RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	MAK32	P23060	363 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	PRP45	P28004	379 aa	Predicted RBP	5.04	□□□□□ -1.6
RTG3	YBL103C	FTH1	P38310	465 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	RRP8	P38961	392 aa	Known RBP	5.04	□□□□□ -1.6
RTG3	YBL103C	YIL024C	P40543	189 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	SCW4	P53334	386 aa	Known RBP	5.04	□□□□□ -1.6
RTG3	YBL103C	SNU56	Q03782	492 aa	Known RBP	5.04	□□□□□ -1.6
RTG3	YBL103C	PLM2	Q04383	521 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	TRI1	Q05024	226 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	YDL242W	Q07746	117 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	YER175W-A	Q8TGU4	54 aa		5.04	□□□□□ -1.6
RTG3	YBL103C	VAS1	P07806	1104 aa	Known RBP	5.03	□□□□□ -1.6
RTG3	YBL103C	YCR061W	P25639	631 aa		5.03	□□□□□ -1.6
RTG3	YBL103C	CIR1	P42940	261 aa		5.03	□□□□□ -1.6
RTG3	YBL103C	ADH4	P10127	382 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	RPS7A	P26786	190 aa	Known RBP	5.02	□□□□□ -1.61
RTG3	YBL103C	PCI8	P40512	444 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	POL31	P46957	487 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	SCS3	P53012	380 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	CRF1	Q04930	467 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	YOR389W	Q08912	624 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	AIM44	Q99299	758 aa		5.02	□□□□□ -1.61
RTG3	YBL103C	CET1	O13297	549 aa	Predicted RBP	5.01	□□□□□ -1.61
RTG3	YBL103C	CTT1	P06115	562 aa		5.01	□□□□□ -1.61
RTG3	YBL103C	ARB1	P40024	610 aa	Known RBP	5.01	□□□□□ -1.61
RTG3	YBL103C	CIN1	P40987	1014 aa		5.01	□□□□□ -1.61
RTG3	YBL103C	COP1	P53622	1201 aa	Known RBP	5.01	□□□□□ -1.61
RTG3	YBL103C	YNL058C	P53947	316 aa		5.01	□□□□□ -1.61
RTG3	YBL103C	HER1	Q12276	1246 aa		5.01	□□□□□ -1.61
RTG3	YBL103C	COQ3	P27680	312 aa		5	□□□□□ -1.61
RTG3	YBL103C	KES1	P35844	434 aa	Known RBP	5	□□□□□ -1.61
RTG3	YBL103C	FLO5	P38894	1075 aa		5	□□□□□ -1.61
RTG3	YBL103C	SAW1	P39735	261 aa		5	□□□□□ -1.61
RTG3	YBL103C	IMA5	P40884	581 aa		5	□□□□□ -1.61
RTG3	YBL103C	RAD34	Q06665	692 aa		5	□□□□□ -1.61
RTG3	YBL103C	YPR089W	O13585	888 aa		5	□□□□□ -1.61
RTG3	YBL103C	MRC1	P25588	1096 aa		5	□□□□□ -1.61
RTG3	YBL103C	ASK1	P35734	292 aa		5	□□□□□ -1.61
RTG3	YBL103C	TAF5	P38129	798 aa		5	□□□□□ -1.61
RTG3	YBL103C	IRC8	P47046	822 aa		5	□□□□□ -1.61
RTG3	YBL103C	PUS4	P48567	403 aa	Known RBP	5	□□□□□ -1.61
RTG3	YBL103C	YNL034W	P53963	612 aa		5	□□□□□ -1.61
RTG3	YBL103C	AAT1	Q01802	451 aa		5	□□□□□ -1.61
RTG3	YBL103C	YER190C-B	P0CX94	160 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	YEL077W-A	P0CX95	160 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	YGR296C-B	P0CX96	160 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	YPL283W-B	P0CX97	160 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	YPR204C-A	P0CX98	160 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	SDS22	P36047	338 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	SPC97	P38863	823 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	RAD26	P40352	1085 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	CFD1	P40558	293 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	CNM67	P53865	581 aa	Known RBP	4.99	□□□□□ -1.61
RTG3	YBL103C	TDA9	Q04545	1251 aa		4.99	□□□□□ -1.61
RTG3	YBL103C	KGD2	P19262	463 aa	Predicted RBP	4.98	□□□□□ -1.61
RTG3	YBL103C	SWD1	P39706	426 aa		4.98	□□□□□ -1.61
RTG3	YBL103C	LYS21	Q12122	440 aa	Known RBP	4.98	□□□□□ -1.61
RTG3	YBL103C	SES1	P07284	462 aa	Known RBP	4.97	□□□□□ -1.61
RTG3	YBL103C	ILS1	P09436	1072 aa	Known RBP	4.97	□□□□□ -1.61
RTG3	YBL103C	YMR124W	P39523	943 aa	Known RBP	4.97	□□□□□ -1.61
RTG3	YBL103C	ASK10	P48361	1146 aa		4.97	□□□□□ -1.61
RTG3	YBL103C	GAL4	P04386	881 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	SSB1	P11484	613 aa	Known RBP	4.96	□□□□□ -1.62
RTG3	YBL103C	YLF2	P38746	405 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	ERV46	P39727	415 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	SSB2	P40150	613 aa	Known RBP	4.96	□□□□□ -1.62
RTG3	YBL103C	VPS64	Q03944	604 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	CRD1	Q07560	283 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	AAD4	Q07747	329 aa		4.96	□□□□□ -1.62
RTG3	YBL103C	NOP2	P40991	618 aa	Known RBP	4.95	□□□□□ -1.62
RTG3	YBL103C	YAT1	P80235	687 aa		4.95	□□□□□ -1.62
RTG3	YBL103C	CEG1	Q01159	459 aa	Predicted RBP	4.95	□□□□□ -1.62
RTG3	YBL103C	PFA4	Q12006	378 aa		4.95	□□□□□ -1.62
RTG3	YBL103C	MGM1	P32266	881 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	VBA2	P38358	474 aa	Known RBP	4.94	□□□□□ -1.62
RTG3	YBL103C	ESF2	P53743	316 aa	Known RBP	4.94	□□□□□ -1.62
RTG3	YBL103C	RPL15B	P54780	204 aa	Predicted RBP	4.94	□□□□□ -1.62
RTG3	YBL103C	MRPL1	Q04599	285 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	AIM6	Q07716	390 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	YUR1	P26725	428 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	RPT3	P33298	428 aa	Known RBP	4.94	□□□□□ -1.62
RTG3	YBL103C	TGL2	P54857	326 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	YPL191C	Q08930	360 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	ICL2	Q12031	575 aa		4.94	□□□□□ -1.62
RTG3	YBL103C	YCP4	P25349	247 aa	Known RBP	4.93	□□□□□ -1.62
RTG3	YBL103C	GSH1	P32477	678 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	SIP1	P32578	815 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	RPF2	P36160	344 aa	Known RBP	4.93	□□□□□ -1.62
RTG3	YBL103C	PXL1	P36166	706 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	ERC1	P38767	581 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	UBP7	P40453	1071 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	ARA2	Q04212	335 aa		4.93	□□□□□ -1.62
RTG3	YBL103C	GET3	Q12154	354 aa	Known RBP	4.93	□□□□□ -1.62
RTG3	YBL103C	YPT1	P01123	206 aa	Known RBP	4.92	□□□□□ -1.62
RTG3	YBL103C	ILV2	P07342	687 aa	Known RBP	4.92	□□□□□ -1.62
RTG3	YBL103C	SND1	Q04007	877 aa		4.92	□□□□□ -1.62
RTG3	YBL103C	ARP7	Q12406	477 aa		4.92	□□□□□ -1.62
RTG3	YBL103C	PTC6	P25646	442 aa		4.91	□□□□□ -1.62
RTG3	YBL103C	MEP2	P41948	499 aa		4.91	□□□□□ -1.62
RTG3	YBL103C	MAD3	P47074	515 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms