RNA–Protein interactions for RNA: YER089C

PTC2, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC2, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC2	YER089C	KCS1	Q12494	1050 aa		13.64	□□□□□ -0.23
PTC2	YER089C	YEL077C	Q3E7X8	1277 aa		13.64	□□□□□ -0.23
PTC2	YER089C	ADY2	P25613	283 aa		13.63	□□□□□ -0.23
PTC2	YER089C	CYM1	P32898	989 aa		13.63	□□□□□ -0.23
PTC2	YER089C	FIR1	P40020	876 aa		13.63	□□□□□ -0.23
PTC2	YER089C	SNG1	P46950	547 aa		13.63	□□□□□ -0.23
PTC2	YER089C	CCT8	P47079	568 aa	Known RBP	13.63	□□□□□ -0.23
PTC2	YER089C	ENT5	Q03769	411 aa	Known RBP	13.63	□□□□□ -0.23
PTC2	YER089C	INP2	Q03824	705 aa		13.63	□□□□□ -0.23
PTC2	YER089C	YSH1	Q06224	779 aa	Predicted RBP	13.63	□□□□□ -0.23
PTC2	YER089C	ALR1	Q08269	859 aa		13.63	□□□□□ -0.23
PTC2	YER089C	GAL11	P19659	1081 aa		13.62	□□□□□ -0.23
PTC2	YER089C	CAD1	P24813	409 aa	Known RBP	13.62	□□□□□ -0.23
PTC2	YER089C	RPC19	P28000	142 aa	Known RBP	13.62	□□□□□ -0.23
PTC2	YER089C	NDI1	P32340	513 aa		13.62	□□□□□ -0.23
PTC2	YER089C	YJL206C	P39529	758 aa		13.62	□□□□□ -0.23
PTC2	YER089C	CNN1	P43618	361 aa		13.62	□□□□□ -0.23
PTC2	YER089C	MRX6	P48564	524 aa		13.62	□□□□□ -0.23
PTC2	YER089C	COP1	P53622	1201 aa	Known RBP	13.62	□□□□□ -0.23
PTC2	YER089C	MET14	Q02196	202 aa		13.62	□□□□□ -0.23
PTC2	YER089C	YPL109C	Q02981	657 aa		13.62	□□□□□ -0.23
PTC2	YER089C	RLI1	Q03195	608 aa	Known RBP	13.62	□□□□□ -0.23
PTC2	YER089C	MRI1	Q06489	411 aa	Known RBP	13.62	□□□□□ -0.23
PTC2	YER089C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	13.62	□□□□□ -0.23	not detected
PTC2	YER089C	LCB4	Q12246	624 aa		13.62	□□□□□ -0.23
PTC2	YER089C	LDB17	Q12342	491 aa		13.62	□□□□□ -0.23
PTC2	YER089C	RNA1	P11745	407 aa	Known RBP	13.61	□□□□□ -0.23
PTC2	YER089C	INO1	P11986	533 aa		13.61	□□□□□ -0.23
PTC2	YER089C	HRR25	P29295	494 aa	Known RBP	13.61	□□□□□ -0.23
PTC2	YER089C	RIM1	P32445	135 aa	Known RBP	13.61	□□□□□ -0.23
PTC2	YER089C	TSA1	P34760	196 aa	Known RBP	13.61	□□□□□ -0.23
PTC2	YER089C	RDH54	P38086	958 aa		13.61	□□□□□ -0.23
PTC2	YER089C	ERP5	P38819	212 aa		13.61	□□□□□ -0.23
PTC2	YER089C	RTT101	P47050	842 aa		13.61	□□□□□ -0.23
PTC2	YER089C	YNL058C	P53947	316 aa		13.61	□□□□□ -0.23
PTC2	YER089C	CDC123	Q05791	360 aa		13.61	□□□□□ -0.23
PTC2	YER089C	YLR177W	Q06251	628 aa		13.61	□□□□□ -0.23
PTC2	YER089C	SWC7	Q06707	132 aa		13.61	□□□□□ -0.23
PTC2	YER089C	SVS1	Q12254	260 aa		13.61	□□□□□ -0.23
PTC2	YER089C	NOT5	Q12514	560 aa	Predicted RBP	13.61	□□□□□ -0.23
PTC2	YER089C	RAD3	P06839	778 aa		13.6	□□□□□ -0.23
PTC2	YER089C	PAT1	P25644	796 aa	Known RBP	13.6	□□□□□ -0.23
PTC2	YER089C	BEM3	P32873	1128 aa		13.6	□□□□□ -0.23
PTC2	YER089C	GCS1	P35197	352 aa		13.6	□□□□□ -0.23
PTC2	YER089C	RIM2	P38127	377 aa		13.6	□□□□□ -0.23
PTC2	YER089C	YBR225W	P38321	900 aa		13.6	□□□□□ -0.23
PTC2	YER089C	CRP1	P38845	465 aa	Known RBP	13.6	□□□□□ -0.23
PTC2	YER089C	FAR3	P46671	204 aa		13.6	□□□□□ -0.23
PTC2	YER089C	YMR209C	Q03648	457 aa		13.6	□□□□□ -0.23
