RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ARID4AP29374 1257 aaPredicted RBP23.35■■□□□ 1.33
SMN2-215ENST00000628696 MCAMP43121 646 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 FXR1P51114 621 aaKnown RBP eCLIP23.35■■□□□ 1.33
SMN2-215ENST00000628696 TREML2Q5T2D2 321 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 TEX11Q8IYF3 940 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 ANKRD13CQ8N6S4 541 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 NOL10Q9BSC4 688 aaKnown RBP23.35■■□□□ 1.33
SMN2-215ENST00000628696 OSBPL5Q9H0X9 879 aaPredicted RBP23.35■■□□□ 1.33
SMN2-215ENST00000628696 UNC93B1Q9H1C4 597 aa23.35■■□□□ 1.33
SMN2-215ENST00000628696 ATAD5Q96QE3 1844 aa23.34■■□□□ 1.33
SMN2-215ENST00000628696 SPP2Q13103 211 aa23.34■■□□□ 1.33
SMN2-215ENST00000628696 U2AF1L4Q8WU68 220 aaKnown RBP23.34■■□□□ 1.33
SMN2-215ENST00000628696 SNRKQ9NRH2 765 aa23.33■■□□□ 1.33
SMN2-215ENST00000628696 PNMA3Q9UL41 463 aa23.33■■□□□ 1.33
SMN2-215ENST00000628696 TRIOBPQ9H2D6 2365 aa23.32■■□□□ 1.32
SMN2-215ENST00000628696 OS9Q13438 667 aaPredicted RBP23.32■■□□□ 1.32
SMN2-215ENST00000628696 TTC39AQ5SRH9 613 aa23.32■■□□□ 1.32
SMN2-215ENST00000628696 ZNF280CQ8ND82 737 aa23.32■■□□□ 1.32
SMN2-215ENST00000628696 SH3RF3Q8TEJ3 882 aaPredicted RBP23.32■■□□□ 1.32
SMN2-215ENST00000628696 COA7Q96BR5 231 aa23.32■■□□□ 1.32
SMN2-215ENST00000628696 HTATIP2Q9BUP3 242 aa23.32■■□□□ 1.32
SMN2-215ENST00000628696 INHAP05111 366 aa23.31■■□□□ 1.32
SMN2-215ENST00000628696 CAP2P40123 477 aa23.31■■□□□ 1.32
SMN2-215ENST00000628696 HMGCS2P54868 508 aa23.31■■□□□ 1.32
SMN2-215ENST00000628696 RRP1BQ14684 758 aaKnown RBP23.31■■□□□ 1.32
SMN2-215ENST00000628696 CHRDL2Q6WN34 429 aa23.31■■□□□ 1.32
SMN2-215ENST00000628696 TMEM57Q8N5G2 664 aa23.31■■□□□ 1.32
SMN2-215ENST00000628696 PROCA1Q8NCQ7 364 aaPredicted RBP23.31■■□□□ 1.32
SMN2-215ENST00000628696 AATFQ9NY61 560 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMN2-215ENST00000628696 USP17L5A8MUK1 530 aa23.3■■□□□ 1.32
SMN2-215ENST00000628696 FARP2O94887 1054 aaPredicted RBP23.3■■□□□ 1.32
SMN2-215ENST00000628696 SGPL1O95470 568 aa23.3■■□□□ 1.32
SMN2-215ENST00000628696 IRF5Q13568 498 aa23.3■■□□□ 1.32
SMN2-215ENST00000628696 NAA16Q6N069 864 aaPredicted RBP23.3■■□□□ 1.32
SMN2-215ENST00000628696 PXYLP1Q8TE99 480 aa23.3■■□□□ 1.32
SMN2-215ENST00000628696 COL2A1P02458 1487 aaPredicted RBP23.3■■□□□ 1.32
SMN2-215ENST00000628696 BAG3O95817 575 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 TFRCP02786 760 aaKnown RBP23.29■■□□□ 1.32
SMN2-215ENST00000628696 PABPC4Q13310 644 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMN2-215ENST00000628696 FAM110CQ1W6H9 321 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 CCDC158Q5M9N0 1113 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 UBE2Q1Q7Z7E8 422 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 DBNDD2Q9BQY9 259 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 TBC1D2Q9BYX2 928 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 PI4KBQ9UBF8 816 aa23.29■■□□□ 1.32
SMN2-215ENST00000628696 HERC5Q9UII4 1024 aaKnown RBP23.29■■□□□ 1.32
SMN2-215ENST00000628696 TNNI3KQ59H18 835 aa23.28■■□□□ 1.32
SMN2-215ENST00000628696 ZKSCAN2Q63HK3 967 aa23.28■■□□□ 1.32
SMN2-215ENST00000628696 DEFB118Q96PH6 123 aa23.28■■□□□ 1.32
SMN2-215ENST00000628696 AS3MTQ9HBK9 375 aa23.28■■□□□ 1.32
SMN2-215ENST00000628696 FPGT-TNNI3KV9GXZ4 949 aa23.28■■□□□ 1.32
SMN2-215ENST00000628696 MYO5AQ9Y4I1 1855 aaKnown RBP23.28■■□□□ 1.32
SMN2-215ENST00000628696 LOC285556D6RIA3 1793 aa23.27■■□□□ 1.32
SMN2-215ENST00000628696 GCLCP48506 637 aaPredicted RBP23.27■■□□□ 1.32
SMN2-215ENST00000628696 MAPKAPK5Q8IW41 473 aa23.27■■□□□ 1.32
SMN2-215ENST00000628696 TGFBRAP1Q8WUH2 860 aa23.27■■□□□ 1.32
SMN2-215ENST00000628696 GPR108Q9NPR9 543 aa23.27■■□□□ 1.32
SMN2-215ENST00000628696 NR2E3Q9Y5X4 410 aa23.27■■□□□ 1.32
SMN2-215ENST00000628696 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
SMN2-215ENST00000628696 PLCG2P16885 1265 aa23.26■■□□□ 1.31
SMN2-215ENST00000628696 ATP8B2P98198 1209 aa23.26■■□□□ 1.31
SMN2-215ENST00000628696 TRIM34Q9BYJ4 488 aa23.26■■□□□ 1.31
SMN2-215ENST00000628696 ASCC2Q9H1I8 757 aaPredicted RBP23.26■■□□□ 1.31
SMN2-215ENST00000628696 DHX36Q9H2U1 1008 aaKnown RBP23.26■■□□□ 1.31
SMN2-215ENST00000628696 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
SMN2-215ENST00000628696 POLA2Q14181 598 aa23.25■■□□□ 1.31
SMN2-215ENST00000628696 CRACR2BQ8N4Y2 399 aaPredicted RBP23.25■■□□□ 1.31
SMN2-215ENST00000628696 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
SMN2-215ENST00000628696 RBM27Q9P2N5 1060 aaKnown RBP23.25■■□□□ 1.31
SMN2-215ENST00000628696 CDK5RAP2Q96SN8 1893 aa23.25■■□□□ 1.31
SMN2-215ENST00000628696 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
SMN2-215ENST00000628696 PPP4CP60510 307 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 MTMR2Q13614 643 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 SH3D19Q5HYK7 790 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 ADGRA1Q86SQ6 560 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 TMOD4Q9NZQ9 345 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 MAST2Q6P0Q8 1798 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 SIPA1L1O43166 1804 aa23.24■■□□□ 1.31
SMN2-215ENST00000628696 ASNSP08243 561 aa23.23■■□□□ 1.31
SMN2-215ENST00000628696 ZAP70P43403 619 aa23.23■■□□□ 1.31
SMN2-215ENST00000628696 FOXP4Q8IVH2 680 aaPredicted RBP23.23■■□□□ 1.31
SMN2-215ENST00000628696 SAP30BPQ9UHR5 308 aaKnown RBP23.23■■□□□ 1.31
SMN2-215ENST00000628696 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
SMN2-215ENST00000628696 FLT1P17948 1338 aa23.23■■□□□ 1.31
SMN2-215ENST00000628696 BACE1P56817 501 aa23.22■■□□□ 1.31
SMN2-215ENST00000628696 IRX3P78415 501 aaPredicted RBP23.22■■□□□ 1.31
SMN2-215ENST00000628696 FTSJ3Q8IY81 847 aaKnown RBP23.22■■□□□ 1.31
SMN2-215ENST00000628696 WDR18Q9BV38 432 aa23.22■■□□□ 1.31
SMN2-215ENST00000628696 PIH1D3Q9NQM4 214 aaKnown RBP23.22■■□□□ 1.31
SMN2-215ENST00000628696 PAK6Q9NQU5 681 aaPredicted RBP23.22■■□□□ 1.31
SMN2-215ENST00000628696 ZBTB7BO15156 539 aaPredicted RBP23.21■■□□□ 1.31
SMN2-215ENST00000628696 EVI5O60447 810 aa23.21■■□□□ 1.31
SMN2-215ENST00000628696 GDF11O95390 407 aa23.21■■□□□ 1.31
SMN2-215ENST00000628696 JAG1P78504 1218 aa23.21■■□□□ 1.31
SMN2-215ENST00000628696 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMN2-215ENST00000628696 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
SMN2-215ENST00000628696 FOCADQ5VW36 1801 aa23.21■■□□□ 1.31
SMN2-215ENST00000628696 CAPN2P17655 700 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 CYP7A1P22680 504 aa23.2■■□□□ 1.3
SMN2-215ENST00000628696 DYNLL1P63167 89 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms