RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 COL2A1P02458 1487 aaPredicted RBP13.19□□□□□ -0.3
SSBP4-215ENST00000625926 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
SSBP4-215ENST00000625926 GPAT2Q6NUI2 795 aa13.19□□□□□ -0.3
SSBP4-215ENST00000625926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
SSBP4-215ENST00000625926 PARK7Q99497 189 aaKnown RBP13.19□□□□□ -0.3
SSBP4-215ENST00000625926 BCL11AQ9H165 835 aa13.19□□□□□ -0.3
SSBP4-215ENST00000625926 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
SSBP4-215ENST00000625926 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
SSBP4-215ENST00000625926 FLT1P17948 1338 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 TRIM75PA6NK02 468 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 GNRH1P01148 92 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 CAP2P40123 477 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
SSBP4-215ENST00000625926 CAP1Q01518 475 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
SSBP4-215ENST00000625926 MIGA1Q8NAN2 632 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 TBC1D2Q9BYX2 928 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
SSBP4-215ENST00000625926 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 CYP2C8P10632 490 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 USP5P45974 858 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 GADL1Q6ZQY3 521 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
SSBP4-215ENST00000625926 METTL16Q86W50 562 aaKnown RBP13.17□□□□□ -0.3
SSBP4-215ENST00000625926 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
SSBP4-215ENST00000625926 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
SSBP4-215ENST00000625926 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 GOLIM4O00461 696 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 SPP2Q13103 211 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 RRP1BQ14684 758 aaKnown RBP13.16□□□□□ -0.3
SSBP4-215ENST00000625926 SLC9C2Q5TAH2 1124 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 ARMC5Q96C12 935 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 DNAJC2Q99543 621 aaKnown RBP13.16□□□□□ -0.3
SSBP4-215ENST00000625926 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 AS3MTQ9HBK9 375 aa13.16□□□□□ -0.3
SSBP4-215ENST00000625926 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
SSBP4-215ENST00000625926 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 ASNSP08243 561 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 ATP5JP18859 108 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 HOXD10P28358 340 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 PSMC4P43686 418 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 PRMT2P55345 433 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 BOLA2Q9H3K6 86 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
SSBP4-215ENST00000625926 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
SSBP4-215ENST00000625926 BCRP11274 1271 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 PDE6AP16499 860 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
SSBP4-215ENST00000625926 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
SSBP4-215ENST00000625926 RIOK1Q9BRS2 568 aaKnown RBP13.14□□□□□ -0.31
SSBP4-215ENST00000625926 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 PAG1Q9NWQ8 432 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
SSBP4-215ENST00000625926 ZNF532Q9HCE3 1301 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
SSBP4-215ENST00000625926 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.31
SSBP4-215ENST00000625926 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 TRIM47Q96LD4 638 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 HAUS7Q99871 368 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 CRNKL1Q9BZJ0 848 aaKnown RBP13.13□□□□□ -0.31
SSBP4-215ENST00000625926 EHD4Q9H223 541 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 DCTPP1Q9H773 170 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 SRRDQ9UH36 339 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
SSBP4-215ENST00000625926 A0A0C4DFX4 3053 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-215ENST00000625926 GDF11O95390 407 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
SSBP4-215ENST00000625926 CTGFP29279 349 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 HMGCS2P54868 508 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 FCGRTP55899 365 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 JAG1P78504 1218 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 TATDN1Q6P1N9 297 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 EDC3Q96F86 508 aaKnown RBP13.12□□□□□ -0.31
SSBP4-215ENST00000625926 ZNF333Q96JL9 665 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.12□□□□□ -0.311e-8■■■■■ 29.3
SSBP4-215ENST00000625926 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
SSBP4-215ENST00000625926 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 C19orf81C9J6K1 198 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 OSBPP22059 807 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 BACE1P56817 501 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 MTMR2Q13614 643 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 TMOD4Q9NZQ9 345 aa13.11□□□□□ -0.31
SSBP4-215ENST00000625926 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms