RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	YLH47	Q06493	454 aa		5.39	□□□□□ -1.55
ECM1	YAL059W	CSR1	Q06705	408 aa	Known RBP	5.39	□□□□□ -1.55
ECM1	YAL059W	APL4	Q12028	832 aa		5.39	□□□□□ -1.55
ECM1	YAL059W	RTN2	Q12443	393 aa		5.39	□□□□□ -1.55
ECM1	YAL059W	ADH4	P10127	382 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	MCM3	P24279	971 aa	Known RBP	5.38	□□□□□ -1.55
ECM1	YAL059W	ROX1	P25042	368 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	SMI1	P32566	505 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	TEF4	P36008	412 aa	Known RBP	5.38	□□□□□ -1.55
ECM1	YAL059W	ESL2	P36168	1195 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	MRPL36	P36531	177 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	RFC1	P38630	861 aa	Known RBP	5.38	□□□□□ -1.55
ECM1	YAL059W	YHR112C	P38716	378 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	STL1	P39932	569 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YEL025C	P39991	1188 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	LTP1	P40347	161 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YJL163C	P46996	555 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	ART5	P53244	586 aa	Known RBP	5.38	□□□□□ -1.55
ECM1	YAL059W	ADA2	Q02336	434 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YMR206W	Q03695	313 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YLR345W	Q06137	509 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YPR172W	Q06608	200 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	MCM21	Q06675	368 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	RRP36	Q12481	300 aa	Predicted RBP	5.38	□□□□□ -1.55
ECM1	YAL059W	ATG11	Q12527	1178 aa		5.38	□□□□□ -1.55
ECM1	YAL059W	YMR084W	A2P2R3	262 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	MIS1	P09440	975 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	CBP3	P21560	335 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	STE50	P25344	346 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	CBF2	P32504	956 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	RMA1	P36001	430 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	APT2	P36973	181 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	PPS1	P38148	807 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	SWD1	P39706	426 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	PUS4	P48567	403 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	SHE10	P53075	577 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	NNF2	P53253	936 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	LEE1	Q02799	301 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	GYL1	Q04322	720 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	DPB4	Q04603	196 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	AIM32	Q04689	311 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	MLH2	Q07980	695 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	IRC13	Q08630	104 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	PDH1	Q12428	516 aa	Known RBP	5.37	□□□□□ -1.55
ECM1	YAL059W	ZRT2	Q12436	422 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	SKM1	Q12469	655 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	FRE6	Q12473	712 aa		5.37	□□□□□ -1.55
ECM1	YAL059W	VAS1	P07806	1104 aa	Known RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	THR1	P17423	357 aa	Known RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	BET2	P20133	325 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	RAD51	P25454	400 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	PUP2	P32379	260 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	TFB1	P32776	642 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	OGG1	P53397	376 aa	Predicted RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	BRE5	P53741	515 aa	Known RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	BSC5	P53755	489 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	ALF1	P53904	254 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	MUK1	Q02866	612 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	YML119W	Q03208	357 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	CWC21	Q03375	135 aa	Known RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	TFC6	Q06339	672 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	NGL1	Q08213	363 aa	Known RBP	5.36	□□□□□ -1.55
ECM1	YAL059W	HUA2	Q12134	243 aa		5.36	□□□□□ -1.55
ECM1	YAL059W	SEC53	P07283	254 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	POL3	P15436	1097 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	RRP7	P25368	297 aa	Predicted RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	DAL80	P26343	269 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	HXT4	P32467	576 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	SAC6	P32599	642 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	LAS1	P36146	502 aa	Predicted RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	APE3	P37302	537 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	TAF5	P38129	798 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	MOH1	P38191	138 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	SRP68	P38687	599 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	RTS1	P38903	757 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
ECM1	YAL059W	STT3	P39007	718 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	PRM2	P40534	656 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	BAP3	P41815	604 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	CCT7	P42943	550 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	MNP1	P53163	194 aa	Predicted RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	DUO1	P53168	247 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	MTL1	P53214	551 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	EOS1	P53938	366 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	MTD1	Q02046	320 aa	Known RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	OAZ1	Q02803	292 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	ARP9	Q05123	467 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	KEL3	Q08979	651 aa	Predicted RBP	5.35	□□□□□ -1.55
ECM1	YAL059W	PCD1	Q12524	340 aa		5.35	□□□□□ -1.55
ECM1	YAL059W	CPA2	P03965	1118 aa	Known RBP	5.34	□□□□□ -1.55
ECM1	YAL059W	LCB1	P25045	558 aa	Known RBP	5.34	□□□□□ -1.55
ECM1	YAL059W	POL4	P25615	582 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	ADK2	P26364	225 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	SWC3	P31376	625 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	MGM1	P32266	881 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	PPQ1	P32945	549 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	OAR1	P35731	278 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	UIP5	P36137	443 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	APN2	P38207	520 aa		5.34	□□□□□ -1.55
ECM1	YAL059W	YBR138C	P38277	524 aa		5.34	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 102.7 ms