RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YIL166CP40445 542 aa3.78□□□□□ -1.8
RRP42YDL111C RFX1P48743 811 aa3.78□□□□□ -1.8
RRP42YDL111C YGR054WP53235 642 aaKnown RBP3.78□□□□□ -1.8
RRP42YDL111C NBP2Q12163 236 aa3.78□□□□□ -1.8
RRP42YDL111C ZRT2Q12436 422 aa3.78□□□□□ -1.8
RRP42YDL111C ERP4Q12450 207 aa3.78□□□□□ -1.8
RRP42YDL111C FOB1O13329 566 aa3.77□□□□□ -1.81
RRP42YDL111C PET122P10355 254 aa3.77□□□□□ -1.81
RRP42YDL111C AAC3P18238 307 aa3.77□□□□□ -1.81
RRP42YDL111C RPS7AP26786 190 aaKnown RBP3.77□□□□□ -1.81
RRP42YDL111C CAP1P28495 268 aaKnown RBP3.77□□□□□ -1.81
RRP42YDL111C FLO10P36170 1169 aa3.77□□□□□ -1.81
RRP42YDL111C CTP1P38152 299 aa3.77□□□□□ -1.81
RRP42YDL111C CBR1P38626 284 aaKnown RBP3.77□□□□□ -1.81
RRP42YDL111C YEL068CP39977 110 aa3.77□□□□□ -1.81
RRP42YDL111C IST3P40565 148 aaPredicted RBP3.77□□□□□ -1.81
RRP42YDL111C IDS2P46958 469 aa3.77□□□□□ -1.81
RRP42YDL111C MPS3P47069 682 aa3.77□□□□□ -1.81
RRP42YDL111C COS12P53053 380 aa3.77□□□□□ -1.81
RRP42YDL111C YAP1802P53309 568 aa3.77□□□□□ -1.81
RRP42YDL111C BSC5P53755 489 aa3.77□□□□□ -1.81
RRP42YDL111C SMX3P54999 86 aaPredicted RBP3.77□□□□□ -1.81
RRP42YDL111C TIM50Q02776 476 aa3.77□□□□□ -1.81
RRP42YDL111C SNO4Q04902 237 aa3.77□□□□□ -1.81
RRP42YDL111C HOF1Q05080 669 aa3.77□□□□□ -1.81
RRP42YDL111C ARO10Q06408 635 aa3.77□□□□□ -1.81
RRP42YDL111C VAM6Q07468 1049 aa3.77□□□□□ -1.81
RRP42YDL111C IZH3Q07959 543 aa3.77□□□□□ -1.81
RRP42YDL111C HSP33Q08914 237 aaKnown RBP3.77□□□□□ -1.81
RRP42YDL111C HSP32Q08992 237 aa3.77□□□□□ -1.81
RRP42YDL111C SUL2Q12325 893 aa3.77□□□□□ -1.81
RRP42YDL111C YNL162W-AQ3E7A8 72 aa3.77□□□□□ -1.81
RRP42YDL111C YKL033W-AQ86ZR7 236 aa3.77□□□□□ -1.81
RRP42YDL111C ABF1P14164 731 aa3.76□□□□□ -1.81
RRP42YDL111C DMC1P25453 334 aa3.76□□□□□ -1.81
RRP42YDL111C CMK1P27466 446 aaKnown RBP3.76□□□□□ -1.81
RRP42YDL111C GCD7P32502 381 aaPredicted RBP3.76□□□□□ -1.81
RRP42YDL111C SAC6P32599 642 aaKnown RBP3.76□□□□□ -1.81
RRP42YDL111C NFU1P32860 256 aa3.76□□□□□ -1.81
RRP42YDL111C NUP120P35729 1037 aa3.76□□□□□ -1.81
RRP42YDL111C KHA1P40309 873 aa3.76□□□□□ -1.81
RRP42YDL111C SGM1P47166 707 aa3.76□□□□□ -1.81
RRP42YDL111C PAN2P53010 1115 aaPredicted RBP3.76□□□□□ -1.81
RRP42YDL111C CSL4P53859 292 aaPredicted RBP3.76□□□□□ -1.81
RRP42YDL111C YKU80Q04437 629 aa3.76□□□□□ -1.81
RRP42YDL111C RCO1Q04779 684 aa3.76□□□□□ -1.81
RRP42YDL111C RGC1Q06108 1083 aaKnown RBP3.76□□□□□ -1.81
RRP42YDL111C ICL2Q12031 575 aa3.76□□□□□ -1.81
RRP42YDL111C COX17Q12287 69 aa3.76□□□□□ -1.81
RRP42YDL111C TAF3Q12297 353 aa3.76□□□□□ -1.81
RRP42YDL111C SKM1Q12469 655 aa3.76□□□□□ -1.81
RRP42YDL111C TY2A-LR1P0C2J4 438 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-FP0CX61 438 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-GR2P0CX62 438 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-CP25383 438 aa3.75□□□□□ -1.81
RRP42YDL111C ADY2P25613 283 aa3.75□□□□□ -1.81
RRP42YDL111C YCR061WP25639 631 aa3.75□□□□□ -1.81
RRP42YDL111C PRE2P30656 287 aaKnown RBP3.75□□□□□ -1.81
RRP42YDL111C STB5P38699 743 aa3.75□□□□□ -1.81
RRP42YDL111C HRB1P38922 454 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
RRP42YDL111C YJR061WP40355 935 aa3.75□□□□□ -1.81
RRP42YDL111C SKP2P42843 763 aa3.75□□□□□ -1.81
RRP42YDL111C CCT7P42943 550 aaKnown RBP3.75□□□□□ -1.81
RRP42YDL111C ARC1P46672 376 aaKnown RBP3.75□□□□□ -1.81
RRP42YDL111C SIP4P46954 829 aa3.75□□□□□ -1.81
RRP42YDL111C ZAP1P47043 880 aa3.75□□□□□ -1.81
RRP42YDL111C FHN1P53279 174 aa3.75□□□□□ -1.81
RRP42YDL111C RBG2P53295 368 aaKnown RBP3.75□□□□□ -1.81
RRP42YDL111C TY2A-DR2Q03483 438 aa3.75□□□□□ -1.81
RRP42YDL111C YSH1Q06224 779 aaPredicted RBP3.75□□□□□ -1.81
RRP42YDL111C AFT2Q08957 416 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-BQ12260 438 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-OR2Q12293 438 aa3.75□□□□□ -1.81
RRP42YDL111C SCM3Q12334 223 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-DR1Q12392 438 aa3.75□□□□□ -1.81
RRP42YDL111C TY2A-OR1Q12439 438 aa3.75□□□□□ -1.81
RRP42YDL111C RVB2Q12464 471 aaKnown RBP3.75□□□□□ -1.81
RRP42YDL111C TY2A-DR3Q99303 438 aa3.75□□□□□ -1.81
RRP42YDL111C YLR302CO13544 120 aa3.74□□□□□ -1.81
RRP42YDL111C RPB2P08518 1224 aaKnown RBP3.74□□□□□ -1.81
RRP42YDL111C MET8P15807 274 aa3.74□□□□□ -1.81
RRP42YDL111C SPO16P17122 198 aa3.74□□□□□ -1.81
RRP42YDL111C MDM10P18409 493 aa3.74□□□□□ -1.81
RRP42YDL111C FUB1P25659 250 aa3.74□□□□□ -1.81
RRP42YDL111C PHO11P35842 467 aa3.74□□□□□ -1.81
RRP42YDL111C MRPL7P36519 292 aa3.74□□□□□ -1.81
RRP42YDL111C PHO12P38693 467 aa3.74□□□□□ -1.81
RRP42YDL111C YJL206CP39529 758 aa3.74□□□□□ -1.81
RRP42YDL111C ARB1P40024 610 aaKnown RBP3.74□□□□□ -1.81
RRP42YDL111C VTC2P43585 828 aa3.74□□□□□ -1.81
RRP42YDL111C IRC6P43615 237 aa3.74□□□□□ -1.81
RRP42YDL111C ASE1P50275 885 aa3.74□□□□□ -1.81
RRP42YDL111C VPS4P52917 437 aa3.74□□□□□ -1.81
RRP42YDL111C COG1P53079 417 aa3.74□□□□□ -1.81
RRP42YDL111C EFR3Q03653 782 aaKnown RBP3.74□□□□□ -1.81
RRP42YDL111C USA1Q03714 838 aa3.74□□□□□ -1.81
RRP42YDL111C TDA9Q04545 1251 aa3.74□□□□□ -1.81
RRP42YDL111C TAH18Q12181 623 aa3.74□□□□□ -1.81
RRP42YDL111C ATP2P00830 511 aaKnown RBP3.73□□□□□ -1.81
RRP42YDL111C RPL19AP0CX82 189 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms