RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 MTA3Q9BTC8 594 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 FAM198AQ9UFP1 575 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
SNORD3D-201ENST00000619178 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 ERICH2A1L162 156 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 E7EWF7 191 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 FOXP2O15409 715 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 MCM5P33992 734 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 CACNB3P54284 484 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 HAND2P61296 217 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 FGD1P98174 961 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 NFIAQ12857 509 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 RASA3Q14644 834 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 TRPM4Q8TD43 1214 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 PGAP2Q9UHJ9 254 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 PCDHAC2Q9Y5I4 1007 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
SNORD3D-201ENST00000619178 ORC4O43929 436 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 TBC1D12O60347 775 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 CNTNAP1P78357 1384 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 OTOFQ9HC10 1997 aa13.03□□□□□ -0.32
SNORD3D-201ENST00000619178 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 EGFRP00533 1210 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 MCM2P49736 904 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 RRP12Q5JTH9 1297 aaKnown RBP13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 RUFY3Q7L099 469 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 KRT26Q7Z3Y9 468 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 TMEM87BQ96K49 555 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
SNORD3D-201ENST00000619178 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 RANBP6O60518 1105 aaKnown RBP13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 FGRP09769 529 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 TSPY3P0CV98 308 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 TSPY8P0CW00 308 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 CDK8P49336 464 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 PLCD1P51178 756 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 DHX32Q7L7V1 743 aaKnown RBP13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 TMEM39BQ9GZU3 492 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
SNORD3D-201ENST00000619178 PAPPA2Q9BXP8 1791 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 DDTLA6NHG4 134 aaPredicted RBP13□□□□□ -0.33
SNORD3D-201ENST00000619178 NEK4P51957 841 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 BECN1Q14457 450 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
SNORD3D-201ENST00000619178 RASEFQ8IZ41 740 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 PTPRFP10586 1907 aa13□□□□□ -0.33
SNORD3D-201ENST00000619178 PHIPQ8WWQ0 1821 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 CYP2D7A0A087X1C5 515 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 POTECB2RU33 542 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 B4E1Z4 1266 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 KDM4AO75164 1064 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 CYP2D6P10635 497 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 RPS6KB1P23443 525 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 GABPAQ06546 454 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 SLC4A8Q2Y0W8 1093 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 CERKLQ49MI3 558 aaPredicted RBP12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 SYNE3Q6ZMZ3 975 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 TBC1D10CQ8IV04 446 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 ZNF526Q8TF50 670 aaPredicted RBP12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 ALDH8A1Q9H2A2 487 aaPredicted RBP12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNORD3D-201ENST00000619178 PLIN4Q96Q06 1357 aa12.98□□□□□ -0.33
SNORD3D-201ENST00000619178 NEDD4P46934 1319 aa12.98□□□□□ -0.33
SNORD3D-201ENST00000619178 ASNSP08243 561 aa12.98□□□□□ -0.33
SNORD3D-201ENST00000619178 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
SNORD3D-201ENST00000619178 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
SNORD3D-201ENST00000619178 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms