38219 394 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W YBP1P38315 674 aa6.93□□□□□ -1.3
NUP49YGL172W POP4P38336 279 aa6.93□□□□□ -1.3
NUP49YGL172W MGE1P38523 228 aa6.93□□□□□ -1.3
NUP49YGL172W PPE1P38796 400 aa6.93□□□□□ -1.3
NUP49YGL172W CKB2P38930 258 aa6.93□□□□□ -1.3
NUP49YGL172W VAC8P39968 578 aa6.93□□□□□ -1.3
NUP49YGL172W YNL320WP42840 284 aa6.93□□□□□ -1.3
NUP49YGL172W RSM26P47141 266 aa6.93□□□□□ -1.3
NUP49YGL172W TRF5P48561 642 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W MRX6P48564 524 aa6.93□□□□□ -1.3
NUP49YGL172W NRD1P53617 575 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
NUP49YGL172W YMR206WQ03695 313 aa6.93□□□□□ -1.3
NUP49YGL172W SWC7Q06707 132 aa6.93□□□□□ -1.3
NUP49YGL172W YLR012CQ07927 99 aa6.93□□□□□ -1.3
NUP49YGL172W AI5_ALPHAQ9ZZX1 630 aa6.93□□□□□ -1.3
NUP49YGL172W CDC8P00572 216 aa6.93□□□□□ -1.3
NUP49YGL172W RPS14AP06367 137 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W CDC24P11433 854 aaPredicted RBP6.93□□□□□ -1.3
NUP49YGL172W SPO16P17122 198 aa6.93□□□□□ -1.3
NUP49YGL172W ARF2P19146 181 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W PHO87P25360 923 aa6.93□□□□□ -1.3
NUP49YGL172W MGT1P26188 188 aa6.93□□□□□ -1.3
NUP49YGL172W MRS6P32864 603 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W RRP1P35178 278 aaPredicted RBP6.93□□□□□ -1.3
NUP49YGL172W ADD66P36040 267 aa6.93□□□□□ -1.3
NUP49YGL172W SRP68P38687 599 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W RPS14BP39516 138 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W DOT6P40059 670 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W MND2P40577 368 aa6.93□□□□□ -1.3
NUP49YGL172W ASN2P49090 572 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W YPL014WQ02606 381 aa6.93□□□□□ -1.3
NUP49YGL172W PEX15Q08215 383 aa6.93□□□□□ -1.3
NUP49YGL172W AAD15Q08361 143 aa6.93□□□□□ -1.3
NUP49YGL172W NDD1Q08887 554 aa6.93□□□□□ -1.3
NUP49YGL172W RIO1Q12196 484 aaKnown RBP6.93□□□□□ -1.3
NUP49YGL172W QCR6P00127 147 aa6.92□□□□□ -1.3
NUP49YGL172W HIS5P07172 385 aa6.92□□□□□ -1.3
NUP49YGL172W REV1P12689 985 aa6.92□□□□□ -1.3
NUP49YGL172W RPO26P20435 155 aa6.92□□□□□ -1.3
NUP49YGL172W KIN3P22209 435 aa6.92□□□□□ -1.3
NUP49YGL172W STE5P32917 917 aa6.92□□□□□ -1.3
NUP49YGL172W SWE1P32944 819 aa6.92□□□□□ -1.3
NUP49YGL172W FUI1P38196 639 aa6.92□□□□□ -1.3
NUP49YGL172W GGA2P38817 585 aaKnown RBP6.92□□□□□ -1.3
NUP49YGL172W HEM14P40012 539 aa6.92□□□□□ -1.3
NUP49YGL172W ERG10P41338 398 aaKnown RBP6.92□□□□□ -1.3
NUP49YGL172W GYP8P43570 497 aa6.92□□□□□ -1.3
NUP49YGL172W ROK1P45818 564 aaPredicted RBP6.92□□□□□ -1.3
NUP49YGL172W YNR063WP53749 607 aa6.92□□□□□ -1.3
NUP49YGL172W IMP4P53941 290 aaKnown RBP6.92□□□□□ -1.3
NUP49YGL172W PNP1Q05788 311 aa6.92□□□□□ -1.3
NUP49YGL172W JIP5Q06214 492 aaPredicted RBP6.92□□□□□ -1.3
NUP49YGL172W IRC10Q08118 586 aa6.92□□□□□ -1.3
NUP49YGL172W NRT1Q08485 598 aa6.92□□□□□ -1.3
NUP49YGL172W NUR1Q12066 484 aa6.92□□□□□ -1.3
NUP49YGL172W STB3Q12427 513 aa6.92□□□□□ -1.3
NUP49YGL172W AVL9Q12500 764 aa6.92□□□□□ -1.3
NUP49YGL172W CCH1P50077 2039 aa6.91□□□□□ -1.3
NUP49YGL172W MIS1P09440 975 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W YML002WP0CF17 737 aa6.91□□□□□ -1.3
NUP49YGL172W HAP4P14064 554 aa6.91□□□□□ -1.3
NUP49YGL172W PAT1P25644 796 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W UTR2P32623 467 aa6.91□□□□□ -1.3
NUP49YGL172W MRPL40P36534 297 aa6.91□□□□□ -1.3
NUP49YGL172W YAT2P40017 923 aa6.91□□□□□ -1.3
NUP49YGL172W DLD2P46681 530 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W AMA1P50082 593 aa6.91□□□□□ -1.3
NUP49YGL172W TIM13P53299 105 aa6.91□□□□□ -1.3
NUP49YGL172W YNR014WP53719 212 aa6.91□□□□□ -1.3
NUP49YGL172W YNR065CP53751 1116 aa6.91□□□□□ -1.3
NUP49YGL172W RPL22BP56628 122 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W ENT5Q03769 411 aaKnown RBP6.91□□□□□ -1.3
NUP49YGL172W ARP9Q05123 467 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms