RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ZMYM3Q14202 1370 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 RIOK3O14730 519 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 STK10O94804 968 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 LETM2Q2VYF4 491 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 EYA1Q99502 592 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 PLCB1Q9NQ66 1216 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 KDM2BQ8NHM5 1336 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 HOXC9P31274 260 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 NEDD9Q14511 834 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 BACH1O14867 736 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 BUB1BO60566 1050 aaPredicted RBP19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 CHST3Q7LGC8 479 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 VCX3BQ9H321 246 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 A0A1W2PP64 1363 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 TTC38Q5R3I4 469 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 ZNF365Q70YC5 407 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 TNNQ9UQP3 1299 aa19.41■□□□□ 0.7
HMGXB3-206ENST00000613459 SGSM2O43147 1006 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 TOM1O60784 492 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 TSNAXIP1Q2TAA8 658 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 RPUSD2Q8IZ73 545 aaKnown RBP19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 ARHGAP24Q8N264 748 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 ZKSCAN3Q9BRR0 538 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 TM6SF1Q9BZW5 370 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 FEZ2Q9UHY8 353 aaPredicted RBP19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 EDC4Q6P2E9 1401 aaKnown RBP19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 PAK2Q13177 524 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 SSH2Q76I76 1423 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 CCDC84Q86UT8 332 aaPredicted RBP19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 SMC1BQ8NDV3 1235 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 CDAN1Q8IWY9 1227 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■■■■■ 42.5
HMGXB3-206ENST00000613459 JDP2Q8WYK2 163 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 AGTPBP1Q9UPW5 1226 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 KIF3CO14782 793 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 PCK1P35558 622 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 MCTP2Q6DN12 878 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 MIPOL1Q8TD10 442 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 HOOK2Q96ED9 719 aa19.4■□□□□ 0.7
HMGXB3-206ENST00000613459 PDE8AO60658 829 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 FAM212AQ96EL1 285 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 BIRC3Q13489 604 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 NSFL1CQ9UNZ2 370 aaKnown RBP19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 GNA14O95837 355 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 HPDP32754 393 aaPredicted RBP19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 NONOQ15233 471 aaKnown RBP eCLIP19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 VEZTQ9HBM0 779 aa19.39■□□□□ 0.69
HMGXB3-206ENST00000613459 KRT5P13647 590 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 CLNS1AP54105 237 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 LGSNQ5TDP6 509 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 PARP2Q9UGN5 583 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 TRAPPC8Q9Y2L5 1435 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 KBTBD3Q8NAB2 608 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 FLOT1O75955 427 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 HIBADHP31937 336 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 STRN3Q13033 797 aa19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 DIS3L2Q8IYB7 885 aaKnown RBP19.38■□□□□ 0.69
HMGXB3-206ENST00000613459 CCT6BQ92526 530 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 CARD14Q9BXL6 1004 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 HAUS2Q9NVX0 235 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 B4E1Z4 1266 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 PPFIA1Q13136 1202 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 PLS1Q14651 629 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 CASQ2O14958 399 aaPredicted RBP19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 E7EVH7 732 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 PPP2R5EQ16537 467 aa19.37■□□□□ 0.69
HMGXB3-206ENST00000613459 GCP02774 474 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 VPS52Q8N1B4 723 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 DSCC1Q9BVC3 393 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 TMOD4Q9NZQ9 345 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 ARHGEF35A5YM69 484 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 GOLGA6BA6NDN3 693 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 ADCY7P51828 1080 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 MAP7Q14244 749 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 RBM26Q5T8P6 1007 aaKnown RBP19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 VPS16Q9H269 839 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 ELF2Q15723 593 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 CARD6Q9BX69 1037 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 CLGNO14967 610 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 KIFC2Q96AC6 838 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 CBX8Q9HC52 389 aa19.36■□□□□ 0.69
HMGXB3-206ENST00000613459 BCRP11274 1271 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 CFAP221Q4G0U5 840 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 CEP120Q8N960 986 aa19.35■□□□□ 0.69
HMGXB3-206ENST00000613459 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms