RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 AATFQ9NY61 560 aaKnown RBP eCLIP23.49■■□□□ 1.35
ATG4B-226ENST00000625810 PTPRFP10586 1907 aa23.49■■□□□ 1.35
ATG4B-226ENST00000625810 FMNL1O95466 1100 aaPredicted RBP23.48■■□□□ 1.35
ATG4B-226ENST00000625810 CYP2E1P05181 493 aaPredicted RBP23.48■■□□□ 1.35
ATG4B-226ENST00000625810 PLCG2P16885 1265 aa23.48■■□□□ 1.35
ATG4B-226ENST00000625810 HOXD10P28358 340 aa23.48■■□□□ 1.35
ATG4B-226ENST00000625810 ZAP70P43403 619 aa23.48■■□□□ 1.35
ATG4B-226ENST00000625810 DBNLQ9UJU6 430 aaKnown RBP23.48■■□□□ 1.35
ATG4B-226ENST00000625810 TRIM75PA6NK02 468 aa23.47■■□□□ 1.35
ATG4B-226ENST00000625810 CCDC84Q86UT8 332 aaPredicted RBP23.47■■□□□ 1.35
ATG4B-226ENST00000625810 EAF2Q96CJ1 260 aaPredicted RBP23.47■■□□□ 1.35
ATG4B-226ENST00000625810 TLR7Q9NYK1 1049 aaKnown RBP23.47■■□□□ 1.35
ATG4B-226ENST00000625810 SLC45A1Q9Y2W3 748 aa23.47■■□□□ 1.35
ATG4B-226ENST00000625810 MYPNQ86TC9 1320 aa23.47■■□□□ 1.35
ATG4B-226ENST00000625810 MAST2Q6P0Q8 1798 aa23.46■■□□□ 1.35
ATG4B-226ENST00000625810 EXOC6BQ9Y2D4 811 aa23.46■■□□□ 1.35
ATG4B-226ENST00000625810 IGSF3O75054 1194 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 FCGRTP55899 365 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 PPP4CP60510 307 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 MTFR1Q15390 333 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 ERC1Q8IUD2 1116 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 RAET1EQ8TD07 263 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 DHX36Q9H2U1 1008 aaKnown RBP23.45■■□□□ 1.34
ATG4B-226ENST00000625810 PIH1D3Q9NQM4 214 aaKnown RBP23.45■■□□□ 1.34
ATG4B-226ENST00000625810 PI4KBQ9UBF8 816 aa23.45■■□□□ 1.34
ATG4B-226ENST00000625810 HERC5Q9UII4 1024 aaKnown RBP23.45■■□□□ 1.34
ATG4B-226ENST00000625810 MYO5AQ9Y4I1 1855 aaKnown RBP23.45■■□□□ 1.34
ATG4B-226ENST00000625810 PRKCZQ05513 592 aa23.44■■□□□ 1.34
ATG4B-226ENST00000625810 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
ATG4B-226ENST00000625810 TGFBRAP1Q8WUH2 860 aa23.44■■□□□ 1.34
ATG4B-226ENST00000625810 GCC1Q96CN9 775 aa23.44■■□□□ 1.34
ATG4B-226ENST00000625810 GRK4P32298 578 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 CAP2P40123 477 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 HSP90AB4PQ58FF6 505 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 ADGRA1Q86SQ6 560 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 AACSQ86V21 672 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 SMCR8Q8TEV9 937 aaPredicted RBP23.43■■□□□ 1.34
ATG4B-226ENST00000625810 AGTPBP1Q9UPW5 1226 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 MGAMO43451 1857 aa23.43■■□□□ 1.34
ATG4B-226ENST00000625810 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
ATG4B-226ENST00000625810 CYP7A1P22680 504 aa23.42■■□□□ 1.34
ATG4B-226ENST00000625810 SPP2Q13103 211 aa23.42■■□□□ 1.34
ATG4B-226ENST00000625810 RRP1BQ14684 758 aaKnown RBP23.42■■□□□ 1.34
ATG4B-226ENST00000625810 SHISA4Q96DD7 197 aa23.42■■□□□ 1.34
ATG4B-226ENST00000625810 TRIM34Q9BYJ4 488 aa23.42■■□□□ 1.34
ATG4B-226ENST00000625810 TBC1D2Q9BYX2 928 aa23.42■■□□□ 1.34
ATG4B-226ENST00000625810 SIPA1L1O43166 1804 aa23.41■■□□□ 1.34
ATG4B-226ENST00000625810 TREML2Q5T2D2 321 aa23.41■■□□□ 1.34
ATG4B-226ENST00000625810 CRACR2BQ8N4Y2 399 aaPredicted RBP23.41■■□□□ 1.34
ATG4B-226ENST00000625810 ZNF280CQ8ND82 737 aa23.41■■□□□ 1.34
ATG4B-226ENST00000625810 GABRQQ9UN88 632 aa23.41■■□□□ 1.34
ATG4B-226ENST00000625810 LOC285556D6RIA3 1793 aa23.41■■□□□ 1.34
ATG4B-226ENST00000625810 ATAD5Q96QE3 1844 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 FLT1P17948 1338 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 USP17L5A8MUK1 530 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 DYNLL1P63167 89 aaKnown RBP23.4■■□□□ 1.34
ATG4B-226ENST00000625810 FOXP4Q8IVH2 680 aaPredicted RBP23.4■■□□□ 1.34
ATG4B-226ENST00000625810 AS3MTQ9HBK9 375 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 PNMA3Q9UL41 463 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 DDX19BQ9UMR2 479 aa23.4■■□□□ 1.34
ATG4B-226ENST00000625810 PROCA1Q8NCQ7 364 aaPredicted RBP23.39■■□□□ 1.33
ATG4B-226ENST00000625810 IL1RAPL2Q9NP60 686 aa23.39■■□□□ 1.33
ATG4B-226ENST00000625810 PALD1Q9ULE6 856 aa23.39■■□□□ 1.33
ATG4B-226ENST00000625810 COG6Q9Y2V7 657 aa23.39■■□□□ 1.33
ATG4B-226ENST00000625810 NDUFB9Q9Y6M9 179 aa23.39■■□□□ 1.33
ATG4B-226ENST00000625810 HMMRO75330 724 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 HLA-DOAP06340 250 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 CCL5P13501 91 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 MAP3K12Q12852 859 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 HABP4Q5JVS0 413 aaKnown RBP23.38■■□□□ 1.33
ATG4B-226ENST00000625810 RPAP2Q8IXW5 612 aaPredicted RBP23.38■■□□□ 1.33
ATG4B-226ENST00000625810 MAGEB6Q8N7X4 407 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 SLAIN1Q8ND83 568 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 RHPN1Q8TCX5 695 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 PCDH10Q9P2E7 1040 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 BIN2Q9UBW5 565 aaPredicted RBP23.38■■□□□ 1.33
ATG4B-226ENST00000625810 SAP30BPQ9UHR5 308 aaKnown RBP23.38■■□□□ 1.33
ATG4B-226ENST00000625810 CDK5RAP2Q96SN8 1893 aa23.38■■□□□ 1.33
ATG4B-226ENST00000625810 APBB1O00213 710 aa23.37■■□□□ 1.33
ATG4B-226ENST00000625810 HMGCS2P54868 508 aa23.37■■□□□ 1.33
ATG4B-226ENST00000625810 PABPC4Q13310 644 aaKnown RBP eCLIP23.37■■□□□ 1.33
ATG4B-226ENST00000625810 MIGA1Q8NAN2 632 aa23.37■■□□□ 1.33
ATG4B-226ENST00000625810 BCL11AQ9H165 835 aa23.37■■□□□ 1.33
ATG4B-226ENST00000625810 CHMP4BQ9H444 224 aaKnown RBP23.37■■□□□ 1.33
ATG4B-226ENST00000625810 FOCADQ5VW36 1801 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 ASNSP08243 561 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 USP5P45974 858 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 FLT3LGP49771 235 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 CERS3Q8IU89 383 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 CLASRPQ8N2M8 674 aaKnown RBP23.36■■□□□ 1.33
ATG4B-226ENST00000625810 ANKRD13CQ8N6S4 541 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 ANTXR1Q9H6X2 564 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 DNAJC18Q9H819 358 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 CEP290O15078 2479 aa23.36■■□□□ 1.33
ATG4B-226ENST00000625810 TNPO2O14787 897 aaKnown RBP23.35■■□□□ 1.33
ATG4B-226ENST00000625810 ADCY3O60266 1144 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 GJB1P08034 283 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 GJA8P48165 433 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 UBXN2AP68543 259 aa23.35■■□□□ 1.33
ATG4B-226ENST00000625810 NKX2-3Q8TAU0 364 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms