RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SMY1P32364 656 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C FRD1P32614 470 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C NFU1P32860 256 aa3.66□□□□□ -1.82
CDC40YDR364C AAP1P37898 856 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C PFF1P38244 976 aa3.66□□□□□ -1.82
CDC40YDR364C OPY1P38271 328 aa3.66□□□□□ -1.82
CDC40YDR364C YJL206CP39529 758 aa3.66□□□□□ -1.82
CDC40YDR364C YMR147WP40218 223 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C SMK1P41808 388 aa3.66□□□□□ -1.82
CDC40YDR364C TEL2P53038 688 aa3.66□□□□□ -1.82
CDC40YDR364C EAF7P53911 425 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C GPD1Q00055 391 aaKnown RBP3.66□□□□□ -1.82
CDC40YDR364C SPC19Q03954 165 aa3.66□□□□□ -1.82
CDC40YDR364C CLF1Q12309 687 aaPredicted RBP3.66□□□□□ -1.82
CDC40YDR364C RPN13O13563 156 aa3.65□□□□□ -1.82
CDC40YDR364C CDC31P06704 161 aaKnown RBP3.65□□□□□ -1.82
CDC40YDR364C GLN4P13188 809 aaKnown RBP3.65□□□□□ -1.82
CDC40YDR364C HOP1P20050 605 aa3.65□□□□□ -1.82
CDC40YDR364C EMP70P32802 667 aa3.65□□□□□ -1.82
CDC40YDR364C SDS22P36047 338 aa3.65□□□□□ -1.82
CDC40YDR364C APM3P38153 483 aa3.65□□□□□ -1.82
CDC40YDR364C YEL020CP39994 560 aa3.65□□□□□ -1.82
CDC40YDR364C EAF5P39995 279 aa3.65□□□□□ -1.82
CDC40YDR364C CCT7P42943 550 aaKnown RBP3.65□□□□□ -1.82
CDC40YDR364C MEP3P53390 489 aa3.65□□□□□ -1.82
CDC40YDR364C RPT4P53549 437 aaKnown RBP3.65□□□□□ -1.82
CDC40YDR364C ERO1Q03103 563 aa3.65□□□□□ -1.82
CDC40YDR364C NRG1Q03125 231 aa3.65□□□□□ -1.82
CDC40YDR364C MUS81Q04149 632 aaPredicted RBP3.65□□□□□ -1.82
CDC40YDR364C UBX2Q04228 584 aa3.65□□□□□ -1.82
CDC40YDR364C MED1Q12321 566 aa3.65□□□□□ -1.82
CDC40YDR364C APM4Q99186 491 aa3.65□□□□□ -1.82
CDC40YDR364C YLR415CO13578 112 aa3.64□□□□□ -1.83
CDC40YDR364C NUC1P08466 329 aa3.64□□□□□ -1.83
CDC40YDR364C YUR1P26725 428 aa3.64□□□□□ -1.83
CDC40YDR364C IME2P32581 645 aa3.64□□□□□ -1.83
CDC40YDR364C ORC2P32833 620 aa3.64□□□□□ -1.83
CDC40YDR364C SLC1P33333 303 aa3.64□□□□□ -1.83
CDC40YDR364C HIS7P33734 552 aaKnown RBP3.64□□□□□ -1.83
CDC40YDR364C RRN3P36070 627 aa3.64□□□□□ -1.83
CDC40YDR364C YKR018CP36114 725 aa3.64□□□□□ -1.83
CDC40YDR364C BCD1P38772 366 aa3.64□□□□□ -1.83
CDC40YDR364C KAP123P40069 1113 aaKnown RBP3.64□□□□□ -1.83
CDC40YDR364C RAD26P40352 1085 aa3.64□□□□□ -1.83
CDC40YDR364C ESL1P40456 1118 aa3.64□□□□□ -1.83
CDC40YDR364C VID28P40547 921 aa3.64□□□□□ -1.83
CDC40YDR364C UBC11P52492 156 aa3.64□□□□□ -1.83
CDC40YDR364C PCL10P53124 433 aa3.64□□□□□ -1.83
CDC40YDR364C PIB2P53191 635 aa3.64□□□□□ -1.83
CDC40YDR364C IRC4Q03036 179 aa3.64□□□□□ -1.83
CDC40YDR364C HLR1Q04429 423 aa3.64□□□□□ -1.83
CDC40YDR364C NGL1Q08213 363 aaKnown RBP3.64□□□□□ -1.83
CDC40YDR364C DCS2Q12123 353 aa3.64□□□□□ -1.83
CDC40YDR364C HAL9Q12180 1030 aa3.64□□□□□ -1.83
CDC40YDR364C GRX6Q12438 231 aa3.64□□□□□ -1.83
CDC40YDR364C YLR149CQ99296 730 aa3.64□□□□□ -1.83
CDC40YDR364C UTP10P42945 1769 aaKnown RBP3.64□□□□□ -1.83
CDC40YDR364C RIM15P43565 1770 aa3.64□□□□□ -1.83
CDC40YDR364C OPI1P21957 404 aa3.63□□□□□ -1.83
CDC40YDR364C KRE2P27809 442 aa3.63□□□□□ -1.83
CDC40YDR364C DGR2P32330 852 aa3.63□□□□□ -1.83
CDC40YDR364C SPL2P38839 148 aa3.63□□□□□ -1.83
CDC40YDR364C DUN1P39009 513 aa3.63□□□□□ -1.83
CDC40YDR364C STL1P39932 569 aa3.63□□□□□ -1.83
CDC40YDR364C PZF1P39933 429 aa3.63□□□□□ -1.83
CDC40YDR364C SCS2P40075 244 aaKnown RBP3.63□□□□□ -1.83
CDC40YDR364C SPO22P40511 975 aa3.63□□□□□ -1.83
CDC40YDR364C GAT1P43574 510 aa3.63□□□□□ -1.83
CDC40YDR364C VTC2P43585 828 aa3.63□□□□□ -1.83
CDC40YDR364C IRC8P47046 822 aa3.63□□□□□ -1.83
CDC40YDR364C EAF6P47128 113 aa3.63□□□□□ -1.83
CDC40YDR364C YAP1802P53309 568 aa3.63□□□□□ -1.83
CDC40YDR364C YMR210WQ03649 449 aa3.63□□□□□ -1.83
CDC40YDR364C ASM4Q05166 528 aa3.63□□□□□ -1.83
CDC40YDR364C INM2Q05533 292 aa3.63□□□□□ -1.83
CDC40YDR364C PSF3Q12146 194 aa3.63□□□□□ -1.83
CDC40YDR364C ARP7Q12406 477 aa3.63□□□□□ -1.83
CDC40YDR364C SAN1P22470 610 aa3.63□□□□□ -1.83
CDC40YDR364C IMP2'P32351 346 aa3.63□□□□□ -1.83
CDC40YDR364C HXT4P32467 576 aa3.63□□□□□ -1.83
CDC40YDR364C RPT3P33298 428 aaKnown RBP3.63□□□□□ -1.83
CDC40YDR364C PTK1P36002 662 aaPredicted RBP3.63□□□□□ -1.83
CDC40YDR364C YHR202WP38887 602 aa3.63□□□□□ -1.83
CDC40YDR364C VPS8P39702 1274 aa3.63□□□□□ -1.83
CDC40YDR364C FAF1P40546 346 aaPredicted RBP3.63□□□□□ -1.83
CDC40YDR364C DJP1P40564 432 aa3.63□□□□□ -1.83
CDC40YDR364C MAD3P47074 515 aa3.63□□□□□ -1.83
CDC40YDR364C BNA1P47096 177 aa3.63□□□□□ -1.83
CDC40YDR364C NPA3P47122 385 aa3.63□□□□□ -1.83
CDC40YDR364C SCS3P53012 380 aa3.63□□□□□ -1.83
CDC40YDR364C ZIP2P53061 704 aa3.63□□□□□ -1.83
CDC40YDR364C DUS1P53759 423 aaKnown RBP3.63□□□□□ -1.83
CDC40YDR364C NOP15P53927 220 aaPredicted RBP3.63□□□□□ -1.83
CDC40YDR364C MRPL13Q02204 264 aa3.63□□□□□ -1.83
CDC40YDR364C EIS1Q05050 843 aaKnown RBP3.63□□□□□ -1.83
CDC40YDR364C CIA1Q05583 330 aa3.63□□□□□ -1.83
CDC40YDR364C TAH18Q12181 623 aa3.63□□□□□ -1.83
CDC40YDR364C LSP1Q12230 341 aaKnown RBP3.63□□□□□ -1.83
CDC40YDR364C ATG11Q12527 1178 aa3.63□□□□□ -1.83
CDC40YDR364C LAM4P38800 1345 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms