RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 LRRN4CLQ8ND94 238 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ZSWIM5Q9P217 1185 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TACC3Q9Y6A5 838 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SMTNL1A8MU46 457 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ZBTB43O43298 467 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 PTPAQ15257 358 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 RIOK1Q9BRS2 568 aaKnown RBP12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANO10Q9NW15 660 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CPLX1O14810 134 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MBD4O95243 580 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ZNF75DP51815 510 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 PIP4K2BP78356 416 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NBPF11Q86T75 865 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NAPBQ9H115 298 aa12.51□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SPTLC2O15270 562 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MYO1BO43795 1136 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KIF18AQ8NI77 898 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NKX2-3Q8TAU0 364 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CDC27P30260 824 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANKRD7Q92527 254 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CCDC196A0A1B0GTZ2 297 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KIF28PB7ZC32 967 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TOM1O60784 492 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KINO60870 393 aaKnown RBP12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SEC31AO94979 1220 aaKnown RBP12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 BCAMP50895 628 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SEC23AQ15436 765 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 C15orf52Q6ZUT6 534 aaKnown RBP12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 FOXP1Q9H334 677 aaPredicted RBP12.5□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CCDC66A2RUB6 948 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NEMFO60524 1076 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SDF4Q9BRK5 362 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CLIC4Q9Y696 253 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 B4E1Z4 1266 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 RANBP6O60518 1105 aaKnown RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TERF2Q15554 542 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 C11orf57Q6ZUT1 292 aaPredicted RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 LCORLQ8N3X6 602 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ALG1Q9BT22 464 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TMEM67Q5HYA8 995 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KRT40Q6A162 431 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ZNF579Q8NAF0 562 aaKnown RBP12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 FEZ1Q99689 392 aa12.49□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 IARSP41252 1262 aaKnown RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 C10orf67Q8IYJ2 551 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 AOPEPQ8N6M6 819 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SPATA31A6Q5VVP1 1343 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ARHGAP29Q52LW3 1261 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 HELBQ8NG08 1087 aaPredicted RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SLC12A7Q9Y666 1083 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SLC4A4Q9Y6R1 1079 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ME1P48163 572 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 PPARAQ07869 468 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 RESP18Q5W5W9 173 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ACSBG1Q96GR2 724 aa12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 FAM84BQ96KN1 310 aaPredicted RBP12.48□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ORC4O43929 436 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ONECUT3O60422 494 aaPredicted RBP12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CUTAO60888 179 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 STK38Q15208 465 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 CAVIN4Q5BKX8 364 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 TMC6Q7Z403 805 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 VPS37DQ86XT2 251 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 IKBKBO14920 756 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 DEXIO95424 95 aa12.47□□□□□ -0.41
SENP3-EIF4A1-201ENST00000614237 ADAMTS2O95450 1211 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1540.4 ms