PTC2	YER089C	SLD7	Q08457	257 aa		13.6	□□□□□ -0.23
PTC2	YER089C	RGS2	Q99188	309 aa		13.6	□□□□□ -0.23
PTC2	YER089C	ARD1	P07347	238 aa	Predicted RBP	13.59	□□□□□ -0.23
PTC2	YER089C	APE1	P14904	514 aa		13.59	□□□□□ -0.23
PTC2	YER089C	HEM3	P28789	327 aa		13.59	□□□□□ -0.23
PTC2	YER089C	RRP14	P36080	434 aa	Known RBP	13.59	□□□□□ -0.23
PTC2	YER089C	RFS1	P38234	210 aa	Known RBP	13.59	□□□□□ -0.23
PTC2	YER089C	RFC3	P38629	340 aa		13.59	□□□□□ -0.23
PTC2	YER089C	YFL052W	P43551	465 aa		13.59	□□□□□ -0.23
PTC2	YER089C	ROK1	P45818	564 aa	Predicted RBP	13.59	□□□□□ -0.23
PTC2	YER089C	TAF11	Q04226	346 aa		13.59	□□□□□ -0.23
PTC2	YER089C	RSC2	Q06488	889 aa		13.59	□□□□□ -0.23
PTC2	YER089C	DAL1	P32375	460 aa		13.58	□□□□□ -0.23
PTC2	YER089C	TOA1	P32773	286 aa		13.58	□□□□□ -0.23
PTC2	YER089C	MRS6	P32864	603 aa	Known RBP	13.58	□□□□□ -0.23
PTC2	YER089C	YFL040W	P43562	540 aa		13.58	□□□□□ -0.23
PTC2	YER089C	DLD2	P46681	530 aa	Known RBP	13.58	□□□□□ -0.23
PTC2	YER089C	GND2	P53319	492 aa		13.58	□□□□□ -0.23
PTC2	YER089C	GCN5	Q03330	439 aa		13.58	□□□□□ -0.23
PTC2	YER089C	ADY3	Q07732	790 aa		13.58	□□□□□ -0.23
PTC2	YER089C	AFI1	Q99222	893 aa		13.58	□□□□□ -0.23
PTC2	YER089C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	13.58	□□□□□ -0.24	not detected
PTC2	YER089C	SEC14	P24280	304 aa	Known RBP	13.58	□□□□□ -0.24
PTC2	YER089C	OXP1	P28273	1286 aa		13.58	□□□□□ -0.24
PTC2	YER089C	YSC84	P32793	468 aa		13.58	□□□□□ -0.24
PTC2	YER089C	STE13	P33894	931 aa		13.58	□□□□□ -0.24
PTC2	YER089C	YKR051W	P36142	418 aa		13.58	□□□□□ -0.24
PTC2	YER089C	ECM13	P38195	257 aa		13.58	□□□□□ -0.24
PTC2	YER089C	KAP104	P38217	918 aa	Known RBP	13.58	□□□□□ -0.24
PTC2	YER089C	SRP68	P38687	599 aa	Known RBP	13.58	□□□□□ -0.24
PTC2	YER089C	ARC1	P46672	376 aa	Known RBP	13.58	□□□□□ -0.24
PTC2	YER089C	NNF2	P53253	936 aa		13.58	□□□□□ -0.24
PTC2	YER089C	COX5A	P00424	153 aa		13.57	□□□□□ -0.24
PTC2	YER089C	ENO2	P00925	437 aa	Known RBP	13.57	□□□□□ -0.24
PTC2	YER089C	MAS1	P10507	462 aa		13.57	□□□□□ -0.24
PTC2	YER089C	AMD2	P22580	549 aa		13.57	□□□□□ -0.24
PTC2	YER089C	MSH2	P25847	964 aa		13.57	□□□□□ -0.24
PTC2	YER089C	GDA1	P32621	518 aa		13.57	□□□□□ -0.24
PTC2	YER089C	PHO89	P38361	574 aa		13.57	□□□□□ -0.24
PTC2	YER089C	URA8	P38627	578 aa	Predicted RBP	13.57	□□□□□ -0.24
PTC2	YER089C	ELO3	P40319	345 aa		13.57	□□□□□ -0.24
PTC2	YER089C	MAD3	P47074	515 aa		13.57	□□□□□ -0.24
PTC2	YER089C	BUD32	P53323	261 aa		13.57	□□□□□ -0.24
PTC2	YER089C	SIW14	P53965	281 aa		13.57	□□□□□ -0.24
PTC2	YER089C	UBP2	Q01476	1272 aa		13.57	□□□□□ -0.24
PTC2	YER089C	HER2	Q03557	464 aa		13.57	□□□□□ -0.24
PTC2	YER089C	FMN1	Q03778	218 aa		13.57	□□□□□ -0.24
PTC2	YER089C	NHX1	Q04121	633 aa		13.57	□□□□□ -0.24
PTC2	YER089C	OSW1	Q08692	278 aa		13.57	□□□□□ -0.24
PTC2	YER089C	MIS1	P09440	975 aa	Known RBP	13.56	□□□□□ -0.24
PTC2	YER089C	EXO70	P19658	623 aa		13.56	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms