RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 DIXDC1Q155Q3 683 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 CKAP2LQ8IYA6 745 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 TCEANC2Q96MN5 208 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 RIOK1Q9BRS2 568 aaKnown RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 RTFDC1Q9BY42 306 aaPredicted RBP20.44■□□□□ 0.86
PCF11-207ENST00000624931 CLIP2Q9UDT6 1046 aa20.44■□□□□ 0.86
PCF11-207ENST00000624931 STX1AQ16623 288 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 AOC3Q16853 763 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 KCNQ5Q9NR82 932 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 OGFRQ9NZT2 677 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 TFIP11Q9UBB9 837 aaKnown RBP20.43■□□□□ 0.86
PCF11-207ENST00000624931 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
PCF11-207ENST00000624931 TNNT1P13805 278 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 SPTY2D1Q68D10 685 aaPredicted RBP20.42■□□□□ 0.86
PCF11-207ENST00000624931 SMARCC2Q8TAQ2 1214 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 ZNF396Q96N95 335 aaPredicted RBP20.42■□□□□ 0.86
PCF11-207ENST00000624931 RCOR1Q9UKL0 485 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 SLC4A4Q9Y6R1 1079 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 FAM205AQ6ZU69 1335 aa20.42■□□□□ 0.86
PCF11-207ENST00000624931 ZNF646O15015 1829 aaPredicted RBP20.42■□□□□ 0.86
PCF11-207ENST00000624931 GSG1L2A8MUP6 293 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 TGFB2P61812 414 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 CCDC112Q8NEF3 446 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 NBPF3Q9H094 633 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 KCND1Q9NSA2 647 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 AATFQ9NY61 560 aaKnown RBP eCLIP20.41■□□□□ 0.86
PCF11-207ENST00000624931 G3V3G9 751 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 KIF2AO00139 706 aaPredicted RBP20.41■□□□□ 0.86
PCF11-207ENST00000624931 NR1I2O75469 434 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 DCAF8Q5TAQ9 597 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 CERS5Q8N5B7 392 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 TSC1Q92574 1164 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 BRF1Q92994 677 aa20.41■□□□□ 0.86
PCF11-207ENST00000624931 MYH2Q9UKX2 1941 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 COL4A5P29400 1685 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 ECE2O60344 883 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 PFKFB2O60825 505 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 IFNL3Q8IZI9 196 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 ANO10Q9NW15 660 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 PIM2Q9P1W9 311 aa20.4■□□□□ 0.86
PCF11-207ENST00000624931 PATL2C9JE40 543 aaKnown RBP20.39■□□□□ 0.86
PCF11-207ENST00000624931 E7EWF7 191 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 CBX1P83916 185 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 IQCB1Q15051 598 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 TPD52L1Q16890 204 aaPredicted RBP20.39■□□□□ 0.86
PCF11-207ENST00000624931 CC2D2BQ6DHV5 1058 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 FAM173BQ6P4H8 233 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 DNAJC25Q9H1X3 360 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 CTNNA3Q9UI47 895 aa20.39■□□□□ 0.86
PCF11-207ENST00000624931 PPIP5K2O43314 1243 aa20.39■□□□□ 0.85
PCF11-207ENST00000624931 IMMTQ16891 758 aaKnown RBP20.39■□□□□ 0.85
PCF11-207ENST00000624931 CCDC73Q6ZRK6 1079 aa20.39■□□□□ 0.85
PCF11-207ENST00000624931 TBC1D10CQ8IV04 446 aa20.39■□□□□ 0.85
PCF11-207ENST00000624931 NLGN2Q8NFZ4 835 aa20.39■□□□□ 0.85
PCF11-207ENST00000624931 NAT10Q9H0A0 1025 aaKnown RBP20.39■□□□□ 0.85
PCF11-207ENST00000624931 BAZ2AQ9UIF9 1905 aaKnown RBP20.38■□□□□ 0.85
PCF11-207ENST00000624931 F8W031 263 aaPredicted RBP20.38■□□□□ 0.85
PCF11-207ENST00000624931 TUBB4AP04350 444 aa20.38■□□□□ 0.85
PCF11-207ENST00000624931 GSDMDP57764 484 aa20.38■□□□□ 0.85
PCF11-207ENST00000624931 Q6ZUG5 572 aa20.38■□□□□ 0.85
PCF11-207ENST00000624931 LRRC8AQ8IWT6 810 aa20.38■□□□□ 0.85
PCF11-207ENST00000624931 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
PCF11-207ENST00000624931 ZNF277Q9NRM2 450 aaPredicted RBP20.38■□□□□ 0.85
PCF11-207ENST00000624931 SMIM22K7EJ46 135 aa20.37■□□□□ 0.85
PCF11-207ENST00000624931 NCBP1Q09161 790 aaKnown RBP20.37■□□□□ 0.85
PCF11-207ENST00000624931 TBC1D22AQ8WUA7 517 aa20.37■□□□□ 0.85
PCF11-207ENST00000624931 ARID3AQ99856 593 aa20.37■□□□□ 0.85
PCF11-207ENST00000624931 NAPBQ9H115 298 aa20.37■□□□□ 0.85
PCF11-207ENST00000624931 GNAT2P19087 354 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 TDO2P48775 406 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 STK3Q13188 491 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 ALX1Q15699 326 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
PCF11-207ENST00000624931 CEP135Q66GS9 1140 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 DHX32Q7L7V1 743 aaKnown RBP20.36■□□□□ 0.85
PCF11-207ENST00000624931 CACTINQ8WUQ7 758 aaKnown RBP20.36■□□□□ 0.85
PCF11-207ENST00000624931 LRRC2Q9BYS8 371 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 TACC3Q9Y6A5 838 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 MROH7-TTC4A0A0A0MT08 1334 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 BECN2A8MW95 431 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 ZNF213O14771 459 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 CTDSPL2Q05D32 466 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
PCF11-207ENST00000624931 RTKN2Q8IZC4 609 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 RGS22Q8NE09 1264 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 C16orf45Q96MC5 204 aaPredicted RBP20.36■□□□□ 0.85
PCF11-207ENST00000624931 INCENPQ9NQS7 918 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 IMPACTQ9P2X3 320 aa20.36■□□□□ 0.85
PCF11-207ENST00000624931 ZMYM6O95789 1325 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 CYP2D7A0A087X1C5 515 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
PCF11-207ENST00000624931 KINO60870 393 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms