RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 LAMB1P07942 1786 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 ATRNL1Q5VV63 1379 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 FGRP09769 529 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 ZKSCAN1P17029 563 aaPredicted RBP8.9□□□□□ -0.98
VPS45-213ENST00000618148 KRT32Q14532 448 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 DLGAP5Q15398 846 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 IMMTQ16891 758 aaKnown RBP8.9□□□□□ -0.98
VPS45-213ENST00000618148 MICALL2Q8IY33 904 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 MYOZ2Q9NPC6 264 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 ARPP21Q9UBL0 812 aaPredicted RBP8.9□□□□□ -0.98
VPS45-213ENST00000618148 CNOT7Q9UIV1 285 aaKnown RBP8.9□□□□□ -0.98
VPS45-213ENST00000618148 PCDHAC2Q9Y5I4 1007 aa8.9□□□□□ -0.98
VPS45-213ENST00000618148 SHTN1A0MZ66 631 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 WNT10BO00744 389 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 APPP05067 770 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 PCP11498 1178 aaKnown RBP8.89□□□□□ -0.99
VPS45-213ENST00000618148 TDO2P48775 406 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 NT5C2P49902 561 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 RABEP1Q15276 862 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
VPS45-213ENST00000618148 CTR9Q6PD62 1173 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 STOX1Q6ZVD7 989 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 DDRGK1Q96HY6 314 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 DDX4Q9NQI0 724 aaKnown RBP8.89□□□□□ -0.99
VPS45-213ENST00000618148 USP40Q9NVE5 1235 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 FAM198AQ9UFP1 575 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 RBM19Q9Y4C8 960 aaKnown RBP8.89□□□□□ -0.99
VPS45-213ENST00000618148 GJA3Q9Y6H8 435 aa8.89□□□□□ -0.99
VPS45-213ENST00000618148 BAZ2AQ9UIF9 1905 aaKnown RBP8.89□□□□□ -0.99
VPS45-213ENST00000618148 WDR90Q96KV7 1748 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 GLTPD2A6NH11 291 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 USP17L21D6R901 530 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 ZNF213O14771 459 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 ENTPD3O75355 529 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 EGFRP00533 1210 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 NFIAQ12857 509 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 C12orf60Q5U649 245 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 FAM83AQ86UY5 434 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 TBC1D10CQ8IV04 446 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 TGFBRAP1Q8WUH2 860 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 STAG1Q8WVM7 1258 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 OSBPL5Q9H0X9 879 aaPredicted RBP8.88□□□□□ -0.99
VPS45-213ENST00000618148 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 E7EWF7 191 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 DDNO94850 711 aaPredicted RBP8.88□□□□□ -0.99
VPS45-213ENST00000618148 USP5P45974 858 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 RBM5P52756 815 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS45-213ENST00000618148 GABPAQ06546 454 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 PPARAQ07869 468 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 NBPF9Q3BBW0 867 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
VPS45-213ENST00000618148 MAPKAPK5Q8IW41 473 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 FBXL16Q8N461 479 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 EHD4Q9H223 541 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 TDRD3Q9H7E2 651 aaKnown RBP8.88□□□□□ -0.99
VPS45-213ENST00000618148 MCM9Q9NXL9 1143 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 ZNF70Q9UC06 446 aaPredicted RBP8.88□□□□□ -0.99
VPS45-213ENST00000618148 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.88□□□□□ -0.99
VPS45-213ENST00000618148 TACC3Q9Y6A5 838 aa8.88□□□□□ -0.99
VPS45-213ENST00000618148 CNTNAP1P78357 1384 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 SIPA1L1O43166 1804 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 SCN4AP35499 1836 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 MYH1P12882 1939 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 H7C1D1 291 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 ORC4O43929 436 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 PSMA5P28066 241 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 HAND2P61296 217 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 AKNAD1Q5T1N1 836 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 TTC14Q96N46 770 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 ALDH8A1Q9H2A2 487 aaPredicted RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 DHX36Q9H2U1 1008 aaKnown RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 RNF41Q9H4P4 317 aaPredicted RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
VPS45-213ENST00000618148 PGAP2Q9UHJ9 254 aa8.87□□□□□ -0.99
VPS45-213ENST00000618148 PITPNM2Q9BZ72 1349 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 CYP2D7A0A087X1C5 515 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 SMIM22K7EJ46 135 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 MYO1BO43795 1136 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 CYP2D6P10635 497 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 EPS15P42566 896 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 PLCD1P51178 756 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
VPS45-213ENST00000618148 SH3BP5LQ7L8J4 393 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 MB21D2Q8IYB1 491 aaPredicted RBP8.86□□□□□ -0.99
VPS45-213ENST00000618148 TRPM4Q8TD43 1214 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 FAM151AQ8WW52 585 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 SNX21Q969T3 373 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 JAKMIP1Q96N16 626 aaKnown RBP8.86□□□□□ -0.99
VPS45-213ENST00000618148 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 MTA3Q9BTC8 594 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 AGXT2Q9BYV1 514 aa8.86□□□□□ -0.99
VPS45-213ENST00000618148 CNNM2Q9H8M5 875 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms