RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 CLEC4GQ6UXB4 293 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 RPAINQ86UA6 219 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 ZFYVE28Q9HCC9 887 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 SMC4Q9NTJ3 1288 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 PRKAG2Q9UGJ0 569 aa7.12□□□□□ -1.27
LSM1P2-201ENST00000604911 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 CCDC66A2RUB6 948 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 MPHOSPH10O00566 681 aaKnown RBP7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 SH3BP5O60239 455 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 IPO7O95373 1038 aaKnown RBP7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 GSTM4Q03013 218 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 NFKBIBQ15653 356 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 ZAR1Q86SH2 424 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 METTL14Q9HCE5 456 aaKnown RBP7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 BRMS1Q9HCU9 246 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 DONSONQ9NYP3 566 aa7.11□□□□□ -1.27
LSM1P2-201ENST00000604911 KLHL33A6NCF5 533 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 ADH5P11766 374 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 USP11P51784 963 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 PSMC1P62191 440 aaKnown RBP7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 SF3B2Q13435 895 aaKnown RBP7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 ZNF423Q2M1K9 1284 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 HSP90AB2PQ58FF8 381 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 DNAJC14Q6Y2X3 702 aaPredicted RBP7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 TCF12Q99081 682 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 CCDC87Q9NVE4 849 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 ANGEL1Q9UNK9 670 aaKnown RBP7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 UNC13AQ9UPW8 1703 aa7.1□□□□□ -1.27
LSM1P2-201ENST00000604911 A0A096LPE4 126 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 A0A1W2PPZ6 126 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 CREB3O43889 395 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 CTSBP07858 339 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 FKBP4Q02790 459 aaKnown RBP eCLIP7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 COL19A1Q14993 1142 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 CREBRFQ8IUR6 639 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 ATL2Q8NHH9 583 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 BORCS6Q96GS4 357 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 CLEC4MQ9H2X3 399 aaPredicted RBP7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 RAD54L2Q9Y4B4 1467 aa7.09□□□□□ -1.27
LSM1P2-201ENST00000604911 A0A1W2PP55 124 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 PPP1R12AO14974 1030 aaPredicted RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 EIF3JO75822 258 aaKnown RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 POLR3DP05423 398 aaPredicted RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 GRIA4P48058 902 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 NEXNQ0ZGT2 675 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 GALNT12Q8IXK2 581 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 EVI5LQ96CN4 794 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 FBXL18Q96ME1 805 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 TBC1D32Q96NH3 1257 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 MAF1Q9H063 256 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 TMX4Q9H1E5 349 aaPredicted RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 RANBP17Q9H2T7 1088 aaKnown RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 MED4Q9NPJ6 270 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 IGSF5Q9NSI5 407 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 PNMA2Q9UL42 364 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 ACTL7BQ9Y614 415 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 COMMD10Q9Y6G5 202 aa7.08□□□□□ -1.28
LSM1P2-201ENST00000604911 FAM170BA6NMN3 283 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 CYP26A1O43174 497 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 PPP1R15AO75807 674 aaPredicted RBP7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 MAOBP27338 520 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 KCNA1Q09470 495 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 TBC1D10BQ4KMP7 808 aaPredicted RBP7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 CT47A1Q5JQC4 288 aaPredicted RBP7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 FRAT1Q92837 279 aaPredicted RBP7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 YIPF2Q9BWQ6 316 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 PAXBP1Q9Y5B6 917 aa7.07□□□□□ -1.28
LSM1P2-201ENST00000604911 TULP2O00295 520 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 PEX14O75381 377 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 CYP11A1P05108 521 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 ITGB5P18084 799 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 TDO2P48775 406 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 TRDNQ13061 729 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 SPRED3Q2MJR0 410 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 C1QTNF12Q5T7M4 302 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 SEZ6L2Q6UXD5 910 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 AMOTL1Q8IY63 956 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 JMYQ8N9B5 988 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 ERCC4Q92889 916 aaPredicted RBP7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 IRF2BPLQ9H1B7 796 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 SEMA6CQ9H3T2 930 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 ACSS3Q9H6R3 686 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 CWC25Q9NXE8 425 aaPredicted RBP7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 STK26Q9P289 416 aa7.06□□□□□ -1.28
LSM1P2-201ENST00000604911 TPM3P06753 285 aa7.05□□□□□ -1.28
LSM1P2-201ENST00000604911 NFICP08651 508 aa7.05□□□□□ -1.28
LSM1P2-201ENST00000604911 SETSIPP0DME0 302 aa7.05□□□□□ -1.28
LSM1P2-201ENST00000604911 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms