RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W TY2B-BQ12491 1770 aa3.25□□□□□ -1.89
SSF2YDR312W ADH4P10127 382 aa3.25□□□□□ -1.89
SSF2YDR312W SEC12P11655 471 aa3.25□□□□□ -1.89
SSF2YDR312W NIC96P34077 839 aa3.25□□□□□ -1.89
SSF2YDR312W TGL1P34163 548 aa3.25□□□□□ -1.89
SSF2YDR312W YPT10P38146 199 aa3.25□□□□□ -1.89
SSF2YDR312W STB5P38699 743 aa3.25□□□□□ -1.89
SSF2YDR312W SSP120P39931 234 aaKnown RBP3.25□□□□□ -1.89
SSF2YDR312W PUS4P48567 403 aaKnown RBP3.25□□□□□ -1.89
SSF2YDR312W CEG1Q01159 459 aaPredicted RBP3.25□□□□□ -1.89
SSF2YDR312W TGS1Q12052 315 aa3.25□□□□□ -1.89
SSF2YDR312W VAS1P07806 1104 aaKnown RBP3.24□□□□□ -1.89
SSF2YDR312W HEM1P09950 548 aaPredicted RBP3.24□□□□□ -1.89
SSF2YDR312W CBP3P21560 335 aa3.24□□□□□ -1.89
SSF2YDR312W LOT5P34234 306 aa3.24□□□□□ -1.89
SSF2YDR312W CCL1P37366 393 aa3.24□□□□□ -1.89
SSF2YDR312W ULP2P40537 1034 aaPredicted RBP3.24□□□□□ -1.89
SSF2YDR312W GSM1P42950 618 aa3.24□□□□□ -1.89
SSF2YDR312W ASK10P48361 1146 aa3.24□□□□□ -1.89
SSF2YDR312W SAP4P53036 818 aa3.24□□□□□ -1.89
SSF2YDR312W COS12P53053 380 aa3.24□□□□□ -1.89
SSF2YDR312W ORM2Q06144 216 aa3.24□□□□□ -1.89
SSF2YDR312W IRC3Q06683 689 aa3.24□□□□□ -1.89
SSF2YDR312W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SSF2YDR312W TRM3Q07527 1436 aa3.23□□□□□ -1.89
SSF2YDR312W SMC4Q12267 1418 aa3.23□□□□□ -1.89
SSF2YDR312W YMR084WA2P2R3 262 aa3.23□□□□□ -1.89
SSF2YDR312W AQY1P0CD91 305 aa3.23□□□□□ -1.89
SSF2YDR312W SST2P11972 698 aaKnown RBP3.23□□□□□ -1.89
SSF2YDR312W RPC34P32910 317 aa3.23□□□□□ -1.89
SSF2YDR312W SAW1P39735 261 aa3.23□□□□□ -1.89
SSF2YDR312W IMA5P40884 581 aa3.23□□□□□ -1.89
SSF2YDR312W ACS1Q01574 713 aa3.23□□□□□ -1.89
SSF2YDR312W TRI1Q05024 226 aa3.23□□□□□ -1.89
SSF2YDR312W BET2P20133 325 aa3.22□□□□□ -1.89
SSF2YDR312W RNR3P21672 869 aaKnown RBP3.22□□□□□ -1.89
SSF2YDR312W SDS22P36047 338 aa3.22□□□□□ -1.89
SSF2YDR312W SWD1P39706 426 aa3.22□□□□□ -1.89
SSF2YDR312W EXO1P39875 702 aa3.22□□□□□ -1.89
SSF2YDR312W PSA1P41940 361 aaKnown RBP3.22□□□□□ -1.89
SSF2YDR312W YFL015CP43578 164 aa3.22□□□□□ -1.89
SSF2YDR312W ATP23P53722 227 aa3.22□□□□□ -1.89
SSF2YDR312W GFD1Q04839 188 aaKnown RBP3.22□□□□□ -1.89
SSF2YDR312W RGT2Q12300 763 aa3.22□□□□□ -1.89
SSF2YDR312W FRE7Q12333 620 aa3.22□□□□□ -1.89
SSF2YDR312W TY1B-DR3Q99231 1755 aa3.22□□□□□ -1.89
SSF2YDR312W VTH1P40438 1549 aa3.21□□□□□ -1.9
SSF2YDR312W VTH2P40890 1549 aa3.21□□□□□ -1.9
SSF2YDR312W GAL1P04385 528 aa3.21□□□□□ -1.9
SSF2YDR312W YPK1P12688 680 aaKnown RBP3.21□□□□□ -1.9
SSF2YDR312W MRPL9P31334 269 aa3.21□□□□□ -1.9
SSF2YDR312W BEM3P32873 1128 aa3.21□□□□□ -1.9
SSF2YDR312W APD1P38281 316 aa3.21□□□□□ -1.9
SSF2YDR312W YJL043WP47053 257 aa3.21□□□□□ -1.9
SSF2YDR312W STP1Q00947 519 aa3.21□□□□□ -1.9
SSF2YDR312W MET14Q02196 202 aa3.21□□□□□ -1.9
SSF2YDR312W ENT2Q05785 613 aa3.21□□□□□ -1.9
SSF2YDR312W YOL114CQ12322 202 aa3.21□□□□□ -1.9
SSF2YDR312W ARP7Q12406 477 aa3.21□□□□□ -1.9
SSF2YDR312W IQG1Q12280 1495 aa3.21□□□□□ -1.9
SSF2YDR312W PDR10P51533 1564 aa3.21□□□□□ -1.9
SSF2YDR312W DOP1Q03921 1698 aa3.2□□□□□ -1.9
SSF2YDR312W SEC3P33332 1336 aaKnown RBP3.2□□□□□ -1.9
SSF2YDR312W PRP45P28004 379 aaPredicted RBP3.2□□□□□ -1.9
SSF2YDR312W PRE2P30656 287 aaKnown RBP3.2□□□□□ -1.9
SSF2YDR312W CDC5P32562 705 aa3.2□□□□□ -1.9
SSF2YDR312W TAF5P38129 798 aa3.2□□□□□ -1.9
SSF2YDR312W SDH8P38345 138 aa3.2□□□□□ -1.9
SSF2YDR312W POL31P46957 487 aa3.2□□□□□ -1.9
SSF2YDR312W NMD5P46970 1048 aa3.2□□□□□ -1.9
SSF2YDR312W MAD3P47074 515 aa3.2□□□□□ -1.9
SSF2YDR312W YNL092WP53934 400 aa3.2□□□□□ -1.9
SSF2YDR312W TRS31Q03337 283 aa3.2□□□□□ -1.9
SSF2YDR312W IOC4Q04213 475 aa3.2□□□□□ -1.9
SSF2YDR312W PCL8Q08966 492 aa3.2□□□□□ -1.9
SSF2YDR312W TY1B-JR2P47100 1755 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W TY1B-ER2Q03619 1755 aa3.19□□□□□ -1.9
SSF2YDR312W TY1B-MR1Q04214 1755 aa3.19□□□□□ -1.9
SSF2YDR312W TY1B-MR2Q04670 1755 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W TY1B-LR1Q12088 1755 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W TY1B-NL1Q12112 1755 aa3.19□□□□□ -1.9
SSF2YDR312W TY1B-GR1Q12141 1755 aa3.19□□□□□ -1.9
SSF2YDR312W TY1B-BLQ12490 1755 aa3.19□□□□□ -1.9
SSF2YDR312W ARO1P08566 1588 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W MYO4P32492 1471 aa3.19□□□□□ -1.9
SSF2YDR312W NUP157P40064 1391 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W AAC1P04710 309 aa3.19□□□□□ -1.9
SSF2YDR312W RPS7AP26786 190 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W GSY2P27472 705 aa3.19□□□□□ -1.9
SSF2YDR312W YLF2P38746 405 aa3.19□□□□□ -1.9
SSF2YDR312W RRP8P38961 392 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W VFA1P40080 203 aa3.19□□□□□ -1.9
SSF2YDR312W OPT1P40897 799 aa3.19□□□□□ -1.9
SSF2YDR312W BST1P43571 1029 aa3.19□□□□□ -1.9
SSF2YDR312W IDS2P46958 469 aa3.19□□□□□ -1.9
SSF2YDR312W MOT3P54785 490 aaKnown RBP3.19□□□□□ -1.9
SSF2YDR312W WAR1Q03631 944 aa3.19□□□□□ -1.9
SSF2YDR312W AAD4Q07747 329 aa3.19□□□□□ -1.9
SSF2YDR312W YOL057WQ08225 711 aa3.19□□□□□ -1.9
SSF2YDR312W ULS1Q08562 1619 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms